Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7020
Gene name
LocationContig_777:7014..7977
Strand+
Gene length (bp)963
Transcript length (bp)963
Coding sequence length (bp)963
Protein length (aa) 321

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9.7E-14 86 156

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4IE79|PPIL4_GIBZE Peptidyl-prolyl cis-trans isomerase-like 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CYP6 PE=3 SV=2 61 234 1.0E-79
sp|Q5ARI5|PPIL4_EMENI Peptidyl-prolyl cis-trans isomerase-like 4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cyp6 PE=3 SV=1 52 260 5.0E-72
sp|Q4WAQ9|PPIL4_ASPFU Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cyp6 PE=3 SV=1 31 267 3.0E-71
sp|Q2U256|PPIL4_ASPOR Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cyp6 PE=3 SV=1 31 262 1.0E-70
sp|Q871A4|PPIL4_NEUCR Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cyp-6 PE=3 SV=1 64 226 4.0E-64
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Swissprot ID Swissprot Description Start End E-value
sp|Q4IE79|PPIL4_GIBZE Peptidyl-prolyl cis-trans isomerase-like 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CYP6 PE=3 SV=2 61 234 1.0E-79
sp|Q5ARI5|PPIL4_EMENI Peptidyl-prolyl cis-trans isomerase-like 4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cyp6 PE=3 SV=1 52 260 5.0E-72
sp|Q4WAQ9|PPIL4_ASPFU Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cyp6 PE=3 SV=1 31 267 3.0E-71
sp|Q2U256|PPIL4_ASPOR Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cyp6 PE=3 SV=1 31 262 1.0E-70
sp|Q871A4|PPIL4_NEUCR Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cyp-6 PE=3 SV=1 64 226 4.0E-64
sp|P0C1I6|PPIL4_RHIO9 Peptidyl-prolyl cis-trans isomerase-like 4 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=cyp13 PE=3 SV=1 50 215 9.0E-57
sp|Q6Q151|CYP59_ARATH Peptidyl-prolyl cis-trans isomerase CYP59 OS=Arabidopsis thaliana GN=CYP59 PE=1 SV=1 36 214 2.0E-48
sp|P0CP88|PPIL4_CRYNJ Peptidyl-prolyl cis-trans isomerase-like 4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CYP6 PE=3 SV=1 61 175 3.0E-48
sp|P0CP89|PPIL4_CRYNB Peptidyl-prolyl cis-trans isomerase-like 4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CYP6 PE=3 SV=1 61 175 3.0E-48
sp|P0C196|PPIL4_USTMA Peptidyl-prolyl cis-trans isomerase-like 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CYP6 PE=3 SV=1 65 175 8.0E-47
sp|Q8WUA2|PPIL4_HUMAN Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4 PE=1 SV=1 28 163 1.0E-46
sp|Q9UUE4|PPIL4_SCHPO Peptidyl-prolyl cis-trans isomerase cyp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cyp6 PE=1 SV=1 66 165 2.0E-46
sp|Q9CXG3|PPIL4_MOUSE Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=1 SV=2 28 163 3.0E-46
sp|Q05AT9|U1SBP_XENLA U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Xenopus laevis GN=snrnp35 PE=2 SV=1 82 159 1.0E-11
sp|Q4KMD3|U1SBP_DANRE U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Danio rerio GN=snrnp35 PE=2 SV=1 82 171 3.0E-11
sp|Q5U1W5|U1SBP_RAT U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus norvegicus GN=Snrnp35 PE=2 SV=1 82 159 6.0E-11
