Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|7088
Gene name
Location	Contig_791:5784..7801
Strand	-
Gene length (bp)	2017
Transcript length (bp)	1959
Coding sequence length (bp)	1959
Protein length (aa)	653

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF14599	zinc_ribbon_6	Zinc-ribbon	2.0E-26	422	479
PF05495	zf-CHY	CHY zinc finger	7.3E-20	247	320
PF13639	zf-RING_2	Ring finger domain	3.1E-07	375	417
PF14634	zf-RING_5	zinc-RING finger domain	1.0E-06	376	419

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O14099\|YERG_SCHPO	Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F3.16 PE=3 SV=1	201	485	1.0E-83
sp\|Q96PM5\|ZN363_HUMAN	RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1	246	481	3.0E-64
sp\|Q9CR50\|ZN363_MOUSE	RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1	244	481	6.0E-63
sp\|Q8VZK0\|MIEL1_ARATH	E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana GN=MIEL1 PE=1 SV=1	245	479	1.0E-57

GO

GO Term	Description	Terminal node
GO:0008270	zinc ion binding	Yes
GO:0003674	molecular_function	No
GO:0046914	transition metal ion binding	No
GO:0046872	metal ion binding	No
GO:0043169	cation binding	No
GO:0005488	binding	No
GO:0043167	ion binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|7088 MSTLVSEFIINPVLRQARRFSEISRSARPGQDDGDCCDESSPGSPSSDAVAMDSQLDAATDAHSDAAVAPCPRPD PLDVSPAPRLVDNTAAESSDIDDSDLISHIRGASKVRSIPEDDGMGRLRGVIQAINAQDISSAEKARRIHDALLE GYRASQSISPSNQQLSCDDSTPPWHPAGHDRQVSTPSRPLDSLRFWYSPSSDSSSSERFLLSEADLAPTYAPIRQ PKSSGEETPVVTPPDMSPPLGCHHYERNVKLQCSTCAKWYTCRLCHDAKEDHNLIRNETKNMLCMLCNTPQRASD VCVKCGEVAAQYYCKICKLWENRPTKPIYHCHDCGICRRGRGLGKDFFHCQKCQICIGVASQGSHRCIERSTDCD CPICGEYLFTSPRPVVFMACGHSIHRRCYNQHIEVSYKCPICSKSLLNMESQFRNMDAFIATQPMPPSFRDTKVT ILCNDCSAKSTVPYHWIGLKCSICRSYNTVQLSVHNNNGNRADSSLSGADQEAAQALEATNDATMRLHRASTVTR ADNVPGLGQWQHAPDVVVHQGHSAETDSFMASRANQMGTDSATQGWEPLDRRTAEMVAMGWDPRMLHASSDADSD DFEDVLGIFRSGFDDDDGSEPEGDESGQEDDDDQLGEEEEEEEDNMFLYGHR*
