© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|7045 |
| Gene name | |
| Location | Contig_783:5256..6937 |
| Strand | + |
| Gene length (bp) | 1681 |
| Transcript length (bp) | 1617 |
| Coding sequence length (bp) | 1617 |
| Protein length (aa) | 539 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00890 | FAD_binding_2 | FAD binding domain | 1.1E-41 | 10 | 504 |
| PF01266 | DAO | FAD dependent oxidoreductase | 4.3E-14 | 10 | 205 |
| PF12831 | FAD_oxidored | FAD dependent oxidoreductase | 2.5E-07 | 10 | 46 |
| PF03486 | HI0933_like | HI0933-like protein | 4.5E-06 | 10 | 47 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.3E-05 | 13 | 45 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q59327|OASD_COMTE | 3-oxo-5-alpha-steroid 4-dehydrogenase OS=Comamonas testosteroni PE=1 SV=1 | 25 | 499 | 2.0E-68 |
| sp|P83223|FRDA_SHEON | Fumarate reductase flavoprotein subunit OS=Shewanella oneidensis (strain MR-1) GN=SO_0970 PE=1 SV=2 | 1 | 530 | 3.0E-17 |
| sp|Q07WU7|FRDA_SHEFN | Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=fccA PE=1 SV=2 | 23 | 530 | 4.0E-16 |
| sp|P0C278|FRDA_SHEFR | Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina GN=fccA PE=1 SV=1 | 23 | 530 | 5.0E-16 |
| sp|O13755|OSM1_SCHPO | Fumarate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=osm1 PE=3 SV=1 | 2 | 530 | 2.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q59327|OASD_COMTE | 3-oxo-5-alpha-steroid 4-dehydrogenase OS=Comamonas testosteroni PE=1 SV=1 | 25 | 499 | 2.0E-68 |
| sp|P83223|FRDA_SHEON | Fumarate reductase flavoprotein subunit OS=Shewanella oneidensis (strain MR-1) GN=SO_0970 PE=1 SV=2 | 1 | 530 | 3.0E-17 |
| sp|Q07WU7|FRDA_SHEFN | Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=fccA PE=1 SV=2 | 23 | 530 | 4.0E-16 |
| sp|P0C278|FRDA_SHEFR | Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina GN=fccA PE=1 SV=1 | 23 | 530 | 5.0E-16 |
| sp|O13755|OSM1_SCHPO | Fumarate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=osm1 PE=3 SV=1 | 2 | 530 | 2.0E-12 |
