Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|742
Gene name
LocationContig_1190:3502..4413
Strand+
Gene length (bp)911
Transcript length (bp)846
Coding sequence length (bp)846
Protein length (aa) 282

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 4.7E-19 28 200
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.6E-11 39 215

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q3T0C2|PGDH_BOVIN 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Bos taurus GN=HPGD PE=2 SV=1 41 252 8.0E-08
sp|Q8VCC1|PGDH_MOUSE 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Mus musculus GN=Hpgd PE=1 SV=1 41 253 8.0E-08
sp|P70684|PGDH_CAVPO 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Cavia porcellus GN=HPGD PE=2 SV=1 41 252 1.0E-07
sp|Q8MJY8|PGDH_MACFA 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Macaca fascicularis GN=HPGD PE=2 SV=1 41 252 2.0E-07
sp|P15428|PGDH_HUMAN 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Homo sapiens GN=HPGD PE=1 SV=1 41 252 7.0E-07
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q3T0C2|PGDH_BOVIN 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Bos taurus GN=HPGD PE=2 SV=1 41 252 8.0E-08
sp|Q8VCC1|PGDH_MOUSE 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Mus musculus GN=Hpgd PE=1 SV=1 41 253 8.0E-08
sp|P70684|PGDH_CAVPO 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Cavia porcellus GN=HPGD PE=2 SV=1 41 252 1.0E-07
sp|Q8MJY8|PGDH_MACFA 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Macaca fascicularis GN=HPGD PE=2 SV=1 41 252 2.0E-07
sp|P15428|PGDH_HUMAN 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Homo sapiens GN=HPGD PE=1 SV=1 41 252 7.0E-07
sp|O42866|FABG_SCHPO 3-oxoacyl-[acyl-carrier-protein] reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oar2 PE=3 SV=1 103 240 8.0E-07
sp|G5DGA8|IDLDH_IPSPI Ipsdienol dehydrogenase OS=Ips pini GN=IDOLDH PE=1 SV=1 43 199 2.0E-06
sp|O08699|PGDH_RAT 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Rattus norvegicus GN=Hpgd PE=2 SV=2 41 252 2.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|742
MADLRLNPEAIELLNTYAPRGTEDANSRKDINGHGRPTAHFHKTDVTSWPQLLALWEATLAAFPSINIVVPGAGI
YELGKNSFWDAPKSKTNPNSNSQDAADSEPGNYNLININLVAPIRLSQLAIGYWTQKKERTPGDANLLLFGSLAG
RCQVLPTPLYVASKHGIHGFARSLGPLRDSIGIRVGCIAPGPVRTELFKGYEVMLKDAETIPTRQVADAMMQLVV
NDAYGDGTILEIYPGKTYVVPVFNAAPIGEEEFTFPGLGVWNDQILGNLGTNGLQV*
Coding >OphauG2|742
ATGGCCGACCTCAGGCTCAATCCCGAGGCCATTGAACTACTCAATACCTACGCACCGCGAGGTACCGAGGATGCC
AACAGCCGCAAGGATATCAACGGCCATGGACGCCCTACGGCGCATTTCCACAAGACTGATGTGACATCATGGCCG
CAGCTTTTGGCTCTATGGGAGGCAACGCTGGCCGCATTTCCCTCCATAAACATTGTCGTTCCTGGCGCAGGAATA