Coding	>OphauG2\|7088 ATGTCGACGCTTGTGTCCGAGTTCATCATCAACCCCGTTTTGCGCCAGGCACGCCGCTTCTCGGAAATATCTCGT TCTGCGAGGCCTGGCCAAGATGACGGCGACTGCTGTGACGAGTCGAGTCCCGGCAGTCCTTCCAGCGACGCTGTA GCCATGGACTCTCAACTCGACGCCGCGACGGACGCCCATAGCGATGCAGCGGTGGCGCCTTGCCCAAGACCCGAC CCTCTTGATGTTTCACCAGCTCCGAGACTCGTCGACAACACAGCCGCCGAATCATCAGATATCGATGACTCAGAT TTGATATCCCACATTAGGGGCGCTTCCAAGGTTCGGTCCATCCCCGAAGACGATGGTATGGGCAGACTACGAGGC GTGATTCAGGCCATCAATGCTCAAGACATCTCGTCTGCCGAGAAAGCGAGGCGCATCCATGATGCTTTGCTCGAG GGCTATCGTGCTTCTCAGTCCATATCGCCCAGTAATCAACAGCTCAGCTGCGACGACTCAACCCCGCCATGGCAC CCAGCCGGCCATGACCGCCAAGTCTCAACGCCCTCACGCCCCTTGGACTCCCTCAGGTTTTGGTACAGTCCGTCC AGTGACTCGTCATCTTCAGAAAGGTTCCTCCTCTCGGAAGCCGACTTGGCACCCACGTATGCACCAATTCGCCAA CCTAAGAGCTCTGGCGAGGAGACTCCAGTCGTGACTCCGCCAGATATGAGCCCTCCCCTTGGATGCCATCACTAT GAACGCAATGTCAAGCTGCAGTGCTCGACTTGCGCCAAGTGGTATACCTGCCGCTTGTGTCACGATGCCAAGGAG GATCATAATTTGATACGCAACGAAACAAAAAATATGCTCTGCATGCTTTGCAACACCCCCCAGAGGGCTTCGGAT GTTTGCGTCAAGTGTGGCGAGGTGGCTGCCCAATACTACTGCAAAATCTGCAAACTGTGGGAGAATAGGCCAACC AAGCCCATATATCACTGCCACGATTGTGGCATTTGCCGTCGCGGCCGTGGCCTAGGAAAAGACTTCTTCCACTGC CAGAAATGCCAGATATGCATTGGTGTCGCCTCCCAAGGCTCCCACAGGTGCATTGAGCGCTCGACTGATTGTGAC TGTCCCATCTGCGGCGAGTACCTCTTTACCTCGCCGAGGCCAGTTGTTTTTATGGCCTGCGGCCACAGCATTCAC AGGCGGTGCTACAACCAGCATATCGAGGTTTCTTACAAGTGCCCCATTTGCAGCAAGAGTCTGCTGAATATGGAG TCGCAATTCCGCAACATGGATGCTTTTATCGCAACTCAGCCAATGCCGCCGTCCTTTCGCGATACAAAGGTAACT ATTCTGTGCAATGACTGCTCGGCCAAAAGCACTGTTCCATACCACTGGATAGGTCTCAAGTGCTCGATATGCCGC TCATACAACACGGTACAGCTCTCGGTACATAATAACAACGGGAACCGGGCAGACTCGAGTCTCTCTGGGGCCGAT CAAGAGGCGGCTCAGGCCCTGGAAGCAACAAACGATGCCACCATGCGCTTGCATAGGGCGTCTACAGTGACGCGG GCCGACAATGTCCCTGGACTGGGTCAGTGGCAGCACGCGCCGGACGTCGTCGTACACCAAGGACACAGTGCCGAA ACAGACTCATTCATGGCGTCTCGGGCGAATCAGATGGGGACTGACTCAGCAACTCAAGGATGGGAGCCGCTGGAT CGGAGAACAGCTGAAATGGTTGCAATGGGTTGGGACCCGCGCATGTTACATGCGAGCTCTGACGCCGACTCGGAT GATTTTGAAGATGTTCTCGGCATCTTTAGAAGCGGCTTTGATGACGATGATGGTAGCGAGCCAGAAGGGGATGAA TCAGGCCAGGAAGACGATGACGATCAACTCGGCGAGGAGGAGGAGGAGGAAGAGGATAATATGTTCCTTTATGGA CATCGATGA
