© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|7112 |
| Gene name | |
| Location | Contig_8:2302..3022 |
| Strand | + |
| Gene length (bp) | 720 |
| Transcript length (bp) | 720 |
| Coding sequence length (bp) | 720 |
| Protein length (aa) | 240 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00704 | Glyco_hydro_18 | Glycosyl hydrolases family 18 | 1.1E-18 | 15 | 190 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12713|CHI33_TRIHA | Endochitinase 33 OS=Trichoderma harzianum GN=chit33 PE=1 SV=1 | 13 | 238 | 2.0E-99 |
| sp|D4B4X4|CHI33_ARTBC | Class III chitinase ARB_03514 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03514 PE=1 SV=2 | 15 | 239 | 3.0E-72 |
| sp|P29025|CHI1_RHINI | Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1 | 15 | 234 | 5.0E-46 |
| sp|P29029|CHIT_YEAST | Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS1 PE=1 SV=2 | 11 | 228 | 1.0E-42 |
| sp|P29027|CHI2_RHIOL | Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1 | 12 | 234 | 8.0E-42 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12713|CHI33_TRIHA | Endochitinase 33 OS=Trichoderma harzianum GN=chit33 PE=1 SV=1 | 13 | 238 | 2.0E-99 |
| sp|D4B4X4|CHI33_ARTBC | Class III chitinase ARB_03514 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03514 PE=1 SV=2 | 15 | 239 | 3.0E-72 |
| sp|P29025|CHI1_RHINI | Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1 | 15 | 234 | 5.0E-46 |
| sp|P29029|CHIT_YEAST | Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS1 PE=1 SV=2 | 11 | 228 | 1.0E-42 |
| sp|P29027|CHI2_RHIOL | Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1 | 12 | 234 | 8.0E-42 |
| sp|P40953|CHI2_CANAL | Chitinase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT2 PE=1 SV=1 | 16 | 227 | 4.0E-41 |
| sp|P29026|CHI1_RHIOL | Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1 | 12 | 234 | 6.0E-41 |
| sp|P40954|CHI3_CANAL | Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT3 PE=1 SV=2 | 15 | 227 | 5.0E-40 |
| sp|P46876|CHI1_CANAX | Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2 | 15 | 239 | 2.0E-34 |
| sp|Q5AAH2|CHI1_CANAL | Chitinase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT1 PE=1 SV=1 | 15 | 234 | 2.0E-34 |
| sp|G5EB30|CHIA1_EMENI | Endochitinase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chiA PE=1 SV=1 | 15 | 238 | 2.0E-33 |
| sp|Q92223|CHIA1_EMEND | Endochitinase A OS=Emericella nidulans GN=chiA PE=2 SV=3 | 15 | 238 | 2.0E-33 |
