Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6788
Gene name
LocationContig_73:6595..7677
Strand+
Gene length (bp)1082
Transcript length (bp)951
Coding sequence length (bp)951
Protein length (aa) 317

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00804 Syntaxin Syntaxin 1.2E-27 55 245
PF05739 SNARE SNARE domain 1.9E-14 249 298

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9USH7|PSY1_SCHPO Syntaxin-like protein psy1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psy1 PE=3 SV=1 51 312 5.0E-42
sp|Q59YF0|SSO2_CANAL Protein transport protein SSO2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SSO2 PE=3 SV=1 7 303 7.0E-33
sp|P39926|SSO2_YEAST Protein SSO2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSO2 PE=1 SV=2 23 298 9.0E-31
sp|P32867|SSO1_YEAST Protein SSO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSO1 PE=1 SV=2 56 289 2.0E-27
sp|Q16623|STX1A_HUMAN Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1 53 303 5.0E-20
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Swissprot ID Swissprot Description Start End E-value
sp|Q9USH7|PSY1_SCHPO Syntaxin-like protein psy1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psy1 PE=3 SV=1 51 312 5.0E-42
sp|Q59YF0|SSO2_CANAL Protein transport protein SSO2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SSO2 PE=3 SV=1 7 303 7.0E-33
sp|P39926|SSO2_YEAST Protein SSO2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSO2 PE=1 SV=2 23 298 9.0E-31
sp|P32867|SSO1_YEAST Protein SSO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSO1 PE=1 SV=2 56 289 2.0E-27
sp|Q16623|STX1A_HUMAN Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1 53 303 5.0E-20
sp|P32851|STX1A_RAT Syntaxin-1A OS=Rattus norvegicus GN=Stx1a PE=1 SV=1 53 303 9.0E-20
sp|P32850|STX1A_BOVIN Syntaxin-1A OS=Bos taurus GN=STX1A PE=1 SV=1 53 305 1.0E-19
sp|O35526|STX1A_MOUSE Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3 53 303 1.0E-19
sp|P32856|STX2_HUMAN Syntaxin-2 OS=Homo sapiens GN=STX2 PE=2 SV=3 53 306 1.0E-19
sp|Q5R4L2|STX1A_PONAB Syntaxin-1A OS=Pongo abelii GN=STX1A PE=2 SV=1 53 303 2.0E-19
sp|Q16932|STX_APLCA Syntaxin OS=Aplysia californica PE=2 SV=1 53 297 2.0E-19
sp|P61265|STX1B_RAT Syntaxin-1B OS=Rattus norvegicus GN=Stx1b PE=1 SV=1 53 306 9.0E-19
sp|P61266|STX1B_HUMAN Syntaxin-1B OS=Homo sapiens GN=STX1B PE=1 SV=1 53 306 9.0E-19
sp|P61264|STX1B_MOUSE Syntaxin-1B OS=Mus musculus GN=Stx1b PE=1 SV=1 53 306 9.0E-19
sp|Q13277|STX3_HUMAN Syntaxin-3 OS=Homo sapiens GN=STX3 PE=1 SV=3 53 308 1.0E-18
