© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6815 |
| Gene name | |
| Location | Contig_735:848..1696 |
| Strand | - |
| Gene length (bp) | 848 |
| Transcript length (bp) | 777 |
| Coding sequence length (bp) | 777 |
| Protein length (aa) | 259 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01012 | ETF | Electron transfer flavoprotein domain | 6.5E-45 | 29 | 215 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54YZ4|ETFB_DICDI | Electron transfer flavoprotein subunit beta OS=Dictyostelium discoideum GN=etfb PE=3 SV=1 | 3 | 254 | 9.0E-98 |
| sp|P38117|ETFB_HUMAN | Electron transfer flavoprotein subunit beta OS=Homo sapiens GN=ETFB PE=1 SV=3 | 1 | 256 | 1.0E-97 |
| sp|Q2TBV3|ETFB_BOVIN | Electron transfer flavoprotein subunit beta OS=Bos taurus GN=ETFB PE=1 SV=3 | 1 | 256 | 4.0E-97 |
| sp|Q5RFK0|ETFB_PONAB | Electron transfer flavoprotein subunit beta OS=Pongo abelii GN=ETFB PE=2 SV=3 | 1 | 256 | 5.0E-97 |
| sp|Q9DCW4|ETFB_MOUSE | Electron transfer flavoprotein subunit beta OS=Mus musculus GN=Etfb PE=1 SV=3 | 1 | 256 | 9.0E-96 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54YZ4|ETFB_DICDI | Electron transfer flavoprotein subunit beta OS=Dictyostelium discoideum GN=etfb PE=3 SV=1 | 3 | 254 | 9.0E-98 |
| sp|P38117|ETFB_HUMAN | Electron transfer flavoprotein subunit beta OS=Homo sapiens GN=ETFB PE=1 SV=3 | 1 | 256 | 1.0E-97 |
| sp|Q2TBV3|ETFB_BOVIN | Electron transfer flavoprotein subunit beta OS=Bos taurus GN=ETFB PE=1 SV=3 | 1 | 256 | 4.0E-97 |
| sp|Q5RFK0|ETFB_PONAB | Electron transfer flavoprotein subunit beta OS=Pongo abelii GN=ETFB PE=2 SV=3 | 1 | 256 | 5.0E-97 |
| sp|Q9DCW4|ETFB_MOUSE | Electron transfer flavoprotein subunit beta OS=Mus musculus GN=Etfb PE=1 SV=3 | 1 | 256 | 9.0E-96 |
| sp|Q68FU3|ETFB_RAT | Electron transfer flavoprotein subunit beta OS=Rattus norvegicus GN=Etfb PE=2 SV=3 | 1 | 256 | 1.0E-95 |
| sp|Q6UAQ8|ETFB_PIG | Electron transfer flavoprotein subunit beta OS=Sus scrofa GN=ETFB PE=2 SV=3 | 1 | 256 | 3.0E-95 |
| sp|P42940|ETFB_YEAST | Probable electron transfer flavoprotein subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIR1 PE=1 SV=1 | 4 | 258 | 8.0E-87 |
| sp|P53575|ETFB_BRADU | Electron transfer flavoprotein subunit beta OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=etfB PE=3 SV=2 | 4 | 258 | 5.0E-85 |
| sp|Q7F9U3|ETFB_ORYSJ | Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=ETFB PE=3 SV=1 | 4 | 253 | 3.0E-84 |
| sp|Q9HZP6|ETFB_PSEAE | Electron transfer flavoprotein subunit beta OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=etfB PE=3 SV=1 | 4 | 253 | 3.0E-84 |