| sp|Q9Z4P0|FRD2_SHEFN | Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=ifcA PE=1 SV=1 | 260 | 533 | 3.0E-10 |
| sp|Q8CVD0|URDA_SHEON | Urocanate reductase OS=Shewanella oneidensis (strain MR-1) GN=urdA PE=1 SV=1 | 10 | 530 | 2.0E-09 |
| sp|P32614|FRDS_YEAST | Fumarate reductase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FRD1 PE=1 SV=1 | 251 | 526 | 3.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7045 MADDTQKKPDVIVVGGGLSGMCAAVAAAEEGARVTVLDRGFGGGASFISGGVVYAGGGTKYQAQAGYHDTPDNMF CYLKHEAGNVVDDAVLRRFCNESVSNLEWLEGHGARFSGAMPSFRTSYPAGEYHLHYSGNEMAFSAASVAKPAPR GHRAVGQGLSEMEMTGAALWGAIYHSALRLGVRLEPAARVDKLLADSEGRVKGVGYRCLSDSAPWLVASYKWLTH SANRYQTMIPALSRLYNGVASFIWHKGAVQKCLEAPAVILAAGGFIMNDEMTRAFVPWASQTAPLGTAGDDGQGI RLGQSVRGRVSHMDRMSAWRFIYPPEALSEGIVLSPKGERLMAEDSYGAFLTEAMMKRASGHGFLILDSLQWEKF KSQIQVQTRGMWRFLVNYIRVWHHKSATSIEELANKFSIDASNMREAVEAYNKAIINSEPDPVEKVNYRSVISSP PFYGIDISVRSSGFMMVLGLTLGGLDVDGETGMVLNEEGKTIPGLYAAGRNAVGICSNRYVSGLSLADCVFSGRR AGRHAFQNQTTWR* |
| Coding | >OphauG2|7045 ATGGCCGACGACACGCAGAAGAAGCCAGACGTCATTGTTGTTGGAGGCGGCCTTTCGGGCATGTGCGCCGCCGTG GCGGCTGCTGAGGAGGGCGCCCGCGTCACGGTTCTGGATCGCGGCTTTGGCGGCGGCGCGTCCTTCATTTCAGGG GGCGTGGTGTACGCAGGAGGCGGCACCAAGTATCAGGCACAAGCGGGATACCACGATACTCCTGACAATATGTTT TGTTACCTGAAGCATGAAGCTGGAAACGTGGTTGACGACGCTGTGTTGAGGAGATTCTGCAACGAGAGCGTCTCT AATCTCGAGTGGTTGGAAGGGCACGGGGCGAGATTCTCGGGCGCCATGCCGTCGTTTAGAACCAGCTATCCCGCG GGGGAATACCATCTCCATTACTCGGGGAATGAAATGGCGTTCTCTGCGGCCTCGGTGGCCAAGCCGGCGCCTCGG GGCCATCGGGCCGTGGGCCAGGGGCTCAGCGAGATGGAAATGACGGGTGCGGCTCTCTGGGGCGCCATTTACCAC TCGGCCCTGAGACTGGGTGTCAGGCTTGAGCCGGCCGCCAGGGTGGACAAGTTGTTGGCCGACAGTGAGGGACGA GTAAAGGGAGTGGGCTATCGCTGCTTGAGCGACTCTGCTCCATGGCTGGTCGCGTCGTACAAGTGGCTGACGCAC AGTGCCAACCGGTATCAAACCATGATTCCCGCCTTGTCCAGGCTCTACAATGGGGTTGCAAGTTTCATCTGGCAC AAGGGGGCTGTGCAAAAATGCCTCGAGGCGCCTGCTGTCATTCTGGCTGCTGGAGGCTTCATCATGAATGATGAA ATGACGCGGGCTTTTGTCCCTTGGGCCTCCCAGACGGCGCCGCTGGGAACGGCCGGGGACGATGGACAGGGCATC AGGCTCGGCCAATCAGTCCGCGGCCGCGTCTCGCACATGGACCGCATGTCAGCTTGGAGGTTTATCTATCCGCCC