Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7199
Gene name
LocationContig_81:25944..27935
Strand-
Gene length (bp)1991
Transcript length (bp)1881
Coding sequence length (bp)1881
Protein length (aa) 627

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02225 PA PA domain 5.7E-09 196 279

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q6GQB9|EDEM3_XENLA ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis GN=edem3 PE=2 SV=2 196 272 8.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 560 582 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7199
MRPPRIAILAIAIAAFIFLLCRPFISAGSSSNAASSYPAEARPTSKSVFGFVYDNTPFWLFPPNAAISLTDDNST
SFAARPAAFGPKLAPKGLSGQLWVGSGFAEDSLDGNGELGCSDIPGWGSGNTRAALKNSFRIGMPRISAAQIKSG
LPKRGGSQHETPPLAPSSSSSNDTKTDSNTLGHTPHSFIGRRDSSASSSSHADIQSMQEGAEIQGKVVLLMRGGC
GFLEKVMWAQRRGAVAVIVGDNQKGGPLIQMFAHGDEVENVTVPSVFTARTTAHLLSSLTQPGSFIEDSLDNNGK
PVLKVQQGTRARQEKRKRAPIVPRPMSTSRSLSTASNVKQTAKSRHKATTEPPNTTPLAKRGWLARALGWGHSSR
TVDTQSRPPSSGRLDWVLVDDWSDEKDKVMKEGLARPKDSKPVDDTFVIGVHDWRDPDFLNKPAVAKTSDKTINQ
RKPQEPKSTQEAQGLKGGSITPSSGEYNPNRAIIKDGKEAGSAGSKTESKGVGLIAKLFGDGADADEPIEVLDND
SAEVDALSHHESSQHEGLWVTITPGSSASSFFDTLLILVISPFLTLTVVYALLIITVTFKRVSHDSIVATVADKA
TTALENYYWDSAERKFSVPESSVTNA*
Coding >OphauG2|7199
ATGCGGCCACCGCGCATCGCCATTCTTGCCATCGCCATCGCAGCCTTTATATTTCTCCTTTGCCGTCCCTTCATA
TCTGCCGGCTCCTCGTCCAATGCCGCGTCGTCGTACCCGGCTGAGGCCCGACCCACGTCCAAATCCGTCTTTGGT
TTCGTCTACGACAATACTCCATTTTGGCTATTCCCCCCAAACGCTGCCATCAGCTTGACAGACGACAACAGCACG
TCTTTTGCTGCGCGCCCGGCTGCCTTTGGTCCCAAGCTCGCCCCCAAGGGTCTCAGTGGCCAGCTTTGGGTTGGT
AGTGGTTTTGCTGAGGACAGTCTGGATGGCAATGGGGAGCTCGGCTGCAGTGACATACCCGGCTGGGGCAGCGGA
AACACCAGGGCTGCCCTGAAAAACTCGTTTCGTATTGGCATGCCCAGGATATCGGCCGCCCAGATCAAATCTGGT
CTGCCTAAACGTGGCGGAAGCCAGCACGAAACGCCCCCCCTGGCCCCATCGTCCAGCTCCAGCAATGATACCAAG
ACGGACAGTAATACCCTAGGCCACACCCCTCATAGCTTCATTGGACGTCGGGATTCGTCGGCTTCTTCTTCGTCT
CACGCCGATATACAGTCCATGCAAGAAGGCGCCGAGATACAGGGCAAGGTGGTGCTCCTGATGCGTGGCGGCTGT
GGCTTTCTGGAAAAGGTCATGTGGGCTCAGCGACGGGGCGCCGTCGCTGTCATTGTTGGCGACAATCAAAAGGGC
GGCCCCCTTATACAAATGTTTGCCCACGGCGACGAAGTTGAAAACGTGACGGTGCCGTCTGTATTCACCGCCCGG
ACCACTGCCCATCTACTTTCTTCTCTGACGCAACCTGGGAGCTTCATTGAGGATTCCCTCGATAATAACGGCAAA
CCTGTACTCAAGGTTCAACAGGGCACTCGGGCTCGGCAAGAGAAGCGGAAGCGAGCCCCCATTGTGCCTAGACCC
ATGTCTACATCTAGAAGCCTCTCTACAGCCTCCAATGTCAAGCAGACGGCCAAGAGCAGGCACAAGGCGACAACA
GAACCTCCCAACACAACACCTCTAGCCAAGCGCGGCTGGCTTGCTCGAGCCCTTGGCTGGGGCCATTCTTCCCGC