sp|P61268|STX1B_SHEEP Syntaxin-1B OS=Ovis aries GN=STX1B PE=2 SV=1 53 306 1.0E-18
sp|P61267|STX1B_BOVIN Syntaxin-1B OS=Bos taurus GN=STX1B PE=1 SV=1 53 306 1.0E-18
sp|O16000|STX1A_CAEEL Syntaxin-1A homolog OS=Caenorhabditis elegans GN=unc-64 PE=1 SV=1 53 296 3.0E-18
sp|Q08849|STX3_RAT Syntaxin-3 OS=Rattus norvegicus GN=Stx3 PE=2 SV=1 53 308 3.0E-18
sp|Q64704|STX3_MOUSE Syntaxin-3 OS=Mus musculus GN=Stx3 PE=1 SV=1 53 282 1.0E-17
sp|Q9SRV7|SY131_ARATH Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=3 SV=1 16 287 2.0E-17
sp|Q08850|STX4_RAT Syntaxin-4 OS=Rattus norvegicus GN=Stx4 PE=1 SV=1 132 303 2.0E-17
sp|P70452|STX4_MOUSE Syntaxin-4 OS=Mus musculus GN=Stx4 PE=1 SV=1 132 303 4.0E-17
sp|Q12846|STX4_HUMAN Syntaxin-4 OS=Homo sapiens GN=STX4 PE=1 SV=2 54 304 6.0E-17
sp|A8WVD0|STX1A_CAEBR Syntaxin-1A OS=Caenorhabditis briggsae GN=unc-64 PE=3 SV=1 36 282 1.0E-16
sp|Q24547|STX1A_DROME Syntaxin-1A OS=Drosophila melanogaster GN=Syx1A PE=1 SV=1 53 297 3.0E-16
sp|O64791|SY124_ARATH Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1 51 302 1.0E-14
sp|Q9ZQZ8|SY123_ARATH Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=2 SV=1 30 288 2.0E-14
sp|Q00262|STX2_MOUSE Syntaxin-2 OS=Mus musculus GN=Stx2 PE=1 SV=1 56 285 3.0E-13
sp|P50279|STX2_RAT Syntaxin-2 OS=Rattus norvegicus GN=Stx2 PE=1 SV=2 56 285 4.0E-13
sp|Q3SWZ3|STX4_BOVIN Syntaxin-4 OS=Bos taurus GN=STX4 PE=2 SV=1 55 302 2.0E-12
sp|Q20024|STX3_CAEEL Putative syntaxin-3 OS=Caenorhabditis elegans GN=syx-3 PE=3 SV=3 56 307 4.0E-12
sp|Q9SXB0|SY125_ARATH Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=2 SV=1 51 288 5.0E-12
sp|Q9ZSD4|SY121_ARATH Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=1 SV=1 48 287 4.0E-10
sp|Q20574|STX2_CAEEL Putative syntaxin-2 OS=Caenorhabditis elegans GN=syx-2 PE=3 SV=4 47 273 7.0E-10
sp|Q8VZU2|SY132_ARATH Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1 149 287 1.0E-09
sp|Q9D3G5|STX11_MOUSE Syntaxin-11 OS=Mus musculus GN=Stx11 PE=1 SV=1 134 288 5.0E-09
sp|Q9SVC2|SY122_ARATH Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=1 SV=1 127 288 9.0E-09
sp|Q42374|SY111_ARATH Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana GN=KN PE=1 SV=1 53 287 2.0E-08
sp|O94651|PEP12_SCHPO Syntaxin pep12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pep12 PE=1 SV=2 214 300 4.0E-08
sp|O75558|STX11_HUMAN Syntaxin-11 OS=Homo sapiens GN=STX11 PE=1 SV=1 134 293 5.0E-08
sp|Q7KVY7|STX4_DROME Syntaxin-4 OS=Drosophila melanogaster GN=Syx4 PE=2 SV=1 156 284 2.0E-06
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 63 0.45