GAAGCCCTAAGCGAGGGCATCGTGCTATCTCCCAAGGGCGAGCGACTCATGGCTGAAGATTCATACGGGGCTTTT TTGACAGAAGCCATGATGAAGCGAGCCAGTGGCCACGGGTTTCTGATTCTCGATTCCTTGCAGTGGGAGAAATTC AAGAGCCAGATCCAGGTCCAGACACGCGGCATGTGGAGATTTCTCGTCAACTACATCAGGGTGTGGCATCACAAG AGCGCAACGTCGATTGAGGAGCTGGCAAACAAGTTTTCAATAGACGCAAGCAACATGCGGGAAGCTGTTGAAGCG TACAACAAGGCGATTATAAACAGCGAGCCAGACCCAGTTGAAAAGGTGAATTATCGATCTGTTATTTCCTCGCCC CCATTCTATGGGATTGATATCTCTGTGAGGTCGAGCGGCTTCATGATGGTCCTGGGGCTGACTCTTGGCGGGCTT GATGTTGACGGGGAGACGGGCATGGTTCTGAATGAAGAAGGAAAGACGATTCCAGGACTGTATGCTGCGGGGAGG AATGCTGTTGGGATCTGCTCGAATCGCTACGTGTCGGGGCTGTCTCTTGCAGATTGTGTGTTTTCGGGGCGAAGA GCAGGACGGCATGCTTTCCAGAACCAGACTACTTGGAGATGA |
| Transcript | >OphauG2|7045 ATGGCCGACGACACGCAGAAGAAGCCAGACGTCATTGTTGTTGGAGGCGGCCTTTCGGGCATGTGCGCCGCCGTG GCGGCTGCTGAGGAGGGCGCCCGCGTCACGGTTCTGGATCGCGGCTTTGGCGGCGGCGCGTCCTTCATTTCAGGG GGCGTGGTGTACGCAGGAGGCGGCACCAAGTATCAGGCACAAGCGGGATACCACGATACTCCTGACAATATGTTT TGTTACCTGAAGCATGAAGCTGGAAACGTGGTTGACGACGCTGTGTTGAGGAGATTCTGCAACGAGAGCGTCTCT AATCTCGAGTGGTTGGAAGGGCACGGGGCGAGATTCTCGGGCGCCATGCCGTCGTTTAGAACCAGCTATCCCGCG GGGGAATACCATCTCCATTACTCGGGGAATGAAATGGCGTTCTCTGCGGCCTCGGTGGCCAAGCCGGCGCCTCGG GGCCATCGGGCCGTGGGCCAGGGGCTCAGCGAGATGGAAATGACGGGTGCGGCTCTCTGGGGCGCCATTTACCAC TCGGCCCTGAGACTGGGTGTCAGGCTTGAGCCGGCCGCCAGGGTGGACAAGTTGTTGGCCGACAGTGAGGGACGA GTAAAGGGAGTGGGCTATCGCTGCTTGAGCGACTCTGCTCCATGGCTGGTCGCGTCGTACAAGTGGCTGACGCAC AGTGCCAACCGGTATCAAACCATGATTCCCGCCTTGTCCAGGCTCTACAATGGGGTTGCAAGTTTCATCTGGCAC AAGGGGGCTGTGCAAAAATGCCTCGAGGCGCCTGCTGTCATTCTGGCTGCTGGAGGCTTCATCATGAATGATGAA ATGACGCGGGCTTTTGTCCCTTGGGCCTCCCAGACGGCGCCGCTGGGAACGGCCGGGGACGATGGACAGGGCATC AGGCTCGGCCAATCAGTCCGCGGCCGCGTCTCGCACATGGACCGCATGTCAGCTTGGAGGTTTATCTATCCGCCC GAAGCCCTAAGCGAGGGCATCGTGCTATCTCCCAAGGGCGAGCGACTCATGGCTGAAGATTCATACGGGGCTTTT TTGACAGAAGCCATGATGAAGCGAGCCAGTGGCCACGGGTTTCTGATTCTCGATTCCTTGCAGTGGGAGAAATTC AAGAGCCAGATCCAGGTCCAGACACGCGGCATGTGGAGATTTCTCGTCAACTACATCAGGGTGTGGCATCACAAG AGCGCAACGTCGATTGAGGAGCTGGCAAACAAGTTTTCAATAGACGCAAGCAACATGCGGGAAGCTGTTGAAGCG TACAACAAGGCGATTATAAACAGCGAGCCAGACCCAGTTGAAAAGGTGAATTATCGATCTGTTATTTCCTCGCCC CCATTCTATGGGATTGATATCTCTGTGAGGTCGAGCGGCTTCATGATGGTCCTGGGGCTGACTCTTGGCGGGCTT GATGTTGACGGGGAGACGGGCATGGTTCTGAATGAAGAAGGAAAGACGATTCCAGGACTGTATGCTGCGGGGAGG AATGCTGTTGGGATCTGCTCGAATCGCTACGTGTCGGGGCTGTCTCTTGCAGATTGTGTGTTTTCGGGGCGAAGA GCAGGACGGCATGCTTTCCAGAACCAGACTACTTGGAGATGA |
