© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|7401 |
| Gene name | |
| Location | Contig_858:5390..5891 |
| Strand | + |
| Gene length (bp) | 501 |
| Transcript length (bp) | 501 |
| Coding sequence length (bp) | 501 |
| Protein length (aa) | 167 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12430 | ABA_GPCR | Abscisic acid G-protein coupled receptor | 1.3E-29 | 12 | 149 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B2ZXD5|GPHR_CRIGR | Golgi pH regulator OS=Cricetulus griseus GN=GPR89 PE=2 SV=1 | 1 | 152 | 7.0E-14 |
| sp|Q8BS95|GPHR_MOUSE | Golgi pH regulator OS=Mus musculus GN=Gpr89a PE=1 SV=2 | 1 | 152 | 7.0E-14 |
| sp|B5X1G3|GPHR_SALSA | Golgi pH regulator OS=Salmo salar GN=gpr89 PE=2 SV=1 | 1 | 152 | 2.0E-13 |
| sp|Q5F448|GPHR_CHICK | Golgi pH regulator OS=Gallus gallus GN=GPR89 PE=2 SV=1 | 1 | 152 | 3.0E-13 |
| sp|Q5BIM9|GPHR_BOVIN | Golgi pH regulator OS=Bos taurus GN=GPR89A PE=2 SV=2 | 1 | 152 | 4.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B2ZXD5|GPHR_CRIGR | Golgi pH regulator OS=Cricetulus griseus GN=GPR89 PE=2 SV=1 | 1 | 152 | 7.0E-14 |
| sp|Q8BS95|GPHR_MOUSE | Golgi pH regulator OS=Mus musculus GN=Gpr89a PE=1 SV=2 | 1 | 152 | 7.0E-14 |
| sp|B5X1G3|GPHR_SALSA | Golgi pH regulator OS=Salmo salar GN=gpr89 PE=2 SV=1 | 1 | 152 | 2.0E-13 |
| sp|Q5F448|GPHR_CHICK | Golgi pH regulator OS=Gallus gallus GN=GPR89 PE=2 SV=1 | 1 | 152 | 3.0E-13 |
| sp|Q5BIM9|GPHR_BOVIN | Golgi pH regulator OS=Bos taurus GN=GPR89A PE=2 SV=2 | 1 | 152 | 4.0E-13 |
| sp|Q6DDW6|GPHR_XENLA | Golgi pH regulator OS=Xenopus laevis GN=gpr89-b PE=2 SV=1 | 1 | 152 | 4.0E-13 |
| sp|P0CG08|GPHRB_HUMAN | Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=1 SV=1 | 1 | 152 | 5.0E-13 |
| sp|B7ZAQ6|GPHRA_HUMAN | Golgi pH regulator A OS=Homo sapiens GN=GPR89A PE=1 SV=2 | 1 | 152 | 5.0E-13 |
| sp|Q54QM5|GPHR_DICDI | Golgi pH regulator homolog OS=Dictyostelium discoideum GN=gpr89 PE=3 SV=1 | 2 | 154 | 3.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 42 | 64 | 22 |
| 2 | 84 | 106 | 22 |
| 3 | 127 | 146 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7401 MSALRRLCGAPSASDPISRALGLVVWLWDPSIDQDAWSRLASFALVGCVLVASVSTAAQTIRLLSPSPSSSSSSS SPFSSAPALLALAQLAATYLLAASMLLRSLLPPPLASRTPILAALDTRFVDLWFDSCFLAGAASTFFVLWLGRRH DPWHAYHVEEMGLKRC* |
| Coding | >OphauG2|7401 ATGTCGGCCCTCCGTCGCCTCTGCGGCGCTCCCAGCGCCTCGGATCCCATCAGCCGTGCCCTCGGCCTCGTCGTC TGGCTCTGGGATCCCTCCATTGACCAAGACGCCTGGTCCCGCCTTGCCAGCTTTGCCCTCGTCGGCTGCGTCCTC GTCGCCAGTGTCAGCACCGCCGCCCAAACCATCCGTCTCCTCTCCCCCTCTCCCTCCTCTTCCTCCTCTTCCTCC TCCCCATTCTCCTCTGCCCCCGCTCTCCTCGCCCTCGCCCAACTCGCGGCCACGTATCTCCTCGCTGCAAGCATG CTCTTGCGCTCCCTCTTACCTCCCCCTCTCGCCTCCCGCACCCCTATTCTCGCCGCCCTCGACACCCGCTTTGTC GATCTATGGTTTGACTCGTGCTTCCTCGCTGGCGCTGCCTCCACCTTTTTCGTCTTGTGGCTTGGCAGACGCCAC GATCCTTGGCATGCCTACCATGTCGAGGAAATGGGCCTCAAGCGATGCTAG |
| Transcript | >OphauG2|7401 ATGTCGGCCCTCCGTCGCCTCTGCGGCGCTCCCAGCGCCTCGGATCCCATCAGCCGTGCCCTCGGCCTCGTCGTC TGGCTCTGGGATCCCTCCATTGACCAAGACGCCTGGTCCCGCCTTGCCAGCTTTGCCCTCGTCGGCTGCGTCCTC GTCGCCAGTGTCAGCACCGCCGCCCAAACCATCCGTCTCCTCTCCCCCTCTCCCTCCTCTTCCTCCTCTTCCTCC TCCCCATTCTCCTCTGCCCCCGCTCTCCTCGCCCTCGCCCAACTCGCGGCCACGTATCTCCTCGCTGCAAGCATG CTCTTGCGCTCCCTCTTACCTCCCCCTCTCGCCTCCCGCACCCCTATTCTCGCCGCCCTCGACACCCGCTTTGTC GATCTATGGTTTGACTCGTGCTTCCTCGCTGGCGCTGCCTCCACCTTTTTCGTCTTGTGGCTTGGCAGACGCCAC GATCCTTGGCATGCCTACCATGTCGAGGAAATGGGCCTCAAGCGATGCTAG |
| Gene | >OphauG2|7401 ATGTCGGCCCTCCGTCGCCTCTGCGGCGCTCCCAGCGCCTCGGATCCCATCAGCCGTGCCCTCGGCCTCGTCGTC TGGCTCTGGGATCCCTCCATTGACCAAGACGCCTGGTCCCGCCTTGCCAGCTTTGCCCTCGTCGGCTGCGTCCTC GTCGCCAGTGTCAGCACCGCCGCCCAAACCATCCGTCTCCTCTCCCCCTCTCCCTCCTCTTCCTCCTCTTCCTCC TCCCCATTCTCCTCTGCCCCCGCTCTCCTCGCCCTCGCCCAACTCGCGGCCACGTATCTCCTCGCTGCAAGCATG CTCTTGCGCTCCCTCTTACCTCCCCCTCTCGCCTCCCGCACCCCTATTCTCGCCGCCCTCGACACCCGCTTTGTC GATCTATGGTTTGACTCGTGCTTCCTCGCTGGCGCTGCCTCCACCTTTTTCGTCTTGTGGCTTGGCAGACGCCAC GATCCTTGGCATGCCTACCATGTCGAGGAAATGGGCCTCAAGCGATGCTAG |