sp|Q9D384|U1SBP_MOUSE U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Mus musculus GN=Snrnp35 PE=2 SV=1 82 159 7.0E-11
sp|Q16560|U1SBP_HUMAN U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo sapiens GN=SNRNP35 PE=1 SV=1 82 159 3.0E-10
sp|Q1LZH0|U1SBP_BOVIN U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus GN=SNRNP35 PE=2 SV=1 82 159 5.0E-10
sp|Q54Y98|TRA2_DICDI Transformer-2 protein homolog OS=Dictyostelium discoideum GN=tra2 PE=3 SV=1 77 164 9.0E-10
sp|Q60990|RBY1B_MOUSE RNA-binding motif protein, Y chromosome, family 1 member B OS=Mus musculus GN=Rbmy1b PE=2 SV=3 77 157 2.0E-08
sp|O35698|RBY1A_MOUSE RNA-binding motif protein, Y chromosome, family 1 member A1 OS=Mus musculus GN=Rbmy1a1 PE=1 SV=2 77 157 3.0E-08
sp|Q8VY74|U1135_ARATH U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Arabidopsis thaliana GN=SNRNP35 PE=1 SV=1 82 170 2.0E-07
sp|O13829|RU17_SCHPO U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=usp101 PE=1 SV=1 82 158 5.0E-07
sp|Q55FQ0|RU17_DICDI U1 small nuclear ribonucleoprotein 70 kDa OS=Dictyostelium discoideum GN=snrnp70 PE=3 SV=1 75 158 5.0E-07
sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-b PE=1 SV=1 83 158 7.0E-07
sp|Q9XFD1|NCBP2_ARATH Nuclear cap-binding protein subunit 2 OS=Arabidopsis thaliana GN=CBP20 PE=1 SV=1 84 287 7.0E-07
sp|P0C8Z4|RMXL3_PANTR RNA-binding motif protein, X-linked-like-3 OS=Pan troglodytes GN=RBMXL3 PE=3 SV=1 78 186 1.0E-06
sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1 83 158 2.0E-06
sp|Q42404|RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 PE=1 SV=1 82 281 2.0E-06
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic and nuclear OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PAB1 PE=3 SV=2 86 161 3.0E-06
sp|Q9FMG4|SC35_ARATH Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana GN=SC35 PE=1 SV=1 86 161 7.0E-06
sp|Q13595|TRA2A_HUMAN Transformer-2 protein homolog alpha OS=Homo sapiens GN=TRA2A PE=1 SV=1 82 160 8.0E-06
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0003674 molecular_function No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003676 nucleic acid binding No
GO:0097159 organic cyclic compound binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2648
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7020 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|7235
Ophiocordyceps camponoti-floridani Ophcf2|06899
Ophiocordyceps camponoti-rufipedis Ophun1|4879
Ophiocordyceps kimflemingae Ophio5|2477
Ophiocordyceps subramaniannii Hirsu2|4062

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7020
MASLGPSEAASSGAALDKSDKSQSINEPEPQADNGMDEESSCQAKGPCQEDLDKQLRERKAAIQAVQLELMGDLP
YAEVEPPENVLFVCKLNPVTQDEDLNLIFSRFGKIQSCEIIRDAKTKDSLQYAFIEFKEKAACEAAYFKMQDVLI
DDRRIHVDFSQSVKKLSDAWRKAANKQRRANASRGGWGGVEELEKKRQYRAHMDKREGEGYDMVHGEDKARGRDQ
GVPEDAPREARSLRRRRRDSDDAGYARNRSRSPQRRERTTDRYSSSRRDGHGRRRETDLDMRSRDQQHYKRDGNQ
RGDAGRYHDRHSDSYHRSRR*
Coding >OphauG2|7020
ATGGCATCTCTTGGCCCGTCTGAGGCTGCATCTTCTGGCGCGGCTTTGGACAAGTCGGATAAGAGCCAAAGCATC
