© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6840 |
| Gene name | |
| Location | Contig_74:11696..12386 |
| Strand | - |
| Gene length (bp) | 690 |
| Transcript length (bp) | 498 |
| Coding sequence length (bp) | 498 |
| Protein length (aa) | 166 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00690 | Cation_ATPase_N | Cation transporter/ATPase, N-terminus | 9.0E-12 | 99 | 161 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P13607|ATNA_DROME | Sodium/potassium-transporting ATPase subunit alpha OS=Drosophila melanogaster GN=Atpalpha PE=1 SV=3 | 80 | 162 | 9.0E-08 |
| sp|Q6RWA9|AT1A_TAESO | Sodium/potassium-transporting ATPase subunit alpha OS=Taenia solium PE=2 SV=1 | 92 | 162 | 3.0E-07 |
| sp|P17326|AT1A_ARTSF | Sodium/potassium-transporting ATPase subunit alpha-A OS=Artemia franciscana PE=2 SV=1 | 91 | 162 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 144 | 163 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6840 MASEKMAEAQVAERVRWGDEEQGRARTRSRSRTALSRSSSADSLAIRSIQSRGPVDPAVTLPIQYRTVSFQIEES KGKERVELARAVDSTAKDLSDLEWHTISPEDVAQRLVTAPGSGLSEEQAKRRLVEYGRNAPSPPKTNRFWTIVGY FFKGFGGILLLWPTW* |
| Coding | >OphauG2|6840 ATGGCGTCAGAAAAGATGGCGGAAGCCCAGGTGGCGGAACGCGTCCGCTGGGGCGACGAGGAGCAGGGACGAGCT CGAACAAGATCACGGTCGCGCACAGCCCTCAGTCGCAGCAGCTCGGCAGACTCACTGGCCATTCGCAGCATCCAA TCGCGAGGACCAGTCGATCCAGCCGTCACGCTACCCATCCAATACCGCACCGTCTCCTTCCAGATTGAAGAATCC AAAGGCAAGGAACGCGTTGAATTGGCTCGGGCTGTTGATTCTACAGCCAAGGATCTCAGCGACCTCGAGTGGCAC ACCATTTCTCCTGAAGATGTGGCCCAGAGGCTGGTGACGGCTCCTGGCAGTGGTCTGTCGGAAGAGCAGGCCAAA AGGAGGCTGGTTGAATATGGCAGAAATGCCCCTTCGCCGCCAAAGACGAATCGCTTCTGGACCATTGTGGGCTAT TTTTTCAAAGGCTTTGGCGGCATTCTCTTGCTCTGGCCAACCTGGTGA |
| Transcript | >OphauG2|6840 ATGGCGTCAGAAAAGATGGCGGAAGCCCAGGTGGCGGAACGCGTCCGCTGGGGCGACGAGGAGCAGGGACGAGCT CGAACAAGATCACGGTCGCGCACAGCCCTCAGTCGCAGCAGCTCGGCAGACTCACTGGCCATTCGCAGCATCCAA TCGCGAGGACCAGTCGATCCAGCCGTCACGCTACCCATCCAATACCGCACCGTCTCCTTCCAGATTGAAGAATCC AAAGGCAAGGAACGCGTTGAATTGGCTCGGGCTGTTGATTCTACAGCCAAGGATCTCAGCGACCTCGAGTGGCAC ACCATTTCTCCTGAAGATGTGGCCCAGAGGCTGGTGACGGCTCCTGGCAGTGGTCTGTCGGAAGAGCAGGCCAAA AGGAGGCTGGTTGAATATGGCAGAAATGCCCCTTCGCCGCCAAAGACGAATCGCTTCTGGACCATTGTGGGCTAT TTTTTCAAAGGCTTTGGCGGCATTCTCTTGCTCTGGCCAACCTGGTGA |
| Gene | >OphauG2|6840 ATGGCGTCAGAAAAGATGGCGGAAGCCCAGGTGGCGGAACGCGTCCGCTGGGGCGACGAGGAGCAGGGACGAGCT CGAACAAGATCACGGTCGCGCACAGCCCTCAGTCGCAGCAGCTCGGCAGACTCACTGGCCATTCGCAGCATCCAA TCGCGAGGACCAGTCGATCCAGCCGTCACGCTACCCATCCAATACCGCACCGTGTAAGTTGAGACGAAAAAAAAG AAGAATAATAAAGCAAGACGAGAGACTGACAGAGGCCAATGCAGCTCCTTCCAGATTGAAGAATCCAAAGGCAAG GAACGCGTTGAATTGGCTCGGGCTGTTGATTCTACAGCCAAGGGTAAGCTCTCCATGCAGCAGTTCAGCACACAT GCAAACCTCGGCGCCTAATGTGCCAGTGGCAAAATACAGATCTCAGCGACCTCGAGTGGCACACCATTTCTCCTG AAGATGTGGCCCAGAGGCTGGTGACGGCTCCTGGCAGTGGTCTGTCGGAAGAGCAGGCCAAAAGGAGGCTGGTTG AATATGGCAGAAATGCCCCTTCGCCGCCAAAGACGAATCGCTTCTGGACCATTGTGGGCTATTTTTTCAAAGGCT TTGGCGGCATTCTCTTGGTTGGCAGTATCTTGGTTTTTGTTTCGTGGAAACCTCTGGGAGAGCCTCAACCAGCTC TGGCCAACCTGGTGA |