Protein ID | OphauG2|7199 |
Gene name | |
Location | Contig_81:25944..27935 |
Strand | - |
Gene length (bp) | 1991 |
Transcript length (bp) | 1881 |
Coding sequence length (bp) | 1881 |
Protein length (aa) | 627 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02225 | PA | PA domain | 5.7E-09 | 196 | 279 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q6GQB9|EDEM3_XENLA | ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis GN=edem3 PE=2 SV=2 | 196 | 272 | 8.0E-07 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 28 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
2 | 560 | 582 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|7199 MRPPRIAILAIAIAAFIFLLCRPFISAGSSSNAASSYPAEARPTSKSVFGFVYDNTPFWLFPPNAAISLTDDNST SFAARPAAFGPKLAPKGLSGQLWVGSGFAEDSLDGNGELGCSDIPGWGSGNTRAALKNSFRIGMPRISAAQIKSG LPKRGGSQHETPPLAPSSSSSNDTKTDSNTLGHTPHSFIGRRDSSASSSSHADIQSMQEGAEIQGKVVLLMRGGC GFLEKVMWAQRRGAVAVIVGDNQKGGPLIQMFAHGDEVENVTVPSVFTARTTAHLLSSLTQPGSFIEDSLDNNGK PVLKVQQGTRARQEKRKRAPIVPRPMSTSRSLSTASNVKQTAKSRHKATTEPPNTTPLAKRGWLARALGWGHSSR TVDTQSRPPSSGRLDWVLVDDWSDEKDKVMKEGLARPKDSKPVDDTFVIGVHDWRDPDFLNKPAVAKTSDKTINQ RKPQEPKSTQEAQGLKGGSITPSSGEYNPNRAIIKDGKEAGSAGSKTESKGVGLIAKLFGDGADADEPIEVLDND SAEVDALSHHESSQHEGLWVTITPGSSASSFFDTLLILVISPFLTLTVVYALLIITVTFKRVSHDSIVATVADKA TTALENYYWDSAERKFSVPESSVTNA* |
Coding | >OphauG2|7199 ATGCGGCCACCGCGCATCGCCATTCTTGCCATCGCCATCGCAGCCTTTATATTTCTCCTTTGCCGTCCCTTCATA TCTGCCGGCTCCTCGTCCAATGCCGCGTCGTCGTACCCGGCTGAGGCCCGACCCACGTCCAAATCCGTCTTTGGT TTCGTCTACGACAATACTCCATTTTGGCTATTCCCCCCAAACGCTGCCATCAGCTTGACAGACGACAACAGCACG TCTTTTGCTGCGCGCCCGGCTGCCTTTGGTCCCAAGCTCGCCCCCAAGGGTCTCAGTGGCCAGCTTTGGGTTGGT AGTGGTTTTGCTGAGGACAGTCTGGATGGCAATGGGGAGCTCGGCTGCAGTGACATACCCGGCTGGGGCAGCGGA AACACCAGGGCTGCCCTGAAAAACTCGTTTCGTATTGGCATGCCCAGGATATCGGCCGCCCAGATCAAATCTGGT CTGCCTAAACGTGGCGGAAGCCAGCACGAAACGCCCCCCCTGGCCCCATCGTCCAGCTCCAGCAATGATACCAAG ACGGACAGTAATACCCTAGGCCACACCCCTCATAGCTTCATTGGACGTCGGGATTCGTCGGCTTCTTCTTCGTCT CACGCCGATATACAGTCCATGCAAGAAGGCGCCGAGATACAGGGCAAGGTGGTGCTCCTGATGCGTGGCGGCTGT GGCTTTCTGGAAAAGGTCATGTGGGCTCAGCGACGGGGCGCCGTCGCTGTCATTGTTGGCGACAATCAAAAGGGC GGCCCCCTTATACAAATGTTTGCCCACGGCGACGAAGTTGAAAACGTGACGGTGCCGTCTGTATTCACCGCCCGG ACCACTGCCCATCTACTTTCTTCTCTGACGCAACCTGGGAGCTTCATTGAGGATTCCCTCGATAATAACGGCAAA CCTGTACTCAAGGTTCAACAGGGCACTCGGGCTCGGCAAGAGAAGCGGAAGCGAGCCCCCATTGTGCCTAGACCC ATGTCTACATCTAGAAGCCTCTCTACAGCCTCCAATGTCAAGCAGACGGCCAAGAGCAGGCACAAGGCGACAACA