AATGAGCCTGAGCCACAGGCAGACAATGGCATGGACGAAGAATCATCATGTCAAGCCAAAGGCCCCTGCCAAGAG
GATCTTGACAAGCAACTTCGCGAGCGGAAAGCTGCAATCCAAGCCGTCCAGCTCGAGCTCATGGGCGACCTGCCT
TATGCCGAAGTCGAGCCACCAGAAAACGTTCTCTTCGTCTGCAAGCTCAACCCCGTGACGCAAGACGAAGACCTA
AATCTCATCTTTAGCCGATTTGGAAAGATTCAAAGTTGCGAGATAATACGGGATGCAAAGACAAAGGACAGTTTG
CAGTATGCTTTTATCGAGTTTAAAGAGAAAGCGGCATGCGAGGCTGCATACTTCAAGATGCAAGACGTCTTGATT
GATGATCGGCGGATCCACGTTGATTTCTCACAGAGCGTCAAGAAGCTGAGTGACGCGTGGAGAAAAGCTGCCAAC
AAGCAACGCAGAGCCAATGCTTCCAGAGGAGGTTGGGGGGGAGTTGAAGAATTGGAGAAGAAGAGGCAGTACAGG
GCGCATATGGACAAGAGGGAGGGCGAGGGGTACGATATGGTCCACGGCGAGGACAAGGCGAGAGGACGTGATCAA
GGGGTGCCAGAGGATGCGCCAAGAGAGGCCAGATCCTTGAGGAGACGCCGACGGGACTCGGACGATGCCGGATAT
GCCCGTAATCGTAGCCGAAGCCCCCAGCGACGCGAGAGGACCACGGACAGATATTCATCAAGTCGAAGAGATGGT
CATGGACGCCGCAGAGAAACAGATTTGGATATGAGGAGTCGTGACCAACAACACTACAAACGAGACGGAAACCAG
CGTGGGGATGCAGGCCGCTATCATGATAGGCACTCGGACAGCTACCACCGATCACGACGGTGA
Transcript >OphauG2|7020
ATGGCATCTCTTGGCCCGTCTGAGGCTGCATCTTCTGGCGCGGCTTTGGACAAGTCGGATAAGAGCCAAAGCATC
AATGAGCCTGAGCCACAGGCAGACAATGGCATGGACGAAGAATCATCATGTCAAGCCAAAGGCCCCTGCCAAGAG
GATCTTGACAAGCAACTTCGCGAGCGGAAAGCTGCAATCCAAGCCGTCCAGCTCGAGCTCATGGGCGACCTGCCT
TATGCCGAAGTCGAGCCACCAGAAAACGTTCTCTTCGTCTGCAAGCTCAACCCCGTGACGCAAGACGAAGACCTA
AATCTCATCTTTAGCCGATTTGGAAAGATTCAAAGTTGCGAGATAATACGGGATGCAAAGACAAAGGACAGTTTG
CAGTATGCTTTTATCGAGTTTAAAGAGAAAGCGGCATGCGAGGCTGCATACTTCAAGATGCAAGACGTCTTGATT
GATGATCGGCGGATCCACGTTGATTTCTCACAGAGCGTCAAGAAGCTGAGTGACGCGTGGAGAAAAGCTGCCAAC
AAGCAACGCAGAGCCAATGCTTCCAGAGGAGGTTGGGGGGGAGTTGAAGAATTGGAGAAGAAGAGGCAGTACAGG
GCGCATATGGACAAGAGGGAGGGCGAGGGGTACGATATGGTCCACGGCGAGGACAAGGCGAGAGGACGTGATCAA
GGGGTGCCAGAGGATGCGCCAAGAGAGGCCAGATCCTTGAGGAGACGCCGACGGGACTCGGACGATGCCGGATAT
GCCCGTAATCGTAGCCGAAGCCCCCAGCGACGCGAGAGGACCACGGACAGATATTCATCAAGTCGAAGAGATGGT
CATGGACGCCGCAGAGAAACAGATTTGGATATGAGGAGTCGTGACCAACAACACTACAAACGAGACGGAAACCAG
CGTGGGGATGCAGGCCGCTATCATGATAGGCACTCGGACAGCTACCACCGATCACGACGGTGA
Gene >OphauG2|7020
ATGGCATCTCTTGGCCCGTCTGAGGCTGCATCTTCTGGCGCGGCTTTGGACAAGTCGGATAAGAGCCAAAGCATC
AATGAGCCTGAGCCACAGGCAGACAATGGCATGGACGAAGAATCATCATGTCAAGCCAAAGGCCCCTGCCAAGAG
GATCTTGACAAGCAACTTCGCGAGCGGAAAGCTGCAATCCAAGCCGTCCAGCTCGAGCTCATGGGCGACCTGCCT
TATGCCGAAGTCGAGCCACCAGAAAACGTTCTCTTCGTCTGCAAGCTCAACCCCGTGACGCAAGACGAAGACCTA
AATCTCATCTTTAGCCGATTTGGAAAGATTCAAAGTTGCGAGATAATACGGGATGCAAAGACAAAGGACAGTTTG
CAGTATGCTTTTATCGAGTTTAAAGAGAAAGCGGCATGCGAGGCTGCATACTTCAAGATGCAAGACGTCTTGATT
GATGATCGGCGGATCCACGTTGATTTCTCACAGAGCGTCAAGAAGCTGAGTGACGCGTGGAGAAAAGCTGCCAAC
AAGCAACGCAGAGCCAATGCTTCCAGAGGAGGTTGGGGGGGAGTTGAAGAATTGGAGAAGAAGAGGCAGTACAGG
GCGCATATGGACAAGAGGGAGGGCGAGGGGTACGATATGGTCCACGGCGAGGACAAGGCGAGAGGACGTGATCAA
GGGGTGCCAGAGGATGCGCCAAGAGAGGCCAGATCCTTGAGGAGACGCCGACGGGACTCGGACGATGCCGGATAT
GCCCGTAATCGTAGCCGAAGCCCCCAGCGACGCGAGAGGACCACGGACAGATATTCATCAAGTCGAAGAGATGGT
CATGGACGCCGCAGAGAAACAGATTTGGATATGAGGAGTCGTGACCAACAACACTACAAACGAGACGGAAACCAG
CGTGGGGATGCAGGCCGCTATCATGATAGGCACTCGGACAGCTACCACCGATCACGACGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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