© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|7437 |
| Gene name | |
| Location | Contig_868:2303..2930 |
| Strand | - |
| Gene length (bp) | 627 |
| Transcript length (bp) | 627 |
| Coding sequence length (bp) | 627 |
| Protein length (aa) | 209 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00011 | HSP20 | Hsp20/alpha crystallin family | 8.7E-13 | 146 | 208 |
| PF17886 | ArsA_HSP20 | HSP20-like domain found in ArsA | 3.4E-06 | 55 | 192 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P19752|HSP30_NEUCR | 30 kDa heat shock protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=hsp30 PE=3 SV=1 | 1 | 208 | 4.0E-63 |
| sp|P40920|HSP30_EMENI | 30 kDa heat shock protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hsp30 PE=2 SV=1 | 15 | 207 | 2.0E-43 |
| sp|Q4UJB1|HSPC4_RICFE | Small heat shock protein C4 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspc4-1 PE=3 SV=1 | 148 | 207 | 9.0E-10 |
| sp|Q8MPA7|HSPG5_DICDI | Small heat shock protein hspG5 OS=Dictyostelium discoideum GN=hspG5 PE=2 SV=2 | 25 | 208 | 3.0E-06 |
| sp|Q4UKR8|HSPC2_RICFE | Small heat shock protein C2 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspC2 PE=3 SV=1 | 156 | 207 | 3.0E-06 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P19752|HSP30_NEUCR | 30 kDa heat shock protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=hsp30 PE=3 SV=1 | 1 | 208 | 4.0E-63 |
| sp|P40920|HSP30_EMENI | 30 kDa heat shock protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hsp30 PE=2 SV=1 | 15 | 207 | 2.0E-43 |
| sp|Q4UJB1|HSPC4_RICFE | Small heat shock protein C4 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspc4-1 PE=3 SV=1 | 148 | 207 | 9.0E-10 |
| sp|Q8MPA7|HSPG5_DICDI | Small heat shock protein hspG5 OS=Dictyostelium discoideum GN=hspG5 PE=2 SV=2 | 25 | 208 | 3.0E-06 |
| sp|Q4UKR8|HSPC2_RICFE | Small heat shock protein C2 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspC2 PE=3 SV=1 | 156 | 207 | 3.0E-06 |
| sp|P12811|HS22C_CHLRE | Heat shock 22 kDa protein, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1 | 142 | 208 | 4.0E-06 |
| sp|Q86H60|HSPK_DICDI | Small heat shock protein hspK OS=Dictyostelium discoideum GN=hspK PE=3 SV=1 | 45 | 207 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7437 MAFFPRNCYNADSSFTPLFRLLDDFDSYSRQNDASSSRRSGLPSWQPKFDIREVNDHYELHGDLPGVNKDQVHIE FTDPQTMLVRGRVERAYSAGSPPAGHIEDVSNGGAITEGEDSKLPHKATVEDEGSEQSKQSSEDSVEKKLAEKKA PSTGKWWLTERSVGEFSRSFNFPSRIEQEAVTASFKDGVLNIVVPKAKKRESRRIPIN* |
| Coding | >OphauG2|7437 ATGGCTTTCTTTCCTCGCAACTGCTACAATGCCGACTCGTCCTTCACTCCTCTCTTCCGCCTGCTCGACGACTTT GACAGCTATAGTCGACAGAACGATGCATCATCTTCTCGACGCTCTGGCCTGCCCTCTTGGCAGCCAAAGTTTGAC ATCCGCGAGGTGAACGACCATTATGAGCTTCACGGCGACCTGCCCGGTGTCAACAAAGATCAAGTGCACATTGAG TTCACCGATCCCCAGACTATGCTGGTACGCGGCCGTGTCGAGCGTGCCTATTCGGCTGGCTCGCCGCCCGCCGGC CATATTGAGGATGTGAGCAATGGCGGTGCCATTACCGAAGGCGAGGATTCCAAACTGCCGCACAAGGCCACCGTT GAGGATGAAGGCTCCGAGCAAAGCAAGCAAAGCTCTGAAGATAGCGTTGAGAAGAAGCTGGCTGAAAAGAAAGCG CCGAGCACAGGCAAGTGGTGGCTCACAGAGCGCAGCGTTGGCGAGTTCTCACGAAGCTTCAATTTTCCTTCGCGC ATTGAACAAGAAGCCGTCACAGCCTCTTTCAAGGACGGCGTCTTGAACATTGTTGTGCCCAAGGCTAAGAAGCGC GAGTCTCGCCGCATTCCCATCAATTAG |
| Transcript | >OphauG2|7437 ATGGCTTTCTTTCCTCGCAACTGCTACAATGCCGACTCGTCCTTCACTCCTCTCTTCCGCCTGCTCGACGACTTT GACAGCTATAGTCGACAGAACGATGCATCATCTTCTCGACGCTCTGGCCTGCCCTCTTGGCAGCCAAAGTTTGAC ATCCGCGAGGTGAACGACCATTATGAGCTTCACGGCGACCTGCCCGGTGTCAACAAAGATCAAGTGCACATTGAG TTCACCGATCCCCAGACTATGCTGGTACGCGGCCGTGTCGAGCGTGCCTATTCGGCTGGCTCGCCGCCCGCCGGC CATATTGAGGATGTGAGCAATGGCGGTGCCATTACCGAAGGCGAGGATTCCAAACTGCCGCACAAGGCCACCGTT GAGGATGAAGGCTCCGAGCAAAGCAAGCAAAGCTCTGAAGATAGCGTTGAGAAGAAGCTGGCTGAAAAGAAAGCG CCGAGCACAGGCAAGTGGTGGCTCACAGAGCGCAGCGTTGGCGAGTTCTCACGAAGCTTCAATTTTCCTTCGCGC ATTGAACAAGAAGCCGTCACAGCCTCTTTCAAGGACGGCGTCTTGAACATTGTTGTGCCCAAGGCTAAGAAGCGC GAGTCTCGCCGCATTCCCATCAATTAG |
| Gene | >OphauG2|7437 ATGGCTTTCTTTCCTCGCAACTGCTACAATGCCGACTCGTCCTTCACTCCTCTCTTCCGCCTGCTCGACGACTTT GACAGCTATAGTCGACAGAACGATGCATCATCTTCTCGACGCTCTGGCCTGCCCTCTTGGCAGCCAAAGTTTGAC ATCCGCGAGGTGAACGACCATTATGAGCTTCACGGCGACCTGCCCGGTGTCAACAAAGATCAAGTGCACATTGAG TTCACCGATCCCCAGACTATGCTGGTACGCGGCCGTGTCGAGCGTGCCTATTCGGCTGGCTCGCCGCCCGCCGGC CATATTGAGGATGTGAGCAATGGCGGTGCCATTACCGAAGGCGAGGATTCCAAACTGCCGCACAAGGCCACCGTT GAGGATGAAGGCTCCGAGCAAAGCAAGCAAAGCTCTGAAGATAGCGTTGAGAAGAAGCTGGCTGAAAAGAAAGCG CCGAGCACAGGCAAGTGGTGGCTCACAGAGCGCAGCGTTGGCGAGTTCTCACGAAGCTTCAATTTTCCTTCGCGC ATTGAACAAGAAGCCGTCACAGCCTCTTTCAAGGACGGCGTCTTGAACATTGTTGTGCCCAAGGCTAAGAAGCGC GAGTCTCGCCGCATTCCCATCAATTAG |