Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|6988
Gene name
Location	Contig_77:11494..13020
Strand	+
Gene length (bp)	1526
Transcript length (bp)	1350
Coding sequence length (bp)	1350
Protein length (aa)	450

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02582	DUF155	RMND1/Sif2-Sif3/Mrx10, DUF155	1.0E-49	224	394

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q03441\|RMD1_YEAST	Sporulation protein RMD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD1 PE=1 SV=1	70	448	1.0E-132
sp\|O74446\|SIF2_SCHPO	Sad1-interacting factor 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif2 PE=1 SV=2	78	443	1.0E-131
sp\|Q09877\|SIF3_SCHPO	Sad1-interacting factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif3 PE=1 SV=2	81	409	3.0E-48
sp\|P43620\|RMD8_YEAST	Sporulation protein RMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD8 PE=1 SV=1	223	442	3.0E-43
sp\|Q9NWS8\|RMND1_HUMAN	Required for meiotic nuclear division protein 1 homolog OS=Homo sapiens GN=RMND1 PE=1 SV=2	139	434	3.0E-26

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q03441\|RMD1_YEAST	Sporulation protein RMD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD1 PE=1 SV=1	70	448	1.0E-132
sp\|O74446\|SIF2_SCHPO	Sad1-interacting factor 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif2 PE=1 SV=2	78	443	1.0E-131
sp\|Q09877\|SIF3_SCHPO	Sad1-interacting factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif3 PE=1 SV=2	81	409	3.0E-48
sp\|P43620\|RMD8_YEAST	Sporulation protein RMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD8 PE=1 SV=1	223	442	3.0E-43
sp\|Q9NWS8\|RMND1_HUMAN	Required for meiotic nuclear division protein 1 homolog OS=Homo sapiens GN=RMND1 PE=1 SV=2	139	434	3.0E-26
sp\|Q8CI78\|RMND1_MOUSE	Required for meiotic nuclear division protein 1 homolog OS=Mus musculus GN=Rmnd1 PE=1 SV=1	93	434	1.0E-25
sp\|Q5RAR5\|RMND1_PONAB	Required for meiotic nuclear division protein 1 homolog OS=Pongo abelii GN=RMND1 PE=2 SV=1	139	434	3.0E-25
sp\|Q05648\|MRX10_YEAST	MIOREX complex component 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRX10 PE=1 SV=1	230	433	1.0E-18