| sp|Q4WEP7|CHIA1_ASPFU | Endochitinase A1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chiA1 PE=3 SV=1 | 13 | 222 | 2.0E-32 |
| sp|Q873Y0|CHIA1_ASPFM | Endochitinase A1 OS=Neosartorya fumigata GN=chiA1 PE=1 SV=1 | 13 | 222 | 2.0E-32 |
| sp|Q1EAR5|CHI2_COCIM | Endochitinase 2 OS=Coccidioides immitis (strain RS) GN=CTS2 PE=3 SV=2 | 14 | 222 | 5.0E-32 |
| sp|P54197|CHI2_COCP7 | Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2 | 14 | 222 | 6.0E-32 |
| sp|D4AT07|CHI1_ARTBC | Probable endochitinase ARB_07371 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07371 PE=3 SV=1 | 15 | 220 | 4.0E-30 |
| sp|A2QUQ2|CHIA1_ASPNC | Endochitinase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ctcA PE=2 SV=1 | 13 | 222 | 1.0E-25 |
| sp|P19172|CHIA_ARATH | Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2 | 11 | 219 | 2.0E-25 |
| sp|P29061|CHIB_TOBAC | Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1 | 15 | 220 | 3.0E-25 |
| sp|P36908|CHIA_CICAR | Acidic endochitinase OS=Cicer arietinum PE=2 SV=1 | 11 | 238 | 4.0E-25 |
| sp|P51614|CHIT3_VITVI | Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1 | 11 | 220 | 5.0E-24 |
| sp|P36910|CHIE_BETVU | Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1 | 12 | 219 | 1.0E-23 |
| sp|P29024|CHIA_PHAAN | Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1 | 13 | 220 | 2.0E-23 |
| sp|Q4U4T0|CHI2_METAN | Endochitinase 2 OS=Metarhizium anisopliae GN=chi2 PE=1 SV=1 | 12 | 229 | 4.0E-22 |
| sp|Q9C105|YKT4_SCHPO | Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1E7.04c PE=3 SV=1 | 16 | 222 | 5.0E-22 |
| sp|E9F9R9|CHI2_METRA | Endochitinase 2 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chi2 PE=3 SV=2 | 12 | 220 | 2.0E-21 |
| sp|P23472|CHLY_HEVBR | Hevamine-A OS=Hevea brasiliensis PE=1 SV=2 | 11 | 235 | 4.0E-21 |
| sp|P29060|CHIA_TOBAC | Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1 | 11 | 227 | 6.0E-21 |
| sp|E9ENC6|CHI3_METRA | Endochitinase 3 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chi3 PE=3 SV=1 | 10 | 238 | 8.0E-21 |
| sp|Q6QDR4|CHI3_METAN | Endochitinase 3 (Fragment) OS=Metarhizium anisopliae GN=chi3 PE=1 SV=1 | 10 | 227 | 3.0E-20 |
| sp|P17541|CHIA_CUCSA | Acidic endochitinase OS=Cucumis sativus PE=1 SV=1 | 7 | 219 | 3.0E-19 |
| sp|Q7GCM7|XIP1_ORYSJ | Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1 | 5 | 220 | 4.0E-10 |
