Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6803
Gene name
LocationContig_731:118..1872
Strand-
Gene length (bp)1754
Transcript length (bp)1581
Coding sequence length (bp)1581
Protein length (aa) 527

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08549 SWI-SNF_Ssr4_N SWI/SNF and RSC complexes subunit Ssr4 N-terminal 1.8E-98 5 213
PF20497 SWI-SNF_Ssr4_C SWI/SNF and RSC complexes subunit Ssr4 C-terminal 2.3E-92 265 519

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9P7Y0|SSR4_SCHPO SWI/SNF and RSC complexes subunit ssr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr4 PE=1 SV=1 9 315 6.0E-16

GO

GO Term Description Terminal node
GO:0006338 chromatin remodeling Yes
GO:0016043 cellular component organization No
GO:0071840 cellular component organization or biogenesis No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0006325 chromatin organization No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4073
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6803 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|3024
Ophiocordyceps camponoti-floridani Ophcf2|07335
Ophiocordyceps camponoti-rufipedis Ophun1|5598
Ophiocordyceps kimflemingae Ophio5|8378
Ophiocordyceps subramaniannii Hirsu2|8213

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6803
MAQMDPSHSVPQELMSHVHLVSAFRYPTVARLDVNEVVRWLMNAPQVARDRAPFFWTYLDKPTDGTVLLTWQPLQ
RLNSNFATDGFIWAPPEQVYKQELGNGLILEIYYLKAGYMPGEQFALHARRRFRLMPMPGHPNPPQIDISLFIVH
YGPSDHNDRIPAAMVPYDERVNAIMQQRHYLLRGGQIRRKEFMLSDRVNWPMLPELTRQQMAPQMGPQMMGRGVP
QQMAYPPQPVAPPPAKRARHSAGQGAPPVVGPALQPTEGLDDDEDITRGDMFDQVTQREVSLGRFKQSYEWMEEI
LSSAYRMNQIMPSDLNLGLKGELSALTEGIFTAQGVEVFTQAPDKPYVGKLDEGLADEFRKRVDEYIKTTQAEMD
DIKAQHATTMASLRTGSVFTVKEAELRALSVEPAAAEPAKGEESSEPAGGEQESEGQARHRPMFKKAVDDVSRDV
EAAIGRKIVRHPNVRRIQQGGYQAPEPQLAAHMSRQASHNSGVMMGDADVDMGGTAAGLLDQMHSGMSPPARPRT
P*
Coding >OphauG2|6803
ATGGCCCAAATGGACCCCAGCCATAGCGTTCCACAGGAACTTATGTCGCACGTTCACCTGGTATCGGCATTTCGA
TATCCTACAGTGGCACGGCTCGACGTCAACGAGGTTGTCAGGTGGCTTATGAATGCTCCACAGGTTGCCAGAGAC
CGAGCTCCCTTTTTTTGGACCTATCTTGACAAGCCGACCGACGGCACCGTGCTGCTGACATGGCAGCCGCTGCAA
CGGCTCAACTCCAACTTTGCAACCGACGGCTTCATCTGGGCGCCGCCAGAACAAGTCTACAAGCAAGAGCTGGGC
AACGGGCTGATTCTCGAGATTTACTACCTCAAGGCCGGATACATGCCCGGCGAGCAGTTTGCGCTGCACGCGCGA
CGACGCTTCCGCCTGATGCCCATGCCGGGCCACCCCAATCCACCTCAGATTGATATCAGCCTGTTTATTGTGCAC
