© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6848 |
| Gene name | |
| Location | Contig_74:32007..32680 |
| Strand | - |
| Gene length (bp) | 673 |
| Transcript length (bp) | 612 |
| Coding sequence length (bp) | 612 |
| Protein length (aa) | 204 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04892 | VanZ | VanZ like family | 1.8E-07 | 33 | 110 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13689|YDYA_SCHPO | Uncharacterized protein C11E3.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11E3.10 PE=4 SV=2 | 3 | 138 | 3.0E-27 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| 2 | 36 | 53 | 17 |
| 3 | 65 | 84 | 19 |
| 4 | 94 | 111 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6848 MRIRLPFAGVFLLLLLAAAYAGLTTLQLGQYVNDKVLHLVTFFLLTIVFYWIVDTNRRRTQNMTFVICTIVLGVG SEFLQSFLPNDRDFDLYDIVANIVGSLAGLGLCSLYHKRMLERRRQRKTYNAVPGENDADIELGEEHETGVTDGP SHPRSLEAEVDNWDENAADDWDENDNEQAPPLPGAKGPEHDNLDANEKKRRSD* |
| Coding | >OphauG2|6848 ATGCGCATTCGCTTACCCTTTGCTGGCGTCTTCTTGCTCCTGCTCCTGGCCGCCGCTTACGCTGGTCTAACAACC CTTCAACTTGGCCAATATGTCAACGACAAGGTCCTGCACCTCGTCACATTTTTTCTCCTTACGATTGTCTTCTAC TGGATCGTCGATACCAATCGTCGCCGTACCCAAAACATGACATTTGTCATCTGCACTATAGTACTAGGCGTCGGC TCCGAGTTCCTTCAAAGTTTCCTCCCCAACGACCGCGACTTTGATCTATATGATATTGTGGCCAATATAGTGGGC AGCCTTGCGGGTCTGGGATTATGTTCCTTGTACCATAAGCGCATGCTGGAGCGAAGGAGACAGCGCAAGACTTAC AACGCGGTTCCTGGCGAGAACGATGCAGACATCGAGCTCGGAGAAGAACATGAAACTGGAGTCACAGATGGTCCA TCACATCCGCGGTCTCTGGAAGCCGAGGTTGACAACTGGGATGAGAACGCAGCAGATGACTGGGATGAGAATGAC AATGAACAAGCACCGCCTCTTCCAGGCGCCAAGGGCCCGGAACATGACAATCTGGACGCAAATGAGAAGAAGAGA AGGTCAGATTGA |
| Transcript | >OphauG2|6848 ATGCGCATTCGCTTACCCTTTGCTGGCGTCTTCTTGCTCCTGCTCCTGGCCGCCGCTTACGCTGGTCTAACAACC CTTCAACTTGGCCAATATGTCAACGACAAGGTCCTGCACCTCGTCACATTTTTTCTCCTTACGATTGTCTTCTAC TGGATCGTCGATACCAATCGTCGCCGTACCCAAAACATGACATTTGTCATCTGCACTATAGTACTAGGCGTCGGC TCCGAGTTCCTTCAAAGTTTCCTCCCCAACGACCGCGACTTTGATCTATATGATATTGTGGCCAATATAGTGGGC AGCCTTGCGGGTCTGGGATTATGTTCCTTGTACCATAAGCGCATGCTGGAGCGAAGGAGACAGCGCAAGACTTAC AACGCGGTTCCTGGCGAGAACGATGCAGACATCGAGCTCGGAGAAGAACATGAAACTGGAGTCACAGATGGTCCA TCACATCCGCGGTCTCTGGAAGCCGAGGTTGACAACTGGGATGAGAACGCAGCAGATGACTGGGATGAGAATGAC AATGAACAAGCACCGCCTCTTCCAGGCGCCAAGGGCCCGGAACATGACAATCTGGACGCAAATGAGAAGAAGAGA AGGTCAGATTGA |
| Gene | >OphauG2|6848 ATGCGCATTCGCTTACCCTTTGCTGGTACAGACCATTGCCATTTCGACTCGTCTTGTTCAACGTGCATGTGTTGA TGCGGCTCTAGGCGTCTTCTTGCTCCTGCTCCTGGCCGCCGCTTACGCTGGTCTAACAACCCTTCAACTTGGCCA ATATGTCAACGACAAGGTCCTGCACCTCGTCACATTTTTTCTCCTTACGATTGTCTTCTACTGGATCGTCGATAC CAATCGTCGCCGTACCCAAAACATGACATTTGTCATCTGCACTATAGTACTAGGCGTCGGCTCCGAGTTCCTTCA AAGTTTCCTCCCCAACGACCGCGACTTTGATCTATATGATATTGTGGCCAATATAGTGGGCAGCCTTGCGGGTCT GGGATTATGTTCCTTGTACCATAAGCGCATGCTGGAGCGAAGGAGACAGCGCAAGACTTACAACGCGGTTCCTGG CGAGAACGATGCAGACATCGAGCTCGGAGAAGAACATGAAACTGGAGTCACAGATGGTCCATCACATCCGCGGTC TCTGGAAGCCGAGGTTGACAACTGGGATGAGAACGCAGCAGATGACTGGGATGAGAATGACAATGAACAAGCACC GCCTCTTCCAGGCGCCAAGGGCCCGGAACATGACAATCTGGACGCAAATGAGAAGAAGAGAAGGTCAGATTGA |