| sp|A2XQV4|ETFB_ORYSI | Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. indica GN=ETFB PE=3 SV=1 | 4 | 253 | 4.0E-84 |
| sp|Q9LSW8|ETFB_ARATH | Electron transfer flavoprotein subunit beta, mitochondrial OS=Arabidopsis thaliana GN=ETFB PE=1 SV=1 | 4 | 253 | 9.0E-84 |
| sp|P38975|ETFB_PARDE | Electron transfer flavoprotein subunit beta OS=Paracoccus denitrificans GN=etfB PE=1 SV=1 | 4 | 258 | 4.0E-82 |
| sp|Q9UTH2|ETFB_SCHPO | Probable electron transfer flavoprotein subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1805.02c PE=3 SV=1 | 1 | 258 | 3.0E-78 |
| sp|P94550|ETFB_BACSU | Electron transfer flavoprotein subunit beta OS=Bacillus subtilis (strain 168) GN=etfB PE=3 SV=1 | 4 | 207 | 1.0E-30 |
| sp|P97089|ETFB_THETC | Electron transfer flavoprotein subunit beta OS=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfB PE=3 SV=1 | 4 | 208 | 1.0E-26 |
| sp|P9WNG7|ETFB_MYCTU | Electron transfer flavoprotein subunit beta OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=etfB PE=1 SV=1 | 5 | 246 | 2.0E-26 |
| sp|P9WNG6|ETFB_MYCTO | Electron transfer flavoprotein subunit beta OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=etfB PE=3 SV=1 | 5 | 246 | 2.0E-26 |
| sp|P64098|ETFB_MYCBO | Electron transfer flavoprotein subunit beta OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=etfB PE=1 SV=1 | 5 | 246 | 2.0E-26 |
| sp|O33095|ETFB_MYCLE | Electron transfer flavoprotein subunit beta OS=Mycobacterium leprae (strain TN) GN=etfB PE=3 SV=1 | 5 | 246 | 1.0E-24 |
| sp|O85691|ETFB_MEGEL | Electron transfer flavoprotein subunit beta OS=Megasphaera elsdenii GN=etfB PE=3 SV=1 | 4 | 244 | 7.0E-24 |
| sp|P53570|ETFB_METME | Electron transfer flavoprotein subunit beta OS=Methylophilus methylotrophus GN=etfB PE=1 SV=1 | 4 | 219 | 1.0E-21 |
| sp|P52040|ETFB_CLOAB | Electron transfer flavoprotein subunit beta OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=etfB PE=3 SV=2 | 4 | 219 | 8.0E-19 |
| sp|P53576|FIXA_AZOVI | Protein FixA OS=Azotobacter vinelandii GN=fixA PE=3 SV=1 | 7 | 242 | 1.0E-17 |
| sp|G3KIM7|ETFB_CLOPR | Acryloyl-CoA reductase electron transfer subunit gamma OS=Clostridium propionicum GN=acrB PE=1 SV=1 | 4 | 217 | 1.0E-17 |
| sp|Q53210|FIXA_RHISN | Protein FixA OS=Rhizobium sp. (strain NGR234) GN=fixA PE=3 SV=1 | 4 | 240 | 3.0E-16 |
| sp|P53577|FIXA_BRADU | Protein FixA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=fixA PE=3 SV=2 | 7 | 221 | 2.0E-15 |
| sp|P26482|FIXA_AZOC5 | Protein FixA OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=fixA PE=3 SV=1 | 4 | 221 | 2.0E-14 |
