© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6821 |
| Gene name | |
| Location | Contig_736:4473..5426 |
| Strand | - |
| Gene length (bp) | 953 |
| Transcript length (bp) | 846 |
| Coding sequence length (bp) | 846 |
| Protein length (aa) | 282 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00923 | TAL_FSA | Transaldolase/Fructose-6-phosphate aldolase | 2.2E-08 | 4 | 182 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q48KH5|TAL_PSE14 | Transaldolase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=tal PE=3 SV=1 | 3 | 182 | 3.0E-07 |
| sp|Q2RUN7|TAL_RHORT | Transaldolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=tal PE=3 SV=1 | 1 | 213 | 4.0E-07 |
| sp|A1WIS6|TAL_VEREI | Transaldolase OS=Verminephrobacter eiseniae (strain EF01-2) GN=tal PE=3 SV=1 | 4 | 206 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6821 MARLVSGRLHVQTLPRHTYSVKQTLKSAERLVGLFRLLAPDIKPSRLCINVIASWHGLKVCEVMHNDTTARFQGI ATRAVATYSTAQILSALYRKCSYIKFLMRPFGASQDVASSPSWSSGPTLASLDRHRIAMIYLAQAHAYKTNTTRV TAASISSSWDATDLAGIDHVGLTKDHLSRLVQSFDYLPGLECQSASLPRVLYGQSSSSSLLQREQDRIDPLRDEE DYALWLPRHFASNHGSDAIDFQRALTFFCRAQNDLEQIIISLQDVNYDDDDVASWC* |
| Coding | >OphauG2|6821 ATGGCTCGTCTTGTCAGCGGCCGGCTTCACGTGCAGACGCTGCCCAGGCATACTTATTCGGTCAAACAAACGCTC AAGAGCGCCGAGAGACTCGTCGGCCTCTTTCGACTGCTGGCACCAGACATTAAGCCCTCGAGGCTCTGCATCAAC GTCATTGCCTCTTGGCACGGGCTCAAGGTGTGCGAAGTGATGCACAATGACACTACAGCCCGCTTTCAAGGCATT GCTACGCGCGCAGTAGCCACGTACAGCACGGCCCAGATCCTCTCGGCCCTCTACCGCAAATGCAGCTACATCAAG TTTTTGATGCGCCCGTTTGGAGCCAGCCAAGACGTTGCATCATCACCGTCATGGTCATCAGGGCCCACACTCGCC TCGCTTGACCGGCATCGCATCGCCATGATTTACCTGGCCCAAGCCCACGCCTACAAAACCAACACGACGCGCGTC ACAGCCGCATCCATCTCGTCGTCGTGGGACGCCACGGATCTGGCGGGCATTGACCACGTCGGGCTGACAAAGGAC CACTTGAGCCGCCTGGTGCAGAGCTTTGACTATCTTCCAGGACTCGAGTGCCAGTCTGCGTCACTGCCTCGAGTC CTTTACGGCCAGTCGTCGTCGTCGTCGCTGCTGCAGAGGGAGCAGGATCGTATCGATCCTCTGCGAGACGAGGAA GACTATGCGTTGTGGCTGCCGAGGCATTTCGCTAGCAACCATGGCTCTGACGCCATTGATTTCCAACGCGCTTTG ACTTTTTTCTGCAGGGCGCAGAATGATTTGGAGCAAATCATTATTTCCCTCCAAGACGTCAATTACGATGATGAT GATGTTGCTTCTTGGTGCTGA |
| Transcript | >OphauG2|6821 ATGGCTCGTCTTGTCAGCGGCCGGCTTCACGTGCAGACGCTGCCCAGGCATACTTATTCGGTCAAACAAACGCTC AAGAGCGCCGAGAGACTCGTCGGCCTCTTTCGACTGCTGGCACCAGACATTAAGCCCTCGAGGCTCTGCATCAAC GTCATTGCCTCTTGGCACGGGCTCAAGGTGTGCGAAGTGATGCACAATGACACTACAGCCCGCTTTCAAGGCATT GCTACGCGCGCAGTAGCCACGTACAGCACGGCCCAGATCCTCTCGGCCCTCTACCGCAAATGCAGCTACATCAAG TTTTTGATGCGCCCGTTTGGAGCCAGCCAAGACGTTGCATCATCACCGTCATGGTCATCAGGGCCCACACTCGCC TCGCTTGACCGGCATCGCATCGCCATGATTTACCTGGCCCAAGCCCACGCCTACAAAACCAACACGACGCGCGTC ACAGCCGCATCCATCTCGTCGTCGTGGGACGCCACGGATCTGGCGGGCATTGACCACGTCGGGCTGACAAAGGAC CACTTGAGCCGCCTGGTGCAGAGCTTTGACTATCTTCCAGGACTCGAGTGCCAGTCTGCGTCACTGCCTCGAGTC CTTTACGGCCAGTCGTCGTCGTCGTCGCTGCTGCAGAGGGAGCAGGATCGTATCGATCCTCTGCGAGACGAGGAA GACTATGCGTTGTGGCTGCCGAGGCATTTCGCTAGCAACCATGGCTCTGACGCCATTGATTTCCAACGCGCTTTG ACTTTTTTCTGCAGGGCGCAGAATGATTTGGAGCAAATCATTATTTCCCTCCAAGACGTCAATTACGATGATGAT GATGTTGCTTCTTGGTGCTGA |
| Gene | >OphauG2|6821 ATGGCTCGTCTTGTCAGCGGCCGGCTTCACGTGCAGACGCTGCCCAGGCATACTTATTCGGTCAAACAAACGCTC AAGAGCGCCGAGAGTAAGAATCCAAGTTTGATTATTTATTTTTGCTCCAAATACTACATCTATAAAGAATACTTG TGTATAAATTTGTCAAAACCAGCGCTCATGGCTTCACCGTTGCAGGACTCGTCGGCCTCTTTCGACTGCTGGCAC CAGACATTAAGCCCTCGAGGCTCTGCATCAACGTCATTGCCTCTTGGCACGGGCTCAAGGTGTGCGAAGTGATGC ACAATGACACTACAGCCCGCTTTCAAGGCATTGCTACGCGCGCAGTAGCCACGTACAGCACGGCCCAGATCCTCT CGGCCCTCTACCGCAAATGCAGCTACATCAAGTTTTTGATGCGCCCGTTTGGAGCCAGCCAAGACGTTGCATCAT CACCGTCATGGTCATCAGGGCCCACACTCGCCTCGCTTGACCGGCATCGCATCGCCATGATTTACCTGGCCCAAG CCCACGCCTACAAAACCAACACGACGCGCGTCACAGCCGCATCCATCTCGTCGTCGTGGGACGCCACGGATCTGG CGGGCATTGACCACGTCGGGCTGACAAAGGACCACTTGAGCCGCCTGGTGCAGAGCTTTGACTATCTTCCAGGAC TCGAGTGCCAGTCTGCGTCACTGCCTCGAGTCCTTTACGGCCAGTCGTCGTCGTCGTCGCTGCTGCAGAGGGAGC AGGATCGTATCGATCCTCTGCGAGACGAGGAAGACTATGCGTTGTGGCTGCCGAGGCATTTCGCTAGCAACCATG GCTCTGACGCCATTGATTTCCAACGCGCTTTGACTTTTTTCTGCAGGGCGCAGAATGATTTGGAGCAAATCATTA TTTCCCTCCAAGACGTCAATTACGATGATGATGATGTTGCTTCTTGGTGCTGA |