TACGGCCCCTCGGATCACAATGACCGCATTCCCGCCGCCATGGTGCCCTACGACGAGCGAGTCAATGCCATCATG
CAGCAGCGCCATTACCTTTTGCGAGGCGGTCAGATCAGGCGCAAGGAATTCATGCTCTCGGACCGCGTCAACTGG
CCCATGTTGCCCGAGCTTACGCGGCAGCAGATGGCGCCCCAGATGGGACCACAGATGATGGGCAGAGGCGTGCCT
CAGCAGATGGCATATCCGCCTCAGCCTGTTGCGCCGCCGCCGGCTAAGCGTGCTAGGCATAGTGCAGGACAAGGC
GCCCCCCCCGTGGTTGGCCCGGCCTTGCAGCCGACCGAGGGGCTAGATGACGATGAAGACATTACCAGGGGCGAC
ATGTTTGACCAAGTCACCCAGCGAGAAGTGTCGCTGGGCCGATTCAAACAGAGCTACGAGTGGATGGAGGAGATT
TTGTCCTCAGCCTACAGGATGAACCAGATTATGCCGTCGGATCTCAACCTGGGGCTCAAGGGCGAGCTGTCAGCG
CTGACCGAGGGCATCTTTACTGCGCAAGGCGTCGAAGTCTTTACTCAAGCTCCCGATAAACCGTATGTGGGCAAG
CTTGACGAGGGCTTGGCCGACGAGTTTCGCAAGCGAGTCGACGAGTACATCAAGACGACCCAGGCGGAAATGGAC
GACATCAAGGCTCAACACGCCACGACCATGGCCTCCCTCAGGACAGGCTCCGTCTTTACCGTCAAGGAGGCCGAG
CTACGGGCTCTGTCGGTCGAGCCCGCTGCGGCGGAGCCTGCCAAGGGCGAGGAGTCGAGCGAGCCGGCCGGCGGC
GAGCAAGAGTCCGAGGGCCAGGCGCGACACCGGCCCATGTTCAAAAAAGCCGTCGACGACGTGTCGCGCGACGTC
GAGGCGGCCATTGGACGCAAGATAGTACGCCACCCCAATGTTAGGCGCATTCAGCAGGGCGGCTATCAGGCTCCA
GAGCCGCAGCTGGCGGCGCACATGTCTCGGCAGGCGTCGCACAACAGCGGCGTCATGATGGGCGACGCAGACGTG
GACATGGGCGGCACGGCAGCCGGCTTGCTGGACCAGATGCACTCGGGCATGTCCCCGCCGGCACGCCCTCGCACG
CCATGA
Transcript >OphauG2|6803
ATGGCCCAAATGGACCCCAGCCATAGCGTTCCACAGGAACTTATGTCGCACGTTCACCTGGTATCGGCATTTCGA
TATCCTACAGTGGCACGGCTCGACGTCAACGAGGTTGTCAGGTGGCTTATGAATGCTCCACAGGTTGCCAGAGAC
CGAGCTCCCTTTTTTTGGACCTATCTTGACAAGCCGACCGACGGCACCGTGCTGCTGACATGGCAGCCGCTGCAA
CGGCTCAACTCCAACTTTGCAACCGACGGCTTCATCTGGGCGCCGCCAGAACAAGTCTACAAGCAAGAGCTGGGC
AACGGGCTGATTCTCGAGATTTACTACCTCAAGGCCGGATACATGCCCGGCGAGCAGTTTGCGCTGCACGCGCGA
CGACGCTTCCGCCTGATGCCCATGCCGGGCCACCCCAATCCACCTCAGATTGATATCAGCCTGTTTATTGTGCAC
TACGGCCCCTCGGATCACAATGACCGCATTCCCGCCGCCATGGTGCCCTACGACGAGCGAGTCAATGCCATCATG
CAGCAGCGCCATTACCTTTTGCGAGGCGGTCAGATCAGGCGCAAGGAATTCATGCTCTCGGACCGCGTCAACTGG
CCCATGTTGCCCGAGCTTACGCGGCAGCAGATGGCGCCCCAGATGGGACCACAGATGATGGGCAGAGGCGTGCCT
CAGCAGATGGCATATCCGCCTCAGCCTGTTGCGCCGCCGCCGGCTAAGCGTGCTAGGCATAGTGCAGGACAAGGC
GCCCCCCCCGTGGTTGGCCCGGCCTTGCAGCCGACCGAGGGGCTAGATGACGATGAAGACATTACCAGGGGCGAC
ATGTTTGACCAAGTCACCCAGCGAGAAGTGTCGCTGGGCCGATTCAAACAGAGCTACGAGTGGATGGAGGAGATT
TTGTCCTCAGCCTACAGGATGAACCAGATTATGCCGTCGGATCTCAACCTGGGGCTCAAGGGCGAGCTGTCAGCG
CTGACCGAGGGCATCTTTACTGCGCAAGGCGTCGAAGTCTTTACTCAAGCTCCCGATAAACCGTATGTGGGCAAG
CTTGACGAGGGCTTGGCCGACGAGTTTCGCAAGCGAGTCGACGAGTACATCAAGACGACCCAGGCGGAAATGGAC