GAACCTCCCAACACAACACCTCTAGCCAAGCGCGGCTGGCTTGCTCGAGCCCTTGGCTGGGGCCATTCTTCCCGC ACTGTTGACACGCAGAGCCGGCCACCAAGCAGCGGCCGCCTCGACTGGGTTCTTGTCGACGACTGGAGCGATGAA AAAGACAAGGTGATGAAAGAAGGCCTGGCAAGACCCAAGGACTCCAAGCCAGTAGATGACACATTTGTCATTGGC GTTCATGACTGGCGAGATCCCGATTTCTTAAACAAGCCTGCCGTGGCCAAGACATCTGACAAGACTATCAACCAA AGAAAACCCCAAGAACCAAAGAGCACTCAAGAGGCTCAAGGCCTCAAGGGCGGCAGCATTACTCCCAGCAGCGGC GAGTACAATCCAAACAGGGCCATTATTAAAGATGGAAAGGAAGCTGGCAGTGCTGGCTCTAAGACTGAGAGCAAG GGAGTTGGCCTCATCGCGAAACTGTTTGGCGATGGCGCCGATGCAGATGAGCCGATTGAGGTTCTTGACAACGAC TCGGCCGAAGTGGATGCTTTGAGTCACCACGAGTCTTCTCAGCACGAGGGCCTATGGGTTACAATTACGCCGGGC AGCAGTGCTAGCTCCTTTTTTGACACGTTGCTCATCCTTGTCATTAGCCCTTTTCTGACCTTGACCGTTGTATAC GCGCTACTTATTATTACCGTCACCTTCAAGCGTGTCTCCCATGACTCCATTGTTGCAACAGTCGCCGACAAGGCC ACGACCGCGCTCGAGAACTACTACTGGGATTCCGCAGAGCGAAAATTTTCTGTCCCCGAATCCAGCGTCACCAAC GCCTGA |
Transcript | >OphauG2|7199 ATGCGGCCACCGCGCATCGCCATTCTTGCCATCGCCATCGCAGCCTTTATATTTCTCCTTTGCCGTCCCTTCATA TCTGCCGGCTCCTCGTCCAATGCCGCGTCGTCGTACCCGGCTGAGGCCCGACCCACGTCCAAATCCGTCTTTGGT TTCGTCTACGACAATACTCCATTTTGGCTATTCCCCCCAAACGCTGCCATCAGCTTGACAGACGACAACAGCACG TCTTTTGCTGCGCGCCCGGCTGCCTTTGGTCCCAAGCTCGCCCCCAAGGGTCTCAGTGGCCAGCTTTGGGTTGGT AGTGGTTTTGCTGAGGACAGTCTGGATGGCAATGGGGAGCTCGGCTGCAGTGACATACCCGGCTGGGGCAGCGGA AACACCAGGGCTGCCCTGAAAAACTCGTTTCGTATTGGCATGCCCAGGATATCGGCCGCCCAGATCAAATCTGGT CTGCCTAAACGTGGCGGAAGCCAGCACGAAACGCCCCCCCTGGCCCCATCGTCCAGCTCCAGCAATGATACCAAG ACGGACAGTAATACCCTAGGCCACACCCCTCATAGCTTCATTGGACGTCGGGATTCGTCGGCTTCTTCTTCGTCT CACGCCGATATACAGTCCATGCAAGAAGGCGCCGAGATACAGGGCAAGGTGGTGCTCCTGATGCGTGGCGGCTGT GGCTTTCTGGAAAAGGTCATGTGGGCTCAGCGACGGGGCGCCGTCGCTGTCATTGTTGGCGACAATCAAAAGGGC GGCCCCCTTATACAAATGTTTGCCCACGGCGACGAAGTTGAAAACGTGACGGTGCCGTCTGTATTCACCGCCCGG ACCACTGCCCATCTACTTTCTTCTCTGACGCAACCTGGGAGCTTCATTGAGGATTCCCTCGATAATAACGGCAAA CCTGTACTCAAGGTTCAACAGGGCACTCGGGCTCGGCAAGAGAAGCGGAAGCGAGCCCCCATTGTGCCTAGACCC ATGTCTACATCTAGAAGCCTCTCTACAGCCTCCAATGTCAAGCAGACGGCCAAGAGCAGGCACAAGGCGACAACA GAACCTCCCAACACAACACCTCTAGCCAAGCGCGGCTGGCTTGCTCGAGCCCTTGGCTGGGGCCATTCTTCCCGC ACTGTTGACACGCAGAGCCGGCCACCAAGCAGCGGCCGCCTCGACTGGGTTCTTGTCGACGACTGGAGCGATGAA AAAGACAAGGTGATGAAAGAAGGCCTGGCAAGACCCAAGGACTCCAAGCCAGTAGATGACACATTTGTCATTGGC GTTCATGACTGGCGAGATCCCGATTTCTTAAACAAGCCTGCCGTGGCCAAGACATCTGACAAGACTATCAACCAA AGAAAACCCCAAGAACCAAAGAGCACTCAAGAGGCTCAAGGCCTCAAGGGCGGCAGCATTACTCCCAGCAGCGGC GAGTACAATCCAAACAGGGCCATTATTAAAGATGGAAAGGAAGCTGGCAGTGCTGGCTCTAAGACTGAGAGCAAG