| sp|Q05559|FIXA_RHILP | Protein FixA OS=Rhizobium leguminosarum bv. phaseoli GN=fixA PE=3 SV=1 | 4 | 236 | 9.0E-14 |
| sp|P09818|FIXA_RHIME | Protein FixA OS=Rhizobium meliloti (strain 1021) GN=fixA PE=3 SV=1 | 4 | 209 | 5.0E-13 |
| sp|Q46908|YGCR_ECOLI | Putative electron transfer flavoprotein subunit YgcR OS=Escherichia coli (strain K12) GN=ygcR PE=3 SV=2 | 56 | 184 | 1.0E-09 |
| sp|Q8FLA3|FIXA_ECOL6 | Protein FixA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fixA PE=3 SV=2 | 22 | 237 | 2.0E-08 |
| sp|B7MAG4|FIXA_ECO45 | Protein FixA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fixA PE=3 SV=1 | 22 | 237 | 2.0E-08 |
| sp|B7UI87|FIXA_ECO27 | Protein FixA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fixA PE=3 SV=1 | 22 | 237 | 2.0E-08 |
| sp|Q0TLU8|FIXA_ECOL5 | Protein FixA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fixA PE=3 SV=1 | 22 | 237 | 3.0E-08 |
| sp|B7MNP8|FIXA_ECO81 | Protein FixA OS=Escherichia coli O81 (strain ED1a) GN=fixA PE=3 SV=1 | 22 | 237 | 3.0E-08 |
| sp|B1LFX5|FIXA_ECOSM | Protein FixA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fixA PE=3 SV=1 | 22 | 237 | 5.0E-06 |
| sp|B7NHE5|FIXA_ECO7I | Protein FixA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fixA PE=3 SV=1 | 22 | 237 | 5.0E-06 |
| sp|B7N7R6|FIXA_ECOLU | Protein FixA OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fixA PE=3 SV=1 | 120 | 237 | 7.0E-06 |
| sp|P60566|FIXA_ECOLI | Protein FixA OS=Escherichia coli (strain K12) GN=fixA PE=1 SV=1 | 120 | 237 | 8.0E-06 |
| sp|B1IRD5|FIXA_ECOLC | Protein FixA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fixA PE=3 SV=1 | 120 | 237 | 8.0E-06 |
| sp|A7ZVZ3|FIXA_ECOHS | Protein FixA OS=Escherichia coli O9:H4 (strain HS) GN=fixA PE=3 SV=1 | 120 | 237 | 8.0E-06 |
| sp|B1XBG6|FIXA_ECODH | Protein FixA OS=Escherichia coli (strain K12 / DH10B) GN=fixA PE=3 SV=1 | 120 | 237 | 8.0E-06 |
| sp|C4ZPW7|FIXA_ECOBW | Protein FixA OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=fixA PE=3 SV=1 | 120 | 237 | 8.0E-06 |
| sp|P60567|FIXA_ECO57 | Protein FixA OS=Escherichia coli O157:H7 GN=fixA PE=3 SV=1 | 120 | 237 | 8.0E-06 |
| sp|A7ZHD4|FIXA_ECO24 | Protein FixA OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fixA PE=3 SV=1 | 120 | 237 | 8.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6815 MSSLRILVPIKRVIDYAVKPRVNKARTGVETAGVKHSMNPFDELSVEEAVRIREKKRAPGGVEDICAISAGPAKA VDVLRTAMAMGADRGIHVEVPEGQELEPLTVAKMLRVAVEQQKSNLVVLGKQSIDDDAGQTGQMLAGLLDWPQAT QASKVEFGQGDSVTVTREVDGGVETIRARLPMVVTTDLRLNEPRYANLPNIMKAKRKKLDTTTLEALGIKNERRL KVLRVEEPPPRQGGAKVEDVGGLVSRLKELGAL* |
