Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6848
Gene name
LocationContig_74:32007..32680
Strand-
Gene length (bp)673
Transcript length (bp)612
Coding sequence length (bp)612
Protein length (aa) 204

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04892 VanZ VanZ like family 1.8E-07 33 110

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13689|YDYA_SCHPO Uncharacterized protein C11E3.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11E3.10 PE=4 SV=2 3 138 3.0E-27

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 36 53 17
3 65 84 19
4 94 111 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6848
MRIRLPFAGVFLLLLLAAAYAGLTTLQLGQYVNDKVLHLVTFFLLTIVFYWIVDTNRRRTQNMTFVICTIVLGVG
SEFLQSFLPNDRDFDLYDIVANIVGSLAGLGLCSLYHKRMLERRRQRKTYNAVPGENDADIELGEEHETGVTDGP
SHPRSLEAEVDNWDENAADDWDENDNEQAPPLPGAKGPEHDNLDANEKKRRSD*
Coding >OphauG2|6848
ATGCGCATTCGCTTACCCTTTGCTGGCGTCTTCTTGCTCCTGCTCCTGGCCGCCGCTTACGCTGGTCTAACAACC
CTTCAACTTGGCCAATATGTCAACGACAAGGTCCTGCACCTCGTCACATTTTTTCTCCTTACGATTGTCTTCTAC
TGGATCGTCGATACCAATCGTCGCCGTACCCAAAACATGACATTTGTCATCTGCACTATAGTACTAGGCGTCGGC
TCCGAGTTCCTTCAAAGTTTCCTCCCCAACGACCGCGACTTTGATCTATATGATATTGTGGCCAATATAGTGGGC
AGCCTTGCGGGTCTGGGATTATGTTCCTTGTACCATAAGCGCATGCTGGAGCGAAGGAGACAGCGCAAGACTTAC
AACGCGGTTCCTGGCGAGAACGATGCAGACATCGAGCTCGGAGAAGAACATGAAACTGGAGTCACAGATGGTCCA
TCACATCCGCGGTCTCTGGAAGCCGAGGTTGACAACTGGGATGAGAACGCAGCAGATGACTGGGATGAGAATGAC
AATGAACAAGCACCGCCTCTTCCAGGCGCCAAGGGCCCGGAACATGACAATCTGGACGCAAATGAGAAGAAGAGA
AGGTCAGATTGA
Transcript >OphauG2|6848
ATGCGCATTCGCTTACCCTTTGCTGGCGTCTTCTTGCTCCTGCTCCTGGCCGCCGCTTACGCTGGTCTAACAACC
CTTCAACTTGGCCAATATGTCAACGACAAGGTCCTGCACCTCGTCACATTTTTTCTCCTTACGATTGTCTTCTAC
TGGATCGTCGATACCAATCGTCGCCGTACCCAAAACATGACATTTGTCATCTGCACTATAGTACTAGGCGTCGGC
TCCGAGTTCCTTCAAAGTTTCCTCCCCAACGACCGCGACTTTGATCTATATGATATTGTGGCCAATATAGTGGGC
AGCCTTGCGGGTCTGGGATTATGTTCCTTGTACCATAAGCGCATGCTGGAGCGAAGGAGACAGCGCAAGACTTAC
AACGCGGTTCCTGGCGAGAACGATGCAGACATCGAGCTCGGAGAAGAACATGAAACTGGAGTCACAGATGGTCCA
TCACATCCGCGGTCTCTGGAAGCCGAGGTTGACAACTGGGATGAGAACGCAGCAGATGACTGGGATGAGAATGAC
AATGAACAAGCACCGCCTCTTCCAGGCGCCAAGGGCCCGGAACATGACAATCTGGACGCAAATGAGAAGAAGAGA
AGGTCAGATTGA
Gene >OphauG2|6848
ATGCGCATTCGCTTACCCTTTGCTGGTACAGACCATTGCCATTTCGACTCGTCTTGTTCAACGTGCATGTGTTGA
TGCGGCTCTAGGCGTCTTCTTGCTCCTGCTCCTGGCCGCCGCTTACGCTGGTCTAACAACCCTTCAACTTGGCCA
ATATGTCAACGACAAGGTCCTGCACCTCGTCACATTTTTTCTCCTTACGATTGTCTTCTACTGGATCGTCGATAC
CAATCGTCGCCGTACCCAAAACATGACATTTGTCATCTGCACTATAGTACTAGGCGTCGGCTCCGAGTTCCTTCA
AAGTTTCCTCCCCAACGACCGCGACTTTGATCTATATGATATTGTGGCCAATATAGTGGGCAGCCTTGCGGGTCT
GGGATTATGTTCCTTGTACCATAAGCGCATGCTGGAGCGAAGGAGACAGCGCAAGACTTACAACGCGGTTCCTGG
CGAGAACGATGCAGACATCGAGCTCGGAGAAGAACATGAAACTGGAGTCACAGATGGTCCATCACATCCGCGGTC
TCTGGAAGCCGAGGTTGACAACTGGGATGAGAACGCAGCAGATGACTGGGATGAGAATGACAATGAACAAGCACC
GCCTCTTCCAGGCGCCAAGGGCCCGGAACATGACAATCTGGACGCAAATGAGAAGAAGAGAAGGTCAGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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