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 27	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	423	445	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|6988 MDDELAPLLADARSPSSGSSNDARPRPSRTVTFSADPVTRTIEPDAALNSKLRRRNSHGAVAVAQQTPLPAGASG LAKIGPQRSTKKTEKLKLLPNPDIDQEADDQESGRDVYSQYTRIKDPTARRDAARLGKGDRFRLPRVTAYCTANR YHMDGLMRFLKSRGKTRGANPKLIDECIYTPYASKDTQPLADASNAASAAPQDDVRQAEPVSPDFDTQVHTPEVF LFDYGVVVVWGMSEGQEAKLLRDIAKFEVEKLAPDDVEVERFNFYYTQEYQARIYNDFITLRDKNNYMTKLAISH ALAQSVKTSLFEELIASTIGACKDIPTQIALTGKIDLSRSQINMQIGELFILRINIHLNGSVLDTPELFWVEPQL EPVYQAVRSYLEMDQRVGLITERLDVIADLLAVLKDQLSHGHDEKLEWIVIVLIAMEILVAAVNIVVDLYAGEA*
Coding	>OphauG2\|6988 ATGGACGACGAACTGGCGCCGCTGCTGGCCGACGCGCGCAGCCCCAGCTCCGGCAGCAGCAACGACGCCAGACCC AGACCCTCGCGCACCGTGACCTTCAGCGCAGACCCGGTGACGCGAACCATCGAGCCCGACGCCGCGCTCAACAGC AAGCTGCGGCGACGCAACAGCCACGGCGCCGTCGCGGTCGCACAGCAGACGCCGCTGCCGGCCGGGGCGTCGGGG CTGGCCAAAATCGGCCCGCAGCGAAGCACCAAGAAGACGGAAAAGCTCAAACTGCTGCCCAACCCCGACATTGAC CAAGAGGCCGACGACCAGGAGAGCGGGCGAGACGTCTACTCGCAGTACACGCGCATCAAGGACCCCACGGCTCGC CGCGATGCCGCCCGCCTTGGCAAGGGAGATCGCTTCCGGCTGCCCCGCGTCACCGCCTACTGCACTGCCAACCGC TACCACATGGACGGCCTGATGCGGTTTCTCAAGAGCCGCGGCAAGACGCGCGGCGCCAATCCCAAGCTCATTGAC GAGTGCATCTACACGCCCTATGCCTCCAAGGACACGCAGCCCCTTGCCGACGCCTCCAACGCCGCGTCTGCCGCC CCCCAAGACGACGTGCGGCAAGCCGAGCCCGTCTCCCCCGACTTTGACACCCAGGTCCACACCCCCGAAGTCTTT CTCTTTGACTATGGCGTCGTGGTCGTCTGGGGCATGTCCGAGGGCCAAGAAGCCAAGCTGTTGCGCGACATTGCA AAGTTTGAGGTGGAAAAGCTGGCTCCCGACGACGTCGAAGTCGAGCGCTTCAACTTTTACTACACCCAAGAGTAC CAGGCACGCATCTACAACGACTTCATCACCCTGCGCGACAAGAACAACTACATGACCAAACTCGCCATTTCCCAT GCTTTGGCCCAAAGCGTAAAGACTTCGCTTTTCGAAGAGCTCATCGCCTCCACCATTGGCGCCTGCAAGGACATT CCCACCCAGATTGCCCTCACCGGCAAGATTGACCTCAGCCGCTCACAAATCAACATGCAGATTGGCGAGCTCTTC ATCCTTCGCATCAACATACACCTCAACGGCTCCGTCCTCGACACCCCCGAGCTCTTTTGGGTCGAGCCTCAGCTC GAACCCGTCTACCAGGCTGTCCGCAGCTACCTCGAAATGGATCAGCGCGTCGGCCTTATAACAGAACGCCTCGAC GTCATTGCTGACTTGTTGGCTGTGCTCAAAGACCAGTTGAGCCATGGCCATGACGAGAAGCTGGAATGGATTGTC ATTGTCCTCATTGCCATGGAGATTTTGGTTGCTGCTGTCAACATTGTCGTCGATCTGTATGCTGGCGAAGCGTAA
Transcript	>OphauG2\|6988 ATGGACGACGAACTGGCGCCGCTGCTGGCCGACGCGCGCAGCCCCAGCTCCGGCAGCAGCAACGACGCCAGACCC AGACCCTCGCGCACCGTGACCTTCAGCGCAGACCCGGTGACGCGAACCATCGAGCCCGACGCCGCGCTCAACAGC AAGCTGCGGCGACGCAACAGCCACGGCGCCGTCGCGGTCGCACAGCAGACGCCGCTGCCGGCCGGGGCGTCGGGG CTGGCCAAAATCGGCCCGCAGCGAAGCACCAAGAAGACGGAAAAGCTCAAACTGCTGCCCAACCCCGACATTGAC CAAGAGGCCGACGACCAGGAGAGCGGGCGAGACGTCTACTCGCAGTACACGCGCATCAAGGACCCCACGGCTCGC CGCGATGCCGCCCGCCTTGGCAAGGGAGATCGCTTCCGGCTGCCCCGCGTCACCGCCTACTGCACTGCCAACCGC TACCACATGGACGGCCTGATGCGGTTTCTCAAGAGCCGCGGCAAGACGCGCGGCGCCAATCCCAAGCTCATTGAC GAGTGCATCTACACGCCCTATGCCTCCAAGGACACGCAGCCCCTTGCCGACGCCTCCAACGCCGCGTCTGCCGCC