Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7356
Gene name
LocationContig_847:2791..3691
Strand-
Gene length (bp)900
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12138 Spherulin4 Spherulation-specific family 4 1.9E-59 6 294

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P11113|SR4_PHYPO Spherulin-4 OS=Physarum polycephalum PE=2 SV=1 6 204 1.0E-15

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7356
MAAPFILVPLYMYPLEQAWEPLFQAARAHRELRFVAVVNPASGPGADALPDQSYIAALRRLADEPNIEAVGYVYC
SYGARHPAAACADMDAYCGWRINGRPVIGGVFFDEAPAANDKVDYMHHLAQHANKTWRALHHLDHAAAQHPDHHS
DSDDSPAGDTTVQDTSPPHALVILNPGVAVPLAYFAHCDHIVVFEGSEAEWQRRCIKEPGLHSILSDHHALSKAV
AIVHSIQPSHRRLDRFISFLQNSPKKQADLDSTLTQIRALGLVGLYLTDQLDGGYTRWPAAWMQLADAVAQWLP*
Coding >OphauG2|7356
ATGGCGGCCCCCTTCATCCTTGTGCCGCTCTACATGTACCCGCTTGAGCAGGCATGGGAGCCACTGTTCCAGGCG
GCTCGCGCCCACCGTGAGCTGCGCTTCGTGGCCGTGGTGAATCCGGCCAGCGGTCCCGGGGCTGACGCGCTGCCG
GACCAGAGCTACATTGCGGCTCTACGGCGCTTGGCCGACGAGCCCAACATTGAGGCGGTTGGCTATGTCTACTGC
AGCTATGGCGCTCGCCACCCTGCCGCCGCCTGTGCCGACATGGACGCCTACTGCGGCTGGCGCATCAACGGGCGG
CCCGTCATTGGGGGCGTCTTTTTTGACGAGGCGCCTGCTGCCAACGACAAGGTCGACTACATGCACCACTTGGCC
CAGCACGCAAACAAGACGTGGCGTGCCCTCCACCACCTCGACCATGCCGCCGCCCAGCACCCCGACCACCACAGC
GACAGCGACGACTCGCCTGCGGGGGACACGACTGTCCAAGACACCTCCCCGCCACACGCCCTCGTCATCCTGAAC
CCTGGCGTTGCCGTCCCTCTGGCCTACTTTGCCCACTGTGACCACATTGTCGTCTTTGAGGGCTCCGAGGCCGAG
TGGCAGCGCCGCTGCATCAAGGAGCCTGGCCTCCACTCCATCCTCTCGGACCACCACGCTCTGTCCAAGGCCGTG
GCCATTGTCCACTCCATCCAGCCCTCCCACCGCCGCCTGGATCGCTTCATTTCCTTTCTCCAAAACTCTCCCAAG
AAGCAGGCCGACTTGGACTCCACCCTCACCCAGATACGCGCTCTCGGCCTCGTCGGCCTCTACCTGACTGACCAG
CTCGACGGTGGCTATACGAGATGGCCTGCAGCTTGGATGCAGCTTGCCGATGCCGTCGCGCAATGGCTTCCCTGA
Transcript >OphauG2|7356
ATGGCGGCCCCCTTCATCCTTGTGCCGCTCTACATGTACCCGCTTGAGCAGGCATGGGAGCCACTGTTCCAGGCG
GCTCGCGCCCACCGTGAGCTGCGCTTCGTGGCCGTGGTGAATCCGGCCAGCGGTCCCGGGGCTGACGCGCTGCCG
GACCAGAGCTACATTGCGGCTCTACGGCGCTTGGCCGACGAGCCCAACATTGAGGCGGTTGGCTATGTCTACTGC
AGCTATGGCGCTCGCCACCCTGCCGCCGCCTGTGCCGACATGGACGCCTACTGCGGCTGGCGCATCAACGGGCGG
CCCGTCATTGGGGGCGTCTTTTTTGACGAGGCGCCTGCTGCCAACGACAAGGTCGACTACATGCACCACTTGGCC
CAGCACGCAAACAAGACGTGGCGTGCCCTCCACCACCTCGACCATGCCGCCGCCCAGCACCCCGACCACCACAGC
GACAGCGACGACTCGCCTGCGGGGGACACGACTGTCCAAGACACCTCCCCGCCACACGCCCTCGTCATCCTGAAC
CCTGGCGTTGCCGTCCCTCTGGCCTACTTTGCCCACTGTGACCACATTGTCGTCTTTGAGGGCTCCGAGGCCGAG
TGGCAGCGCCGCTGCATCAAGGAGCCTGGCCTCCACTCCATCCTCTCGGACCACCACGCTCTGTCCAAGGCCGTG
GCCATTGTCCACTCCATCCAGCCCTCCCACCGCCGCCTGGATCGCTTCATTTCCTTTCTCCAAAACTCTCCCAAG
AAGCAGGCCGACTTGGACTCCACCCTCACCCAGATACGCGCTCTCGGCCTCGTCGGCCTCTACCTGACTGACCAG
CTCGACGGTGGCTATACGAGATGGCCTGCAGCTTGGATGCAGCTTGCCGATGCCGTCGCGCAATGGCTTCCCTGA
Gene >OphauG2|7356
ATGGCGGCCCCCTTCATCCTTGTGCCGCTCTACATGTACCCGCTTGAGCAGGCATGGGAGCCACTGTTCCAGGCG
GCTCGCGCCCACCGTGAGCTGCGCTTCGTGGCCGTGGTGAATCCGGCCAGCGGTCCCGGGGCTGACGCGCTGCCG
GACCAGAGCTACATTGCGGCTCTACGGCGCTTGGCCGACGAGCCCAACATTGAGGCGGTTGGCTATGTCTACTGC
AGCTATGGCGCTCGCCACCCTGCCGCCGCCTGTGCCGACATGGACGCCTACTGCGGCTGGCGCATCAACGGGCGG
CCCGTCATTGGGGGCGTCTTTTTTGACGAGGCGCCTGCTGCCAACGACAAGGTCGACTACATGCACCACTTGGCC
CAGCACGCAAACAAGACGTGGCGTGCCCTCCACCACCTCGACCATGCCGCCGCCCAGCACCCCGACCACCACAGC
GACAGCGACGACTCGCCTGCGGGGGACACGACTGTCCAAGACACCTCCCCGCCACACGCCCTCGTCATCCTGAAC
CCTGGCGTTGCCGTCCCTCTGGCCTACTTTGCCCACTGTGACCACATTGTCGTCTTTGAGGGCTCCGAGGCCGAG
TGGCAGCGCCGCTGCATCAAGGAGCCTGGCCTCCACTCCATCCTCTCGGACCACCACGCTCTGTCCAAGGCCGTG
GCCATTGTCCACTCCATCCAGCCCTCCCACCGCCGCCTGGATCGCTTCATTTCCTTTCTCCAAAACTCTCCCAAG
AAGCAGGCCGACTTGGACTCCACCCTCACCCAGATACGCGCTCTCGGCCTCGTCGGCCTCTACCTGACTGACCAG
CTCGACGGTGGCTATACGAGATGGCCTGCAGCTTGGATGCAGCTTGCCGATGCCGTCGCGCAATGGCTTCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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