Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|6959
Gene name
Location	Contig_762:7701..8780
Strand	+
Gene length (bp)	1079
Transcript length (bp)	903
Coding sequence length (bp)	903
Protein length (aa)	301

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q08280\|BSC6_YEAST	Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1	28	290	2.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 28	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	13	35	22
2	45	67	22
3	74	96	22
4	135	157	22
5	178	200	22
6	210	232	22
7	245	267	22
8	273	295	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|6959 MLQMASNPPFLGVVVSILIADFSGSIGEAAWNAYLGGMSNSNHLLGFLHGFYGTGALLSHLVASFMITKGGLPWN HFYYFMASIEVLSSVSGFWWSTGVAYRASVNQHQDEHGTRNKVTMTKVLVTPPFSRVTWLCSFFLLGYVAIEVAI GGWILVFMTEVRKATQFAARMTATGFWLGITLGRFLLCFIYLLLVIALGIVSWLVPQFLVSAIAFGLQGFLLGPL FPAGIVVMSRLLPRHLHVSAIGFAAAFGSIGSAVLPFAVGAIAQVKGVPVLQPIVLAILVVILCLWLGLLRCDRK *
Coding	>OphauG2\|6959 ATGCTCCAGATGGCTTCCAATCCTCCTTTTCTCGGCGTCGTCGTTTCCATCTTGATTGCAGACTTTTCAGGCAGC ATTGGCGAAGCGGCATGGAATGCTTATCTTGGGGGCATGTCCAACTCCAACCATCTCTTAGGCTTCCTGCACGGC TTCTATGGCACGGGAGCTCTTCTATCACACCTCGTTGCATCCTTTATGATTACAAAGGGCGGATTACCATGGAAT CACTTTTATTACTTCATGGCAAGCATCGAGGTTCTAAGCTCAGTCTCTGGCTTCTGGTGGTCAACCGGCGTCGCA TACAGAGCTTCGGTAAATCAGCACCAAGACGAACACGGGACCAGAAACAAGGTCACCATGACCAAAGTCCTCGTC ACACCTCCATTCTCTCGAGTCACCTGGCTCTGCTCCTTTTTCCTGCTCGGCTACGTCGCCATCGAGGTTGCCATT GGAGGATGGATCTTGGTCTTCATGACCGAGGTTCGCAAGGCTACTCAATTTGCTGCTCGCATGACAGCCACGGGC TTCTGGCTAGGCATTACGCTGGGCCGGTTTTTGCTTTGCTTCATCTATCTCTTGCTCGTCATCGCACTCGGGATT GTGTCCTGGCTCGTGCCTCAGTTCCTCGTATCGGCAATTGCTTTTGGGCTGCAAGGCTTCCTCCTCGGCCCTCTC TTCCCGGCTGGCATTGTGGTCATGTCGAGGCTGCTCCCGCGCCATCTTCACGTCAGTGCTATAGGATTCGCCGCC GCGTTTGGCTCGATAGGATCGGCGGTATTGCCCTTTGCAGTCGGTGCAATTGCGCAAGTAAAGGGCGTCCCGGTG CTGCAGCCAATTGTCCTGGCCATATTGGTTGTCATTCTGTGCCTCTGGCTTGGGCTGCTTAGATGTGACAGGAAA TAA