CCCCAAGACGACGTGCGGCAAGCCGAGCCCGTCTCCCCCGACTTTGACACCCAGGTCCACACCCCCGAAGTCTTT CTCTTTGACTATGGCGTCGTGGTCGTCTGGGGCATGTCCGAGGGCCAAGAAGCCAAGCTGTTGCGCGACATTGCA AAGTTTGAGGTGGAAAAGCTGGCTCCCGACGACGTCGAAGTCGAGCGCTTCAACTTTTACTACACCCAAGAGTAC CAGGCACGCATCTACAACGACTTCATCACCCTGCGCGACAAGAACAACTACATGACCAAACTCGCCATTTCCCAT GCTTTGGCCCAAAGCGTAAAGACTTCGCTTTTCGAAGAGCTCATCGCCTCCACCATTGGCGCCTGCAAGGACATT CCCACCCAGATTGCCCTCACCGGCAAGATTGACCTCAGCCGCTCACAAATCAACATGCAGATTGGCGAGCTCTTC ATCCTTCGCATCAACATACACCTCAACGGCTCCGTCCTCGACACCCCCGAGCTCTTTTGGGTCGAGCCTCAGCTC GAACCCGTCTACCAGGCTGTCCGCAGCTACCTCGAAATGGATCAGCGCGTCGGCCTTATAACAGAACGCCTCGAC GTCATTGCTGACTTGTTGGCTGTGCTCAAAGACCAGTTGAGCCATGGCCATGACGAGAAGCTGGAATGGATTGTC ATTGTCCTCATTGCCATGGAGATTTTGGTTGCTGCTGTCAACATTGTCGTCGATCTGTATGCTGGCGAAGCGTAA
Gene	>OphauG2\|6988 ATGGACGACGAACTGGCGCCGCTGCTGGCCGACGCGCGCAGCCCCAGCTCCGGCAGCAGCAACGACGCCAGACCC AGACCCTCGCGCACCGTGACCTTCAGCGCAGACCCGGTGACGCGAACCATCGAGCCCGACGCCGCGCTCAACAGC AAGCTGCGGCGACGCAACAGCCACGGCGCCGTCGCGGTCGCACAGCAGACGCCGCTGCCGGCCGGGGCGTCGGGG CTGGCCAAAATCGGCCCGCAGCGAAGCACCAAGAAGACGGAAAAGCTCAAACTGCTGCCCAACCCCGACATTGAC CAAGAGGCCGACGACCAGGAGAGCGGGCGAGACGTCTACTCGCAGTACACGCGCATCAAGGACCCCACGGCTCGC CGCGATGCCGCCCGCCTTGGCAAGGGAGATCGCTTCCGGCTGCCCCGCGTCACCGCCTACTGCACTGCCAACCGC TACCACATGGACGGCCTGATGCGGTTTCTCAAGAGCCGCGGCAAGACGCGCGGCGCCAATCCCAAGCTCATTGAC GAGTGCATCTACACGCCCTATGCCTCCAAGGACACGCAGCCCCTTGCCGACGCCTCCAACGCCGCGTCTGCCGCC CCCCAAGACGACGTGCGGCAAGCCGAGCCCGTCTCCCCCGACTTTGACACCCAGGTCCACACCCCCGAAGTCTTT CTCTTTGACTATGGCGTCGTGGTCGTCTGGGGCATGTCCGAGGGCCAAGAAGCCAAGCTGTTGCGCGACATTGCA AAGTTTGAGGTGGAAAAGCTGGCTCCCGACGACGTCGAAGTCGAGCGCTTCAACTTTTACTACACCCAAGAGTAC CAGGCACGCATCTACAACGACTTCATCACCCTGCGCGACAAGAACAACTACATGACCAAACTCGCCATTTCCCAT GCTTTGGCCCAAAGCGTAAAGGTACCCTCACCCTGCCCGACACACTGCCCGTCACCCTGCCCGTCACCCTGCCCG TCACACTGCCCGTGATGCCTCGCTCTACTGCTGACTCGCACCAAATCCTCCACAGACTTCGCTTTTCGAAGAGCT CATCGCCTCCACCATTGGCGCCTGCAAGGACATTCCCACCCAGATTGCCCTCACCGGCAAGATTGACCTCAGCCG CTCACAAATCAACATGCAGATTGGCGAGCTCTTCATCCTTCGCATCAACATACACCTCAACGGCTCCGTCCTCGA CACCCCCGAGCTCTTTTGGGTCGAGCCTCAGCTCGAACCCGTCTACCAGGCTGTCCGCAGCTACCTCGAAATGGA TCAGCGCGTCGGCCTTATAACAGAACGCCTCGACGTCATTGCTGACTTGTTGGCTGTGCTCAAAGACCAGTTGAG CCATGGCCATGACGAGAAGCTGGAATGGATTGGTGGGCTCCATCCTCTCCTTCCTTTTGCAAGGCTTGTACAAGT GGCTGACCATTGTCCCGATAACAGTCATTGTCCTCATTGCCATGGAGATTTTGGTTGCTGCTGTCAACATTGTCG TCGATCTGTATGCTGGCGAAGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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