Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7058
Gene name
LocationContig_787:70..1126
Strand+
Gene length (bp)1056
Transcript length (bp)816
Coding sequence length (bp)816
Protein length (aa) 272

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 2.6E-25 11 210

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O69060|HTXA_PSEST Probable alpha-ketoglutarate-dependent hypophosphite dioxygenase OS=Pseudomonas stutzeri GN=htxA PE=3 SV=1 6 236 2.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7058
MAASPDQVASFNQNGFLIVKDFLTPDQTRDLQKWAQQVHDLEPSDTSDFMPYEEINASGQRVLCRTENFVDAHSG
FNSLLRGDRLVQLVGSVSGEAMRLFKEKINYKLSGSGGFAPHIDANAYTHIAKVKHLTVLLSVDQSSQANGCLEV
VAASHDMDIPLDETTRCIQDGWVKRQAWTPIELEPGQLVIFSSHLAHRSGANRSKHSRRAIYATYNCASEGDLHQ
EYYADRKREWPATHMRKAGERYEKGSRVYAYGSPMLSVEAGHQVAF*
Coding >OphauG2|7058
ATGGCTGCCTCGCCGGACCAAGTGGCCTCATTCAACCAAAATGGCTTCTTGATTGTCAAAGACTTTCTCACTCCT
GACCAGACCCGTGATTTGCAGAAATGGGCGCAGCAAGTCCACGACTTGGAGCCAAGCGACACGTCTGACTTTATG
CCGTACGAGGAAATCAATGCCAGCGGCCAGCGCGTGCTCTGCCGCACCGAAAACTTTGTCGACGCGCACTCGGGC
TTCAACAGCCTGCTGCGAGGCGACAGGCTGGTGCAGCTCGTGGGCAGTGTTTCGGGAGAAGCCATGAGGCTCTTT
AAGGAAAAGATCAACTACAAGCTGTCTGGCAGTGGCGGCTTTGCTCCTCATATCGACGCCAATGCCTACACGCAC
ATTGCAAAGGTCAAGCACTTGACAGTCCTGCTCAGCGTGGACCAGTCGAGCCAGGCAAACGGCTGTCTCGAGGTG
GTGGCGGCCAGCCACGACATGGATATTCCTCTGGACGAGACGACCAGATGTATCCAAGACGGCTGGGTCAAGCGT
CAGGCCTGGACACCCATTGAGCTCGAGCCGGGCCAGCTCGTCATCTTTTCCTCGCATCTGGCCCATCGCAGCGGC
GCCAACAGGAGCAAGCATAGCCGGCGGGCCATTTACGCAACCTACAACTGTGCCAGCGAGGGCGATTTGCACCAA
GAATACTATGCCGACAGGAAGCGAGAGTGGCCGGCAACGCACATGCGAAAGGCGGGGGAGAGATATGAAAAGGGG
TCGCGCGTGTATGCGTACGGCTCGCCAATGCTGAGTGTAGAGGCAGGCCATCAGGTGGCCTTTTGA
Transcript >OphauG2|7058
ATGGCTGCCTCGCCGGACCAAGTGGCCTCATTCAACCAAAATGGCTTCTTGATTGTCAAAGACTTTCTCACTCCT
GACCAGACCCGTGATTTGCAGAAATGGGCGCAGCAAGTCCACGACTTGGAGCCAAGCGACACGTCTGACTTTATG
CCGTACGAGGAAATCAATGCCAGCGGCCAGCGCGTGCTCTGCCGCACCGAAAACTTTGTCGACGCGCACTCGGGC
TTCAACAGCCTGCTGCGAGGCGACAGGCTGGTGCAGCTCGTGGGCAGTGTTTCGGGAGAAGCCATGAGGCTCTTT
AAGGAAAAGATCAACTACAAGCTGTCTGGCAGTGGCGGCTTTGCTCCTCATATCGACGCCAATGCCTACACGCAC
ATTGCAAAGGTCAAGCACTTGACAGTCCTGCTCAGCGTGGACCAGTCGAGCCAGGCAAACGGCTGTCTCGAGGTG
GTGGCGGCCAGCCACGACATGGATATTCCTCTGGACGAGACGACCAGATGTATCCAAGACGGCTGGGTCAAGCGT
CAGGCCTGGACACCCATTGAGCTCGAGCCGGGCCAGCTCGTCATCTTTTCCTCGCATCTGGCCCATCGCAGCGGC
GCCAACAGGAGCAAGCATAGCCGGCGGGCCATTTACGCAACCTACAACTGTGCCAGCGAGGGCGATTTGCACCAA
GAATACTATGCCGACAGGAAGCGAGAGTGGCCGGCAACGCACATGCGAAAGGCGGGGGAGAGATATGAAAAGGGG
TCGCGCGTGTATGCGTACGGCTCGCCAATGCTGAGTGTAGAGGCAGGCCATCAGGTGGCCTTTTGA
Gene >OphauG2|7058
ATGGCTGCCTCGCCGGACCAAGTGGCCTCATTCAACCAAAATGGCTTCTTGATTGTCAAAGACTTTCTCACTCCT
GACCAGACCCGTGATTTGCAGAAATGGGCGCAGCAAGTCCACGACTTGGAGCCAAGCGACACGTCTGACTTTATG
CCGTACGAGGTTCGAGTCCCTCGTCCCTCGTGTCCATAGTCTCCAGGTTGGTGGCGGCGCTCTTAGACTCGCGCA
GGAAATCAATGCCAGCGGCCAGCGCGTGCTCTGCCGCACCGAAAACTTTGTCGACGCGCACTCGGGCTTCAACAG
CCTGCTGCGAGGCGACAGGCTGGTGCAGCTCGTGGGCAGTGTTTCGGGAGAAGCCATGAGGCTCTTTAAGGAAAA
GATCAACTACAAGCTGTCTGGCAGTGGTATGGGCAGCAAGACTTGGTGGCGAGGACCAAAAAGACTAATGTGCCT
TGACAGGCGGCTTTGCTCCTCATATCGACGCCAATGCCTACACGCACATTGCAAAGGTCAAGCACTTGACAGTCC
TGCTCAGCGTGGACCAGTCGAGCCAGGCAAACGGCTGTCTCGAGGTGGTGGCGGCCAGCCACGACATGGATATTC
CTCTGGACGAGACGACCAGATGTATCCAAGACGGCTGGGTCAAGCGTCAGGCCTGGACACCCATTGAGCTCGAGC
CGGGTAAGAAGAATGGAGGAGCAAGGGAGAAGAAGGGAGAAGAAAGCAAAGAAGAAAAAAAAGAAGAAGAAAAGA
GCCTTTTCCTGTTGATGGAAAGCTCAAGTGCTGACTCGTCGTCTAGGCCAGCTCGTCATCTTTTCCTCGCATCTG
GCCCATCGCAGCGGCGCCAACAGGAGCAAGCATAGCCGGCGGGCCATTTACGCAACCTACAACTGTGCCAGCGAG
GGCGATTTGCACCAAGAATACTATGCCGACAGGAAGCGAGAGTGGCCGGCAACGCACATGCGAAAGGCGGGGGAG
AGATATGAAAAGGGGTCGCGCGTGTATGCGTACGGCTCGCCAATGCTGAGTGTAGAGGCAGGCCATCAGGTGGCC
TTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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