| sp|P49347|CONB_CANEN | Concanavalin B OS=Canavalia ensiformis PE=1 SV=1 | 13 | 220 | 8.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7112 MLNWLTEHVGTAFRKDIQTCQAKHGKTLVLSIGGATYGQGGWQSTSEAEAAAEKVWAMFGPVQTGSNAPRPFGSA VIDGFDFDFEATTNNLPAFGTQLRSLMDKAGGKRFYLTAAPQCVFPDAAVGSTLDAVPFDFVMIQFYNNWCGVSN FQPGSQTQNAFNFDVWDRWAKGSKNPNVKALLGIPANVGAGGGYTRGEKLRAVINYCKKYSSFGGVMMWDMSQLY ANDGFLNEVLGDLA* |
| Coding | >OphauG2|7112 ATGCTGAACTGGCTGACGGAGCATGTGGGTACTGCGTTTAGAAAGGACATCCAGACGTGCCAGGCCAAGCACGGA AAGACACTTGTTCTATCGATTGGTGGAGCGACGTATGGTCAAGGTGGCTGGCAATCGACGAGCGAAGCTGAGGCG GCGGCCGAAAAGGTTTGGGCCATGTTTGGCCCTGTGCAAACGGGCAGCAATGCCCCACGACCCTTTGGCTCGGCT GTTATCGATGGCTTCGATTTTGATTTCGAGGCTACGACAAACAACTTGCCTGCCTTTGGCACACAGCTGCGCAGC CTCATGGACAAAGCTGGAGGCAAGCGCTTCTATCTCACAGCAGCGCCTCAATGTGTCTTCCCCGACGCTGCTGTT GGATCTACTCTTGACGCCGTGCCCTTTGATTTTGTTATGATTCAGTTTTATAATAACTGGTGCGGCGTGTCCAAC TTTCAGCCCGGTTCTCAGACGCAAAACGCCTTTAATTTTGACGTCTGGGACCGCTGGGCCAAGGGTAGCAAGAAC CCCAATGTCAAGGCGCTGCTCGGCATTCCTGCCAATGTAGGCGCCGGCGGAGGTTATACGCGCGGCGAAAAGCTG CGCGCGGTTATTAACTACTGCAAAAAGTACAGCAGCTTTGGCGGCGTCATGATGTGGGACATGTCGCAGCTGTAT GCCAACGATGGCTTCCTCAACGAGGTGCTTGGCGATTTGGCTTGA |
| Transcript | >OphauG2|7112 ATGCTGAACTGGCTGACGGAGCATGTGGGTACTGCGTTTAGAAAGGACATCCAGACGTGCCAGGCCAAGCACGGA AAGACACTTGTTCTATCGATTGGTGGAGCGACGTATGGTCAAGGTGGCTGGCAATCGACGAGCGAAGCTGAGGCG GCGGCCGAAAAGGTTTGGGCCATGTTTGGCCCTGTGCAAACGGGCAGCAATGCCCCACGACCCTTTGGCTCGGCT GTTATCGATGGCTTCGATTTTGATTTCGAGGCTACGACAAACAACTTGCCTGCCTTTGGCACACAGCTGCGCAGC CTCATGGACAAAGCTGGAGGCAAGCGCTTCTATCTCACAGCAGCGCCTCAATGTGTCTTCCCCGACGCTGCTGTT GGATCTACTCTTGACGCCGTGCCCTTTGATTTTGTTATGATTCAGTTTTATAATAACTGGTGCGGCGTGTCCAAC TTTCAGCCCGGTTCTCAGACGCAAAACGCCTTTAATTTTGACGTCTGGGACCGCTGGGCCAAGGGTAGCAAGAAC CCCAATGTCAAGGCGCTGCTCGGCATTCCTGCCAATGTAGGCGCCGGCGGAGGTTATACGCGCGGCGAAAAGCTG CGCGCGGTTATTAACTACTGCAAAAAGTACAGCAGCTTTGGCGGCGTCATGATGTGGGACATGTCGCAGCTGTAT GCCAACGATGGCTTCCTCAACGAGGTGCTTGGCGATTTGGCTTGA |
| Gene | >OphauG2|7112 ATGCTGAACTGGCTGACGGAGCATGTGGGTACTGCGTTTAGAAAGGACATCCAGACGTGCCAGGCCAAGCACGGA AAGACACTTGTTCTATCGATTGGTGGAGCGACGTATGGTCAAGGTGGCTGGCAATCGACGAGCGAAGCTGAGGCG GCGGCCGAAAAGGTTTGGGCCATGTTTGGCCCTGTGCAAACGGGCAGCAATGCCCCACGACCCTTTGGCTCGGCT GTTATCGATGGCTTCGATTTTGATTTCGAGGCTACGACAAACAACTTGCCTGCCTTTGGCACACAGCTGCGCAGC CTCATGGACAAAGCTGGAGGCAAGCGCTTCTATCTCACAGCAGCGCCTCAATGTGTCTTCCCCGACGCTGCTGTT GGATCTACTCTTGACGCCGTGCCCTTTGATTTTGTTATGATTCAGTTTTATAATAACTGGTGCGGCGTGTCCAAC TTTCAGCCCGGTTCTCAGACGCAAAACGCCTTTAATTTTGACGTCTGGGACCGCTGGGCCAAGGGTAGCAAGAAC CCCAATGTCAAGGCGCTGCTCGGCATTCCTGCCAATGTAGGCGCCGGCGGAGGTTATACGCGCGGCGAAAAGCTG CGCGCGGTTATTAACTACTGCAAAAAGTACAGCAGCTTTGGCGGCGTCATGATGTGGGACATGTCGCAGCTGTAT GCCAACGATGGCTTCCTCAACGAGGTGCTTGGCGATTTGGCTTGA |