| Coding | >OphauG2|6815 ATGTCTTCGCTTCGCATTCTCGTCCCCATCAAGCGGGTAATTGACTATGCTGTCAAGCCACGGGTCAACAAGGCG AGGACAGGAGTGGAAACAGCCGGGGTGAAGCACTCAATGAATCCCTTTGACGAGCTGTCGGTGGAGGAGGCGGTT CGGATCCGGGAGAAGAAGCGGGCTCCGGGAGGAGTGGAGGACATCTGTGCCATCTCGGCAGGACCGGCCAAGGCG GTGGATGTGCTGCGGACGGCCATGGCCATGGGGGCGGACCGAGGCATTCACGTCGAGGTGCCCGAGGGCCAAGAG CTGGAGCCATTGACCGTGGCCAAAATGCTACGGGTGGCGGTGGAGCAGCAAAAGAGCAATCTGGTGGTGCTGGGC AAGCAGAGCATCGACGACGATGCGGGCCAGACGGGCCAGATGCTGGCGGGGCTGTTGGACTGGCCGCAGGCAACA CAAGCAAGCAAGGTGGAGTTTGGCCAAGGGGACAGCGTGACGGTGACGCGCGAGGTGGATGGGGGCGTTGAGACG ATACGGGCGCGGCTTCCCATGGTGGTGACGACGGACCTGCGTCTCAACGAGCCGCGCTACGCCAACCTGCCCAAC ATTATGAAGGCCAAGAGGAAGAAGCTGGACACGACGACTCTGGAGGCGCTGGGGATTAAGAATGAGCGGCGGCTC AAGGTGCTCAGGGTGGAGGAGCCGCCGCCGCGGCAGGGAGGAGCAAAGGTGGAAGACGTGGGGGGGCTGGTGAGC AGGCTCAAGGAGCTCGGGGCGCTGTAG |
| Transcript | >OphauG2|6815 ATGTCTTCGCTTCGCATTCTCGTCCCCATCAAGCGGGTAATTGACTATGCTGTCAAGCCACGGGTCAACAAGGCG AGGACAGGAGTGGAAACAGCCGGGGTGAAGCACTCAATGAATCCCTTTGACGAGCTGTCGGTGGAGGAGGCGGTT CGGATCCGGGAGAAGAAGCGGGCTCCGGGAGGAGTGGAGGACATCTGTGCCATCTCGGCAGGACCGGCCAAGGCG GTGGATGTGCTGCGGACGGCCATGGCCATGGGGGCGGACCGAGGCATTCACGTCGAGGTGCCCGAGGGCCAAGAG CTGGAGCCATTGACCGTGGCCAAAATGCTACGGGTGGCGGTGGAGCAGCAAAAGAGCAATCTGGTGGTGCTGGGC AAGCAGAGCATCGACGACGATGCGGGCCAGACGGGCCAGATGCTGGCGGGGCTGTTGGACTGGCCGCAGGCAACA CAAGCAAGCAAGGTGGAGTTTGGCCAAGGGGACAGCGTGACGGTGACGCGCGAGGTGGATGGGGGCGTTGAGACG ATACGGGCGCGGCTTCCCATGGTGGTGACGACGGACCTGCGTCTCAACGAGCCGCGCTACGCCAACCTGCCCAAC ATTATGAAGGCCAAGAGGAAGAAGCTGGACACGACGACTCTGGAGGCGCTGGGGATTAAGAATGAGCGGCGGCTC AAGGTGCTCAGGGTGGAGGAGCCGCCGCCGCGGCAGGGAGGAGCAAAGGTGGAAGACGTGGGGGGGCTGGTGAGC AGGCTCAAGGAGCTCGGGGCGCTGTAG |
| Gene | >OphauG2|6815 ATGTCTTCGCTTCGCATTCTCGTCCCCATCAAGCGGGTAATTGACTATGCTGTAGGTGCTGGGGGACAATGGCGC AGCAGAGTGAGAGCAATGGGGACACTGACATGGACGCTGGACTGCAGGTCAAGCCACGGGTCAACAAGGCGAGGA CAGGAGTGGAAACAGCCGGGGTGAAGCACTCAATGAATCCCTTTGACGAGCTGTCGGTGGAGGAGGCGGTTCGGA TCCGGGAGAAGAAGCGGGCTCCGGGAGGAGTGGAGGACATCTGTGCCATCTCGGCAGGACCGGCCAAGGCGGTGG ATGTGCTGCGGACGGCCATGGCCATGGGGGCGGACCGAGGCATTCACGTCGAGGTGCCCGAGGGCCAAGAGCTGG AGCCATTGACCGTGGCCAAAATGCTACGGGTGGCGGTGGAGCAGCAAAAGAGCAATCTGGTGGTGCTGGGCAAGC AGAGCATCGACGACGATGCGGGCCAGACGGGCCAGATGCTGGCGGGGCTGTTGGACTGGCCGCAGGCAACACAAG CAAGCAAGGTGGAGTTTGGCCAAGGGGACAGCGTGACGGTGACGCGCGAGGTGGATGGGGGCGTTGAGACGATAC GGGCGCGGCTTCCCATGGTGGTGACGACGGACCTGCGTCTCAACGAGCCGCGCTACGCCAACCTGCCCAACATTA TGAAGGCCAAGAGGAAGAAGCTGGACACGACGACTCTGGAGGCGCTGGGGATTAAGAATGAGCGGCGGCTCAAGG TGCTCAGGGTGGAGGAGCCGCCGCCGCGGCAGGGAGGAGCAAAGGTGGAAGACGTGGGGGGGCTGGTGAGCAGGC TCAAGGAGCTCGGGGCGCTGTAG |