ACTGTTGACACGCAGAGCCGGCCACCAAGCAGCGGCCGCCTCGACTGGGTTCTTGTCGACGACTGGAGCGATGAA
AAAGACAAGGTGATGAAAGAAGGCCTGGCAAGACCCAAGGACTCCAAGCCAGTAGATGACACATTTGTCATTGGC
GTTCATGACTGGCGAGATCCCGATTTCTTAAACAAGCCTGCCGTGGCCAAGACATCTGACAAGACTATCAACCAA
AGAAAACCCCAAGAACCAAAGAGCACTCAAGAGGCTCAAGGCCTCAAGGGCGGCAGCATTACTCCCAGCAGCGGC
GAGTACAATCCAAACAGGGCCATTATTAAAGATGGAAAGGAAGCTGGCAGTGCTGGCTCTAAGACTGAGAGCAAG
GGAGTTGGCCTCATCGCGAAACTGTTTGGCGATGGCGCCGATGCAGATGAGCCGATTGAGGTTCTTGACAACGAC
TCGGCCGAAGTGGATGCTTTGAGTCACCACGAGTCTTCTCAGCACGAGGGCCTATGGGTTACAATTACGCCGGGC
AGCAGTGCTAGCTCCTTTTTTGACACGTTGCTCATCCTTGTCATTAGCCCTTTTCTGACCTTGACCGTTGTATAC
GCGCTACTTATTATTACCGTCACCTTCAAGCGTGTCTCCCATGACTCCATTGTTGCAACAGTCGCCGACAAGGCC
ACGACCGCGCTCGAGAACTACTACTGGGATTCCGCAGAGCGAAAATTTTCTGTCCCCGAATCCAGCGTCACCAAC
GCCTGA
Transcript >OphauG2|7199
ATGCGGCCACCGCGCATCGCCATTCTTGCCATCGCCATCGCAGCCTTTATATTTCTCCTTTGCCGTCCCTTCATA
TCTGCCGGCTCCTCGTCCAATGCCGCGTCGTCGTACCCGGCTGAGGCCCGACCCACGTCCAAATCCGTCTTTGGT
TTCGTCTACGACAATACTCCATTTTGGCTATTCCCCCCAAACGCTGCCATCAGCTTGACAGACGACAACAGCACG
TCTTTTGCTGCGCGCCCGGCTGCCTTTGGTCCCAAGCTCGCCCCCAAGGGTCTCAGTGGCCAGCTTTGGGTTGGT
AGTGGTTTTGCTGAGGACAGTCTGGATGGCAATGGGGAGCTCGGCTGCAGTGACATACCCGGCTGGGGCAGCGGA
AACACCAGGGCTGCCCTGAAAAACTCGTTTCGTATTGGCATGCCCAGGATATCGGCCGCCCAGATCAAATCTGGT
CTGCCTAAACGTGGCGGAAGCCAGCACGAAACGCCCCCCCTGGCCCCATCGTCCAGCTCCAGCAATGATACCAAG
ACGGACAGTAATACCCTAGGCCACACCCCTCATAGCTTCATTGGACGTCGGGATTCGTCGGCTTCTTCTTCGTCT
CACGCCGATATACAGTCCATGCAAGAAGGCGCCGAGATACAGGGCAAGGTGGTGCTCCTGATGCGTGGCGGCTGT
GGCTTTCTGGAAAAGGTCATGTGGGCTCAGCGACGGGGCGCCGTCGCTGTCATTGTTGGCGACAATCAAAAGGGC
GGCCCCCTTATACAAATGTTTGCCCACGGCGACGAAGTTGAAAACGTGACGGTGCCGTCTGTATTCACCGCCCGG
ACCACTGCCCATCTACTTTCTTCTCTGACGCAACCTGGGAGCTTCATTGAGGATTCCCTCGATAATAACGGCAAA
CCTGTACTCAAGGTTCAACAGGGCACTCGGGCTCGGCAAGAGAAGCGGAAGCGAGCCCCCATTGTGCCTAGACCC
ATGTCTACATCTAGAAGCCTCTCTACAGCCTCCAATGTCAAGCAGACGGCCAAGAGCAGGCACAAGGCGACAACA
GAACCTCCCAACACAACACCTCTAGCCAAGCGCGGCTGGCTTGCTCGAGCCCTTGGCTGGGGCCATTCTTCCCGC
ACTGTTGACACGCAGAGCCGGCCACCAAGCAGCGGCCGCCTCGACTGGGTTCTTGTCGACGACTGGAGCGATGAA
AAAGACAAGGTGATGAAAGAAGGCCTGGCAAGACCCAAGGACTCCAAGCCAGTAGATGACACATTTGTCATTGGC
GTTCATGACTGGCGAGATCCCGATTTCTTAAACAAGCCTGCCGTGGCCAAGACATCTGACAAGACTATCAACCAA
AGAAAACCCCAAGAACCAAAGAGCACTCAAGAGGCTCAAGGCCTCAAGGGCGGCAGCATTACTCCCAGCAGCGGC
GAGTACAATCCAAACAGGGCCATTATTAAAGATGGAAAGGAAGCTGGCAGTGCTGGCTCTAAGACTGAGAGCAAG
GGAGTTGGCCTCATCGCGAAACTGTTTGGCGATGGCGCCGATGCAGATGAGCCGATTGAGGTTCTTGACAACGAC
TCGGCCGAAGTGGATGCTTTGAGTCACCACGAGTCTTCTCAGCACGAGGGCCTATGGGTTACAATTACGCCGGGC