Transcript	>OphauG2\|6959 ATGCTCCAGATGGCTTCCAATCCTCCTTTTCTCGGCGTCGTCGTTTCCATCTTGATTGCAGACTTTTCAGGCAGC ATTGGCGAAGCGGCATGGAATGCTTATCTTGGGGGCATGTCCAACTCCAACCATCTCTTAGGCTTCCTGCACGGC TTCTATGGCACGGGAGCTCTTCTATCACACCTCGTTGCATCCTTTATGATTACAAAGGGCGGATTACCATGGAAT CACTTTTATTACTTCATGGCAAGCATCGAGGTTCTAAGCTCAGTCTCTGGCTTCTGGTGGTCAACCGGCGTCGCA TACAGAGCTTCGGTAAATCAGCACCAAGACGAACACGGGACCAGAAACAAGGTCACCATGACCAAAGTCCTCGTC ACACCTCCATTCTCTCGAGTCACCTGGCTCTGCTCCTTTTTCCTGCTCGGCTACGTCGCCATCGAGGTTGCCATT GGAGGATGGATCTTGGTCTTCATGACCGAGGTTCGCAAGGCTACTCAATTTGCTGCTCGCATGACAGCCACGGGC TTCTGGCTAGGCATTACGCTGGGCCGGTTTTTGCTTTGCTTCATCTATCTCTTGCTCGTCATCGCACTCGGGATT GTGTCCTGGCTCGTGCCTCAGTTCCTCGTATCGGCAATTGCTTTTGGGCTGCAAGGCTTCCTCCTCGGCCCTCTC TTCCCGGCTGGCATTGTGGTCATGTCGAGGCTGCTCCCGCGCCATCTTCACGTCAGTGCTATAGGATTCGCCGCC GCGTTTGGCTCGATAGGATCGGCGGTATTGCCCTTTGCAGTCGGTGCAATTGCGCAAGTAAAGGGCGTCCCGGTG CTGCAGCCAATTGTCCTGGCCATATTGGTTGTCATTCTGTGCCTCTGGCTTGGGCTGCTTAGATGTGACAGGAAA TAA
Gene	>OphauG2\|6959 ATGCTCCAGATGGCTTCCAATCCTCCTTTTCTCGGCGTCGTCGTTTCCATCTTGATTGCAGACTTTTCAGGCAGC ATTGGCGAAGCGGCATGGAATGCTTATCTTGGGGGCATGTCCAACTCCAACCATCTCTTAGGCTTCCTGCACGGC TTCTATGGCACGGGAGCTCTTCTATCACACCTCGTTGCATCCTTTATGATTACAAAGGGCGGATTACCATGGAAT CACTTTTATTACTTCATGGCAAGTCACACACACCAGCCCAAAAAAAAAAAAAAAAATCGTTGCACCATGATTAAT TCGTGCCACTGTAGATTGGTTTATCAGGCATCGAGGTTCTAAGCTCAGTCTCTGGCTTCTGGTGGTCAACCGGCG TCGCATACAGAGCTTCGGTAAATCAGCACCAAGACGAACACGGGACCAGAAACAAGGTCACCATGACCAAAGTCC TCGTCACACCTCCATTCTCTCGAGTCACCTGGCTCTGCTCCTTTTTCCTGCTCGGCTACGTCGCCATCGAGGTTG CCATTGGAGGATGGATCTTGGTCTTCATGACCGAGGTTCGCAAGGCTACTCAATTTGCTGCTCGCATGACAGCCA CGGGCTTCTGGCTAGGCATTACGCTGGGCCGGTTTTTGCTTTGCTTCGTCACCCCCATTATTGGCCAAAGACTGG CGATATCTGCAAGTGGTTTCTTTTTTTTTTTTTTTTTTTTGCTCCCAGCTAACCCCCAGCTTTGTAAGATCTATC TCTTGCTCGTCATCGCACTCGGGATTGTGTCCTGGCTCGTGCCTCAGTTCCTCGTATCGGCAATTGCTTTTGGGC TGCAAGGCTTCCTCCTCGGCCCTCTCTTCCCGGCTGGCATTGTGGTCATGTCGAGGCTGCTCCCGCGCCATCTTC ACGTCAGTGCTATAGGATTCGCCGCCGCGTTTGGCTCGATAGGATCGGCGGTATTGCCCTTTGCAGTCGGTGCAA TTGCGCAAGTAAAGGGCGTCCCGGTGCTGCAGCCAATTGTCCTGGCCATATTGGTTGTCATTCTGTGCCTCTGGC TTGGGCTGCTTAGATGTGACAGGAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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