Transcript	>OphauG2\|7088 ATGTCGACGCTTGTGTCCGAGTTCATCATCAACCCCGTTTTGCGCCAGGCACGCCGCTTCTCGGAAATATCTCGT TCTGCGAGGCCTGGCCAAGATGACGGCGACTGCTGTGACGAGTCGAGTCCCGGCAGTCCTTCCAGCGACGCTGTA GCCATGGACTCTCAACTCGACGCCGCGACGGACGCCCATAGCGATGCAGCGGTGGCGCCTTGCCCAAGACCCGAC CCTCTTGATGTTTCACCAGCTCCGAGACTCGTCGACAACACAGCCGCCGAATCATCAGATATCGATGACTCAGAT TTGATATCCCACATTAGGGGCGCTTCCAAGGTTCGGTCCATCCCCGAAGACGATGGTATGGGCAGACTACGAGGC GTGATTCAGGCCATCAATGCTCAAGACATCTCGTCTGCCGAGAAAGCGAGGCGCATCCATGATGCTTTGCTCGAG GGCTATCGTGCTTCTCAGTCCATATCGCCCAGTAATCAACAGCTCAGCTGCGACGACTCAACCCCGCCATGGCAC CCAGCCGGCCATGACCGCCAAGTCTCAACGCCCTCACGCCCCTTGGACTCCCTCAGGTTTTGGTACAGTCCGTCC AGTGACTCGTCATCTTCAGAAAGGTTCCTCCTCTCGGAAGCCGACTTGGCACCCACGTATGCACCAATTCGCCAA CCTAAGAGCTCTGGCGAGGAGACTCCAGTCGTGACTCCGCCAGATATGAGCCCTCCCCTTGGATGCCATCACTAT GAACGCAATGTCAAGCTGCAGTGCTCGACTTGCGCCAAGTGGTATACCTGCCGCTTGTGTCACGATGCCAAGGAG GATCATAATTTGATACGCAACGAAACAAAAAATATGCTCTGCATGCTTTGCAACACCCCCCAGAGGGCTTCGGAT GTTTGCGTCAAGTGTGGCGAGGTGGCTGCCCAATACTACTGCAAAATCTGCAAACTGTGGGAGAATAGGCCAACC AAGCCCATATATCACTGCCACGATTGTGGCATTTGCCGTCGCGGCCGTGGCCTAGGAAAAGACTTCTTCCACTGC CAGAAATGCCAGATATGCATTGGTGTCGCCTCCCAAGGCTCCCACAGGTGCATTGAGCGCTCGACTGATTGTGAC TGTCCCATCTGCGGCGAGTACCTCTTTACCTCGCCGAGGCCAGTTGTTTTTATGGCCTGCGGCCACAGCATTCAC AGGCGGTGCTACAACCAGCATATCGAGGTTTCTTACAAGTGCCCCATTTGCAGCAAGAGTCTGCTGAATATGGAG TCGCAATTCCGCAACATGGATGCTTTTATCGCAACTCAGCCAATGCCGCCGTCCTTTCGCGATACAAAGGTAACT ATTCTGTGCAATGACTGCTCGGCCAAAAGCACTGTTCCATACCACTGGATAGGTCTCAAGTGCTCGATATGCCGC TCATACAACACGGTACAGCTCTCGGTACATAATAACAACGGGAACCGGGCAGACTCGAGTCTCTCTGGGGCCGAT CAAGAGGCGGCTCAGGCCCTGGAAGCAACAAACGATGCCACCATGCGCTTGCATAGGGCGTCTACAGTGACGCGG GCCGACAATGTCCCTGGACTGGGTCAGTGGCAGCACGCGCCGGACGTCGTCGTACACCAAGGACACAGTGCCGAA ACAGACTCATTCATGGCGTCTCGGGCGAATCAGATGGGGACTGACTCAGCAACTCAAGGATGGGAGCCGCTGGAT CGGAGAACAGCTGAAATGGTTGCAATGGGTTGGGACCCGCGCATGTTACATGCGAGCTCTGACGCCGACTCGGAT GATTTTGAAGATGTTCTCGGCATCTTTAGAAGCGGCTTTGATGACGATGATGGTAGCGAGCCAGAAGGGGATGAA TCAGGCCAGGAAGACGATGACGATCAACTCGGCGAGGAGGAGGAGGAGGAAGAGGATAATATGTTCCTTTATGGA CATCGATGA