AGCAGTGCTAGCTCCTTTTTTGACACGTTGCTCATCCTTGTCATTAGCCCTTTTCTGACCTTGACCGTTGTATAC
GCGCTACTTATTATTACCGTCACCTTCAAGCGTGTCTCCCATGACTCCATTGTTGCAACAGTCGCCGACAAGGCC
ACGACCGCGCTCGAGAACTACTACTGGGATTCCGCAGAGCGAAAATTTTCTGTCCCCGAATCCAGCGTCACCAAC
GCCTGA
Gene >OphauG2|7199
ATGCGGCCACCGCGCATCGCCATTCTTGCCATCGCCATCGCAGCCTTTATATTTCTCCTTTGCCGTCCCTTCATA
TCTGCCGGCTCCTCGTCCAATGCCGCGTCGTCGTACCCGGCTGAGGCCCGACCCACGTCCAAATCCGTCTTTGGT
TTCGTCTACGACAATACTCCATTTTGGCTATTCCCCCCAAACGCTGCCATCAGCTTGACAGACGACAACAGCACG
TCTTTTGCTGCGCGCCCGGCTGCCTTTGGTCCCAAGCTCGCCCCCAAGGGTCTCAGTGGCCAGCTTTGGGTTGGT
AGTGGTTTTGCTGAGGACAGTCTGGATGGCAATGGGGAGCTCGGCTGCAGTGACATACCCGGCTGGGGCAGCGGA
AACACCAGGGCTGCCCTGAAAAACTCGTTTCGTATTGGCATGCCCAGGATATCGGCCGCCCAGATCAAATCTGGT
CTGCCTAAACGTGGCGGAAGCCAGCACGAAACGCCCCCCCTGGCCCCATCGTCCAGCTCCAGCAATGATACCAAG
ACGGACAGTAATACCCTAGGCCACACCCCTCATAGCTTCATTGGACGTCGGGATTCGTCGGCTTCTTCTTCGTCT
CACGCCGATATACAGTCCATGCAAGAAGGCGCCGAGATACAGGGCAAGGTGGTGCTCCTGATGCGTGGCGGCTGT
GGCTTTCTGGAAAAGGTCATGTGGGCTCAGCGACGGGGCGCCGTCGCTGTCATTGTTGGCGACAATCAAAAGGGC
GGCCCCCTTATACAAATGTTTGCCCACGGCGACGAAGTTGAAAACGTGACGGTGCCGTCTGTATTCACCGCCCGG
ACCACTGCCCATCTACTTTCTTCTCTGACGCAACCTGGGAGCTTCATTGAGGATTCCCTCGATAATAACGGCAAA
CCTGTACTCAAGGTTCAACAGGGCACTCGGGCTCGGCAAGAGAAGCGGAAGCGAGCCCCCATTGTGCCTAGACCC
ATGTCTACATCTAGAAGCCTCTCTACAGCCTCCAATGTCAAGCAGACGGCCAAGAGCAGGCACAAGGCGACAACA
GAACCTCCCAACACAACACCTCTAGCCAAGCGCGGCTGGCTTGCTCGAGCCCTTGGCTGGGGCCATTCTTCCCGC
ACTGTTGACACGCAGAGCCGGCCACCAAGCAGCGGCCGCCTCGACTGGGTTCTTGTCGACGACTGGAGCGATGAA
AAAGACAAGGTGATGAAAGAAGGCCTGGCAAGACCCAAGGACTCCAAGCCAGTAGATGACACATTTGTCATTGGC
GTTCATGACTGGCGAGATCCCGATTTCTTAAACAAGCCTGCCGTGGCCAAGACATCTGACAAGACTATCAACCAA
AGAAAACCCCAAGAACCAAAGAGCACTCAAGAGGCTCAAGGCCTCAAGGGCGGCAGCATTACTCCCAGCAGCGGC
GAGTACAATCCAAACAGGGCCATTATTAAAGATGGAAAGGAAGCTGGCAGTGCTGGCTCTAAGACTGAGAGCAAG
GGAGTTGGCCTCATCGCGAAACTGTTTGGCGATGGCGCCGATGCAGATGAGCCGATTGAGGTTCTTGACAACGAC
TCGGCCGAAGTGGATGCTTTGAGTCACCACGAGTCTTCTCAGCACGAGGGCCTATGGGTTACAATTACGCCGGGC
AGCAGTGCTAGCTCCTTTTTTGACACGTTGCTCATCCTTGTCATTAGCCCTTTTCTGACCTTGACCGTTGTATAC
GCGCTACTTATTGTTCGTTCGAGCGTTCGAAGGCGACGATGGAGGGCTCCAAAGTCTGTTGTTGAACGATTGCCT
GTACGGACCTATCACACCGTTGCCGGGTCACCCAGCCTGTCTCCCAGATTACCGTCACCTTCAAGCGTGTCTCCC
ATGACTCCATTGTTGCAACAGTCGCCGACAAGGCCACGACCGCGCTCGAGAACTACTACTGGGATTCCGCAGAGC
GAAAATTTTCTGTCCCCGAATCCAGCGTCACCAACGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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