GACATCAAGGCTCAACACGCCACGACCATGGCCTCCCTCAGGACAGGCTCCGTCTTTACCGTCAAGGAGGCCGAG
CTACGGGCTCTGTCGGTCGAGCCCGCTGCGGCGGAGCCTGCCAAGGGCGAGGAGTCGAGCGAGCCGGCCGGCGGC
GAGCAAGAGTCCGAGGGCCAGGCGCGACACCGGCCCATGTTCAAAAAAGCCGTCGACGACGTGTCGCGCGACGTC
GAGGCGGCCATTGGACGCAAGATAGTACGCCACCCCAATGTTAGGCGCATTCAGCAGGGCGGCTATCAGGCTCCA
GAGCCGCAGCTGGCGGCGCACATGTCTCGGCAGGCGTCGCACAACAGCGGCGTCATGATGGGCGACGCAGACGTG
GACATGGGCGGCACGGCAGCCGGCTTGCTGGACCAGATGCACTCGGGCATGTCCCCGCCGGCACGCCCTCGCACG
CCATGA
Gene >OphauG2|6803
ATGGCCCAAATGGACCCCAGCCATAGCGTTCCACAGGAACTTGTACGTGCCTAGCTGTTGACGCGGTTCTGAACA
AGAGGCAGCCGTGTGGGCTGGCTAACAAGGGCGCTGTGCAGATGTCGCACGTTCACCTGGTATCGGCATTTCGAT
ATCCTACAGTGGCACGGCTCGACGTCAACGAGGTTGTCAGGTGGCTTATGAATGCTCCACAGGTTGCCAGAGACC
GAGCTCCCTTTTTTTGGACCTATCTTGACAAGCCGACCGACGGCACCGTGCTGCTGACATGGCAGCCGCTGCAAC
GGCTCAACTCCAACTTTGCAACCGACGGCTTCATCTGGGCGCCGCCAGAACAAGTCTACAAGCAAGAGCTGGGCA
ACGGGCTGGTGCGTGCTTGGCCCTGTTGGTGTCGAGCCTCGAGACTCTGTACTGATGCAGCCCCCAGATTCTCGA
GATTTACTACCTCAAGGCCGGATACATGCCCGGCGAGCAGTTTGCGCTGCACGCGCGACGACGCTTCCGCCTGAT
GCCCATGCCGGGCCACCCCAATCCACCTCAGATTGATATCAGCCTGTTTATTGTGCACTACGGCCCCTCGGATCA
CAATGACCGCATTCCCGCCGCCATGGTGCCCTACGACGAGCGAGTCAATGCCATCATGCAGCAGCGCCATTACCT
TTTGCGAGGCGGTCAGATCAGGCGCAAGGAATTCATGCTCTCGGACCGCGTCAACTGGCCCATGTTGCCCGAGCT
TACGCGGCAGCAGATGGCGCCCCAGATGGGACCACAGATGATGGGCAGAGGCGTGCCTCAGCAGATGGCATATCC
GCCTCAGCCTGTTGCGCCGCCGCCGGCTAAGCGTGCTAGGCATAGTGCAGGACAAGGCGCCCCCCCCGTGGTTGG
CCCGGCCTTGCAGCCGACCGAGGGGCTAGATGACGATGAAGACATTACCAGGGGCGACATGTTTGACCAAGTCAC
CCAGCGAGAAGTGTCGCTGGGCCGATTCAAACAGAGCTACGAGTGGATGGAGGAGATTTTGTCCTCAGCCTACAG
GATGAACCAGATTATGCCGTCGGATCTCAACCTGGGGCTCAAGGGCGAGCTGTCAGCGCTGACCGAGGGCATCTT
TACTGCGCAAGGCGTCGAAGTCTTTACTCAAGCTCCCGATAAACCGTATGTGGGCAAGCTTGACGAGGGCTTGGC
CGACGAGTTTCGCAAGCGAGTCGACGAGTACATCAAGACGACCCAGGCGGAAATGGACGACATCAAGGCTCAACA
CGCCACGACCATGGCCTCCCTCAGGACAGGCTCCGTCTTTACCGTCAAGGAGGCCGAGCTACGGGCTCTGTCGGT
CGAGCCCGCTGCGGCGGAGCCTGCCAAGGGCGAGGAGTCGAGCGAGCCGGCCGGCGGCGAGCAAGAGTCCGAGGG
CCAGGCGCGACACCGGCCCATGTTCAAAAAAGCCGTCGACGACGTGTCGCGCGACGTCGAGGCGGCCATTGGACG
CAAGATAGTACGCCACCCCAATGTTAGGCGCATTCAGCAGGGCGGCTATCAGGCTCCAGAGCCGCAGCTGGCGGC
GCACATGTCTCGGCAGGCGTCGCACAACAGCGGCGTCATGATGGGCGACGCAGACGTGGACATGGGCGGCACGGC
AGCCGGCTTGCTGGACCAGATGCACTCGGGCATGTCGTCGACGTCGACACCCGTCAACAATGCGTCGACGCCCCA
GCCCGCCGGCACGCCCTCGCACGCCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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