| Gene | >OphauG2|7045 ATGGCCGACGACACGCAGAAGAAGCCAGACGTCATTGTTGTTGGAGGCGGCCTTTCGGGCATGTGCGCCGCCGTG GCGGCTGCTGAGGAGGGCGCCCGCGTCACGGTTCTGGATCGCGGCTTTGGCGGCGGCGCGTCCTTCATTTCAGGG GGCGTGGTGTACGCAGGAGGCGGCACCAAGTATCAGGCACAAGCGGGATACCACGATACTCCTGACAATATGTTT TGTTACCTGAAGCATGAAGCTGGAAACGTGGTTGACGACGCTGTGTTGAGGAGATTCTGCAACGAGAGCGTCTCT AATCTCGAGTGGTTGGAAGGGCACGGGGCGAGATTCTCGGGCGCCATGCCGTCGTTTAGAACCAGCTATCCCGCG GGGGAATACCATCTCCATTACTCGGGGAATGAAATGGCGTTCTCTGCGGCCTCGGTGGCCAAGCCGGCGCCTCGG GGCCATCGGGCCGTGGGCCAGGGGCTCAGCGAGATGGAAATGACGGGTGCGGCTCTCTGGGGCGCCATTTACCAC TCGGCCCTGAGACTGGGTGTCAGGCTTGAGCCGGCCGCCAGGGTGGACAAGTTGTTGGCCGACAGTGAGGGACGA GTAAAGGGAGTGGGCTATCGCTGCTTGAGCGACTCTGCTCCATGGCTGGTCGCGTCGTACAAGTGGCTGACGCAC AGTGCCAACCGGTATCAAACCATGATTCCCGCCTTGTCCAGGCTCTACAATGGGGTTGCAAGTTTCATCTGGCAC AAGGGGGCTGTGCAAAAATGCCTCGAGGCGCCTGCTGTCATTCTGGCTGCTGGAGGCTTCATCAGTGAGTGCCTC ACCACCACACATGTCTTGCTGCCACGATAACCCCATACTCATACAAAACCAAGTGAATGATGAAATGACGCGGGC TTTTGTCCCTTGGGCCTCCCAGACGGCGCCGCTGGGAACGGCCGGGGACGATGGACAGGGCATCAGGCTCGGCCA ATCAGTCCGCGGCCGCGTCTCGCACATGGACCGCATGTCAGCTTGGAGGTTTATCTATCCGCCCGAAGCCCTAAG CGAGGGCATCGTGCTATCTCCCAAGGGCGAGCGACTCATGGCTGAAGATTCATACGGGGCTTTTTTGACAGAAGC CATGATGAAGCGAGCCAGTGGCCACGGGTTTCTGATTCTCGATTCCTTGCAGTGGGAGAAATTCAAGAGCCAGAT CCAGGTCCAGACACGCGGCATGTGGAGATTTCTCGTCAACTACATCAGGGTGTGGCATCACAAGAGCGCAACGTC GATTGAGGAGCTGGCAAACAAGTTTTCAATAGACGCAAGCAACATGCGGGAAGCTGTTGAAGCGTACAACAAGGC GATTATAAACAGCGAGCCAGACCCAGTTGAAAAGGTGAATTATCGATCTGTTATTTCCTCGCCCCCATTCTATGG GATTGATATCTCTGTGAGGTCGAGCGGCTTCATGATGGTCCTGGGGCTGACTCTTGGCGGGCTTGATGTTGACGG GGAGACGGGCATGGTTCTGAATGAAGAAGGAAAGACGATTCCAGGACTGTATGCTGCGGGGAGGAATGCTGTTGG GATCTGCTCGAATCGCTACGTGTCGGGGCTGTCTCTTGCAGATTGTGTGTTTTCGGGGCGAAGAGCAGGACGGCA TGCTTTCCAGAACCAGACTACTTGGAGATGA |