GGAGTTGGCCTCATCGCGAAACTGTTTGGCGATGGCGCCGATGCAGATGAGCCGATTGAGGTTCTTGACAACGAC TCGGCCGAAGTGGATGCTTTGAGTCACCACGAGTCTTCTCAGCACGAGGGCCTATGGGTTACAATTACGCCGGGC AGCAGTGCTAGCTCCTTTTTTGACACGTTGCTCATCCTTGTCATTAGCCCTTTTCTGACCTTGACCGTTGTATAC GCGCTACTTATTATTACCGTCACCTTCAAGCGTGTCTCCCATGACTCCATTGTTGCAACAGTCGCCGACAAGGCC ACGACCGCGCTCGAGAACTACTACTGGGATTCCGCAGAGCGAAAATTTTCTGTCCCCGAATCCAGCGTCACCAAC GCCTGA |
Gene | >OphauG2|7199 ATGCGGCCACCGCGCATCGCCATTCTTGCCATCGCCATCGCAGCCTTTATATTTCTCCTTTGCCGTCCCTTCATA TCTGCCGGCTCCTCGTCCAATGCCGCGTCGTCGTACCCGGCTGAGGCCCGACCCACGTCCAAATCCGTCTTTGGT TTCGTCTACGACAATACTCCATTTTGGCTATTCCCCCCAAACGCTGCCATCAGCTTGACAGACGACAACAGCACG TCTTTTGCTGCGCGCCCGGCTGCCTTTGGTCCCAAGCTCGCCCCCAAGGGTCTCAGTGGCCAGCTTTGGGTTGGT AGTGGTTTTGCTGAGGACAGTCTGGATGGCAATGGGGAGCTCGGCTGCAGTGACATACCCGGCTGGGGCAGCGGA AACACCAGGGCTGCCCTGAAAAACTCGTTTCGTATTGGCATGCCCAGGATATCGGCCGCCCAGATCAAATCTGGT CTGCCTAAACGTGGCGGAAGCCAGCACGAAACGCCCCCCCTGGCCCCATCGTCCAGCTCCAGCAATGATACCAAG ACGGACAGTAATACCCTAGGCCACACCCCTCATAGCTTCATTGGACGTCGGGATTCGTCGGCTTCTTCTTCGTCT CACGCCGATATACAGTCCATGCAAGAAGGCGCCGAGATACAGGGCAAGGTGGTGCTCCTGATGCGTGGCGGCTGT GGCTTTCTGGAAAAGGTCATGTGGGCTCAGCGACGGGGCGCCGTCGCTGTCATTGTTGGCGACAATCAAAAGGGC GGCCCCCTTATACAAATGTTTGCCCACGGCGACGAAGTTGAAAACGTGACGGTGCCGTCTGTATTCACCGCCCGG ACCACTGCCCATCTACTTTCTTCTCTGACGCAACCTGGGAGCTTCATTGAGGATTCCCTCGATAATAACGGCAAA CCTGTACTCAAGGTTCAACAGGGCACTCGGGCTCGGCAAGAGAAGCGGAAGCGAGCCCCCATTGTGCCTAGACCC ATGTCTACATCTAGAAGCCTCTCTACAGCCTCCAATGTCAAGCAGACGGCCAAGAGCAGGCACAAGGCGACAACA GAACCTCCCAACACAACACCTCTAGCCAAGCGCGGCTGGCTTGCTCGAGCCCTTGGCTGGGGCCATTCTTCCCGC ACTGTTGACACGCAGAGCCGGCCACCAAGCAGCGGCCGCCTCGACTGGGTTCTTGTCGACGACTGGAGCGATGAA AAAGACAAGGTGATGAAAGAAGGCCTGGCAAGACCCAAGGACTCCAAGCCAGTAGATGACACATTTGTCATTGGC GTTCATGACTGGCGAGATCCCGATTTCTTAAACAAGCCTGCCGTGGCCAAGACATCTGACAAGACTATCAACCAA AGAAAACCCCAAGAACCAAAGAGCACTCAAGAGGCTCAAGGCCTCAAGGGCGGCAGCATTACTCCCAGCAGCGGC GAGTACAATCCAAACAGGGCCATTATTAAAGATGGAAAGGAAGCTGGCAGTGCTGGCTCTAAGACTGAGAGCAAG GGAGTTGGCCTCATCGCGAAACTGTTTGGCGATGGCGCCGATGCAGATGAGCCGATTGAGGTTCTTGACAACGAC TCGGCCGAAGTGGATGCTTTGAGTCACCACGAGTCTTCTCAGCACGAGGGCCTATGGGTTACAATTACGCCGGGC AGCAGTGCTAGCTCCTTTTTTGACACGTTGCTCATCCTTGTCATTAGCCCTTTTCTGACCTTGACCGTTGTATAC GCGCTACTTATTGTTCGTTCGAGCGTTCGAAGGCGACGATGGAGGGCTCCAAAGTCTGTTGTTGAACGATTGCCT GTACGGACCTATCACACCGTTGCCGGGTCACCCAGCCTGTCTCCCAGATTACCGTCACCTTCAAGCGTGTCTCCC ATGACTCCATTGTTGCAACAGTCGCCGACAAGGCCACGACCGCGCTCGAGAACTACTACTGGGATTCCGCAGAGC GAAAATTTTCTGTCCCCGAATCCAGCGTCACCAACGCCTGA |