Gene	>OphauG2\|7088 ATGTCGACGCTTGTGTCCGAGTTCATCATCAACCCCGTTTTGCGCCAGGCACGCCGCTTCTCGGAAATATCTCGT TCTGCGAGGCCTGGCCAAGATGACGGCGACTGCTGTGACGAGTCGAGTCCCGGCAGTCCTTCCAGCGACGCTGTA GCCATGGACTCTCAACTCGACGCCGCGACGGACGCCCATAGCGATGCAGCGGTGGCGCCTTGCCCAAGACCCGAC CCTCTTGATGTTTCACCAGCTCCGAGACTCGTCGACAACACAGCCGCCGAATCATCAGATATCGATGACTCAGAT TTGATATCCCACATTAGGGGCGCTTCCAAGGTTCGGTCCATCCCCGAAGACGATGGTATGGGCAGACTACGAGGC GTGATTCAGGCCATCAATGCTCAAGACATCTCGTCTGCCGAGAAAGCGAGGCGCATCCATGATGCTTTGCTCGAG GGCTATCGTGCTTCTCAGTCCATATCGCCCAGTAATCAACAGCTCAGCTGCGACGACTCAACCCCGCCATGGCAC CCAGCCGGCCATGACCGCCAAGTCTCAACGCCCTCACGCCCCTTGGACTCCCTCAGGTTTTGGTACAGTCCGTCC AGTGACTCGTCATCTTCAGAAAGGTTCCTCCTCTCGGAAGCCGACTTGGCACCCACGTATGCACCAATTCGCCAA CCTAAGAGCTCTGGCGAGGAGACTCCAGTCGTGACTCCGCCAGATATGAGCCCTCCCCTTGGATGCCATCACTAT GAACGCAATGTCAAGCTGCAGTGCTCGACTTGCGCCAAGTGGTATACCTGCCGCTTGTGTCACGATGCCAAGGAG GATCATAATTTGATACGCAACGAAACAAAAAATATGCTCTGCATGCTTTGCAACACCCCCCAGAGGGCTTCGGAT GTTTGCGTCAAGTGTGGCGAGGTGGCTGCCCAATACTACTGCAAAATCTGCAAACTGTGGGAGAATAGGCCAACC AAGCCCATATATCACTGCCACGATTGTGGCATTTGCCGTCGCGGCCGTGGCCTAGGAAAAGACTTCTTCCACTGC CAGGTATGCCACAATGCTTGACCCTCGAATATAGGGCAAAGTGCTGACGCGACGATTCCAGAAATGCCAGATATG CATTGGTGTCGCCTCCCAAGGCTCCCACAGGTGCATTGAGCGCTCGACTGATTGTGACTGTCCCATCTGCGGCGA GTACCTCTTTACCTCGCCGAGGCCAGTTGTTTTTATGGCCTGCGGCCACAGCATTCACAGGCGGTGCTACAACCA GCATATCGAGGTTTCTTACAAGTGCCCCATTTGCAGCAAGAGTCTGCTGAATATGGAGTCGCAATTCCGCAACAT GGATGCTTTTATCGCAACTCAGCCAATGCCGCCGTCCTTTCGCGATACAAAGGTAACTATTCTGTGCAATGACTG CTCGGCCAAAAGCACTGTTCCATACCACTGGATAGGTCTCAAGTGCTCGATATGCCGCTCATACAACACGGTACA GCTCTCGGTACATAATAACAACGGGAACCGGGCAGACTCGAGTCTCTCTGGGGCCGATCAAGAGGCGGCTCAGGC CCTGGAAGCAACAAACGATGCCACCATGCGCTTGCATAGGGCGTCTACAGTGACGCGGGCCGACAATGTCCCTGG ACTGGGTCAGTGGCAGCACGCGCCGGACGTCGTCGTACACCAAGGACACAGTGCCGAAACAGACTCATTCATGGC GTCTCGGGCGAATCAGATGGGGACTGACTCAGCAACTCAAGGATGGGAGCCGCTGGATCGGAGAACAGCTGAAAT GGTTGCAATGGGTTGGGACCCGCGCATGTTACATGCGAGCTCTGACGCCGACTCGGATGATTTTGAAGATGTTCT CGGCATCTTTAGAAGCGGCTTTGATGACGATGATGGTAGCGAGCCAGAAGGGGATGAATCAGGCCAGGAAGACGA TGACGATCAACTCGGCGAGGAGGAGGAGGAGGAAGAGGATAATATGTTCCTTTATGGACATCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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