Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6858
Gene name
LocationContig_742:8542..9331
Strand-
Gene length (bp)789
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 5.7E-02 220 240

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6858
MRFVPLLSALFLPCFAAAIAVLPQDSSPKELDAINAEPVCVWWHKYTTYLSIGAILTEYNITLEQFMKWNPSYRP
SAKTLTIDKHYCVQVKSSSPYPKCEHFYVVQHGDTCSNMDFHSRLEFSHAEFSKLIPGAAIKYNAPSLESSYYVP
GSDGPESDGPDSNGPDSNGPESNEPDSDATDSNGPDSDAPDSDASSQLGKRTEPPSPLADGVISTCTRYHQVRPG
QTCTSISNAHQINMIDL*
Coding >OphauG2|6858
ATGCGTTTCGTCCCTCTTCTCTCCGCGCTCTTCTTACCCTGCTTTGCCGCAGCCATTGCCGTCCTGCCTCAGGAC
TCCTCCCCCAAGGAGCTCGACGCAATCAACGCCGAGCCTGTTTGCGTCTGGTGGCACAAATACACCACTTACCTC
TCTATCGGTGCCATCCTCACCGAATACAATATCACGCTTGAGCAGTTTATGAAATGGAACCCTTCTTATCGCCCC
AGTGCCAAAACCCTCACCATTGACAAGCATTACTGCGTACAGGTCAAAAGTAGCTCTCCGTATCCCAAATGCGAA
CACTTTTACGTCGTTCAGCATGGGGATACTTGCTCCAACATGGATTTTCACTCCCGGCTTGAATTCTCGCACGCC
GAGTTTTCCAAGTTGATCCCGGGTGCTGCAATCAAGTATAACGCGCCGAGCTTAGAATCGAGTTACTATGTGCCA
GGCTCTGATGGGCCAGAATCTGATGGGCCAGACTCTAATGGGCCAGACTCTAATGGGCCAGAATCCAATGAGCCA
GACTCTGATGCGACAGACTCTAATGGGCCAGACTCTGATGCGCCAGACTCGGACGCCTCAAGCCAGCTTGGAAAG
CGCACCGAGCCGCCGTCGCCCCTGGCAGATGGTGTCATCAGCACTTGCACGCGCTATCACCAGGTTCGACCCGGC
CAGACCTGCACATCGATTTCCAACGCTCATCAAATAAACATGATTGATTTGTGA
Transcript >OphauG2|6858
ATGCGTTTCGTCCCTCTTCTCTCCGCGCTCTTCTTACCCTGCTTTGCCGCAGCCATTGCCGTCCTGCCTCAGGAC
TCCTCCCCCAAGGAGCTCGACGCAATCAACGCCGAGCCTGTTTGCGTCTGGTGGCACAAATACACCACTTACCTC
TCTATCGGTGCCATCCTCACCGAATACAATATCACGCTTGAGCAGTTTATGAAATGGAACCCTTCTTATCGCCCC
AGTGCCAAAACCCTCACCATTGACAAGCATTACTGCGTACAGGTCAAAAGTAGCTCTCCGTATCCCAAATGCGAA
CACTTTTACGTCGTTCAGCATGGGGATACTTGCTCCAACATGGATTTTCACTCCCGGCTTGAATTCTCGCACGCC
GAGTTTTCCAAGTTGATCCCGGGTGCTGCAATCAAGTATAACGCGCCGAGCTTAGAATCGAGTTACTATGTGCCA
GGCTCTGATGGGCCAGAATCTGATGGGCCAGACTCTAATGGGCCAGACTCTAATGGGCCAGAATCCAATGAGCCA
GACTCTGATGCGACAGACTCTAATGGGCCAGACTCTGATGCGCCAGACTCGGACGCCTCAAGCCAGCTTGGAAAG
CGCACCGAGCCGCCGTCGCCCCTGGCAGATGGTGTCATCAGCACTTGCACGCGCTATCACCAGGTTCGACCCGGC
CAGACCTGCACATCGATTTCCAACGCTCATCAAATAAACATGATTGATTTGTGA
Gene >OphauG2|6858
ATGCGTTTCGTCCCTCTTCTCTCCGCGCTCTTCTTACCCTGCTTTGCCGCAGCCATTGCCGTCCTGCCTCAGGAC
TCCTCCCCCAAGGAGCTCGACGCAATCAACGCCGAGCCTGTTTGCGTCTGGTGGCACAAATACACCACTTACCTC
TCTATCGGTGCCATCCTCACCGAATACAATATCACGCTTGAGCAGTTTATGAAATGGGTTTGCTCATTCTCCTCC
CTCTAACCATGCCGCTTTTTGTTCCAACTCTAATTCTCACAGAACCCTTCTTATCGCCCCAGTGCCAAAACCCTC
ACCATTGACAAGCATTACTGCGTACAGGTCAAAAGTAGCTCTCCGTATCCCAAATGCGAACACTTTTACGTCGTT
CAGCATGGGGATACTTGCTCCAACATGGATTTTCACTCCCGGCTTGAATTCTCGCACGCCGAGTTTTCCAAGTTG
ATCCCGGGTGCTGCAATCAAGTATAACGCGCCGAGCTTAGAATCGAGTTACTATGTGCCAGGCTCTGATGGGCCA
GAATCTGATGGGCCAGACTCTAATGGGCCAGACTCTAATGGGCCAGAATCCAATGAGCCAGACTCTGATGCGACA
GACTCTAATGGGCCAGACTCTGATGCGCCAGACTCGGACGCCTCAAGCCAGCTTGGAAAGCGCACCGAGCCGCCG
TCGCCCCTGGCAGATGGTGTCATCAGCACTTGCACGCGCTATCACCAGGTTCGACCCGGCCAGACCTGCACATCG
ATTTCCAACGCTCATCAAATAAACATGATTGATTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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