TACGAACTAGGCAAGAACAGCTTTTGGGACGCCCCCAAATCAAAGACAAACCCAAATAGCAATTCGCAAGATGCC
GCAGACAGTGAGCCAGGCAATTACAATCTTATCAACATCAATCTCGTCGCTCCCATCCGGTTGAGCCAGCTGGCC
ATTGGATACTGGACGCAGAAAAAGGAGCGCACACCGGGCGATGCCAATCTGCTATTGTTTGGTAGCTTGGCAGGC
CGCTGTCAGGTCCTACCAACACCACTATACGTTGCCAGCAAGCATGGTATACATGGATTTGCAAGGTCACTTGGT
CCCTTGCGTGATAGCATTGGAATTCGCGTCGGCTGCATAGCCCCAGGCCCAGTCAGAACCGAACTCTTCAAGGGT
TACGAAGTGATGCTTAAGGATGCCGAAACGATTCCTACCCGCCAAGTGGCAGACGCCATGATGCAGCTAGTAGTC
AATGACGCGTACGGCGACGGCACCATCCTTGAGATATATCCAGGCAAGACATATGTCGTTCCGGTATTCAATGCG
GCTCCCATAGGTGAGGAGGAATTTACATTTCCCGGCCTGGGAGTCTGGAACGACCAGATCCTCGGCAATCTTGGC
ACCAACGGTCTTCAGGTGTGA
Transcript >OphauG2|742
ATGGCCGACCTCAGGCTCAATCCCGAGGCCATTGAACTACTCAATACCTACGCACCGCGAGGTACCGAGGATGCC
AACAGCCGCAAGGATATCAACGGCCATGGACGCCCTACGGCGCATTTCCACAAGACTGATGTGACATCATGGCCG
CAGCTTTTGGCTCTATGGGAGGCAACGCTGGCCGCATTTCCCTCCATAAACATTGTCGTTCCTGGCGCAGGAATA
TACGAACTAGGCAAGAACAGCTTTTGGGACGCCCCCAAATCAAAGACAAACCCAAATAGCAATTCGCAAGATGCC
GCAGACAGTGAGCCAGGCAATTACAATCTTATCAACATCAATCTCGTCGCTCCCATCCGGTTGAGCCAGCTGGCC
ATTGGATACTGGACGCAGAAAAAGGAGCGCACACCGGGCGATGCCAATCTGCTATTGTTTGGTAGCTTGGCAGGC
CGCTGTCAGGTCCTACCAACACCACTATACGTTGCCAGCAAGCATGGTATACATGGATTTGCAAGGTCACTTGGT
CCCTTGCGTGATAGCATTGGAATTCGCGTCGGCTGCATAGCCCCAGGCCCAGTCAGAACCGAACTCTTCAAGGGT
TACGAAGTGATGCTTAAGGATGCCGAAACGATTCCTACCCGCCAAGTGGCAGACGCCATGATGCAGCTAGTAGTC
AATGACGCGTACGGCGACGGCACCATCCTTGAGATATATCCAGGCAAGACATATGTCGTTCCGGTATTCAATGCG
GCTCCCATAGGTGAGGAGGAATTTACATTTCCCGGCCTGGGAGTCTGGAACGACCAGATCCTCGGCAATCTTGGC
ACCAACGGTCTTCAGGTGTGA
Gene >OphauG2|742
ATGGCCGACCTCAGGCTCAATCCCGAGGCCATTGAACTACTCAATACCTACGCACCGCGAGGTACCGAGGATGCC
AACAGCCGCAAGGATATCAACGGCCATGGACGCCCTACGGCGCATTTCCACAAGACTGATGTGACATCATGGCCG
CAGCTTTTGGCTCTATGGGAGGCAACGCTGGCCGCATTTCCCTCCATAAACATTGTCGTTCCTGGCGCAGGAATA
TACGAACTAGGCAAGAACAGCTTTTGGGACGCCCCCAAATCAAAGACAAACCCAAATAGCAATTCGCAAGATGCC
GCAGACAGTGAGCCAGGCAATTACAATCTTATCAACATCAATCTCGTCGCTCCCATCCGGTTGAGCCAGCTGGCC
ATTGGATACTGGACGCAGAAAAAGGAGCGCACACCGGGCGATGCCAATCTGCTATTGTTTGGTAGCTTGGCAGGC
CGCTGTCAGGTCCTACCAACACCACTATACGTTGCCAGCAAGCATGGTATACATGGATTTGCAAGGTCACTTGGT
CCCTTGCGTGATAGCATTGGAATTCGCGTCGGCTGCATAGCCCCAGGCCCAGTCAGAGTAAGATGATGACTTGGA
TACCAAGGAGCAATGTGATGGGCGCTGATGTTTCGACTTGTGACCAGACCGAACTCTTCAAGGGTTACGAAGTGA
TGCTTAAGGATGCCGAAACGATTCCTACCCGCCAAGTGGCAGACGCCATGATGCAGCTAGTAGTCAATGACGCGT
ACGGCGACGGCACCATCCTTGAGATATATCCAGGCAAGACATATGTCGTTCCGGTATTCAATGCGGCTCCCATAG
GTGAGGAGGAATTTACATTTCCCGGCCTGGGAGTCTGGAACGACCAGATCCTCGGCAATCTTGGCACCAACGGTC
TTCAGGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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