Transmembrane Domains

Domain # Start End Length
1 285 307 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6788
MSNGQQNPFQQGPAYESGHGYGQTGNPYANDQYEMQDYGANNAQTQPSAALSLQDFLNRVQSLRDDIRSLTNEVD
HIGQLHQRTLGSTDGQARQQLEQTVAQTQIRNTAVKDGIKSLERDLARTTDSSRATKSTQLQSLKTFFKSELDKY
QSIESDYRQKYREQIARQYRIVNPDASDEEIREAAEADWGNEGVFQTALRTNRTGHASSVLGNVRARHSELQRIE
QTLAELSIIYQELATLVEQQEPVIQAAETNAQNTVENMEKGNEQVKQANKHARNRRKLKWWCFFIVVLIIIAIAL
GVGLGICLTGNRCGSK*
Coding >OphauG2|6788
ATGTCCAACGGCCAGCAGAACCCCTTTCAGCAGGGCCCTGCCTACGAGTCTGGCCACGGCTATGGCCAGACGGGC
AATCCCTACGCAAACGATCAGTACGAGATGCAAGACTATGGCGCCAACAATGCTCAGACTCAACCCTCGGCTGCC
CTCTCCCTGCAAGATTTCCTCAACCGCGTGCAGAGCCTGCGCGACGACATTCGCAGCTTGACAAACGAGGTTGAC
CACATTGGCCAGCTGCACCAGCGCACGCTGGGAAGCACCGACGGCCAGGCCCGCCAACAACTCGAACAAACCGTC
GCTCAGACGCAGATTCGCAACACAGCCGTCAAGGATGGCATCAAGTCTCTGGAGCGCGATCTGGCTCGCACCACC
GACTCGTCGCGCGCCACAAAGAGCACTCAGCTGCAGTCACTCAAGACATTCTTCAAATCAGAACTAGACAAGTAT
CAGAGCATCGAGAGCGACTATCGCCAAAAATACCGCGAACAAATTGCCCGCCAATACCGCATCGTCAATCCCGAT
GCTTCGGATGAAGAGATTCGCGAGGCCGCCGAAGCCGACTGGGGAAACGAAGGTGTCTTTCAAACAGCTCTTCGC
ACAAACCGCACCGGTCACGCAAGCTCGGTCCTCGGCAACGTCCGCGCCCGCCACAGCGAGCTGCAGCGCATCGAA
CAGACGCTGGCCGAGTTGTCCATCATTTACCAAGAGCTTGCTACCCTTGTGGAGCAGCAGGAGCCTGTTATTCAG
GCTGCCGAGACGAATGCGCAAAATACAGTAGAGAACATGGAGAAGGGCAATGAGCAGGTCAAGCAGGCCAACAAG
CACGCACGCAACCGCCGCAAGCTCAAGTGGTGGTGTTTCTTCATCGTCGTCCTCATCATTATTGCCATTGCCCTG
GGCGTCGGTCTCGGCATCTGTCTAACGGGCAATCGATGCGGTAGCAAGTGA
Transcript >OphauG2|6788
ATGTCCAACGGCCAGCAGAACCCCTTTCAGCAGGGCCCTGCCTACGAGTCTGGCCACGGCTATGGCCAGACGGGC
AATCCCTACGCAAACGATCAGTACGAGATGCAAGACTATGGCGCCAACAATGCTCAGACTCAACCCTCGGCTGCC
CTCTCCCTGCAAGATTTCCTCAACCGCGTGCAGAGCCTGCGCGACGACATTCGCAGCTTGACAAACGAGGTTGAC
CACATTGGCCAGCTGCACCAGCGCACGCTGGGAAGCACCGACGGCCAGGCCCGCCAACAACTCGAACAAACCGTC
GCTCAGACGCAGATTCGCAACACAGCCGTCAAGGATGGCATCAAGTCTCTGGAGCGCGATCTGGCTCGCACCACC
GACTCGTCGCGCGCCACAAAGAGCACTCAGCTGCAGTCACTCAAGACATTCTTCAAATCAGAACTAGACAAGTAT
CAGAGCATCGAGAGCGACTATCGCCAAAAATACCGCGAACAAATTGCCCGCCAATACCGCATCGTCAATCCCGAT
GCTTCGGATGAAGAGATTCGCGAGGCCGCCGAAGCCGACTGGGGAAACGAAGGTGTCTTTCAAACAGCTCTTCGC
ACAAACCGCACCGGTCACGCAAGCTCGGTCCTCGGCAACGTCCGCGCCCGCCACAGCGAGCTGCAGCGCATCGAA
CAGACGCTGGCCGAGTTGTCCATCATTTACCAAGAGCTTGCTACCCTTGTGGAGCAGCAGGAGCCTGTTATTCAG
GCTGCCGAGACGAATGCGCAAAATACAGTAGAGAACATGGAGAAGGGCAATGAGCAGGTCAAGCAGGCCAACAAG
CACGCACGCAACCGCCGCAAGCTCAAGTGGTGGTGTTTCTTCATCGTCGTCCTCATCATTATTGCCATTGCCCTG
GGCGTCGGTCTCGGCATCTGTCTAACGGGCAATCGATGCGGTAGCAAGTGA
Gene >OphauG2|6788
ATGTCCAACGGCCAGCAGAACCCCTTTCAGCAGGGCCCTGCCTACGAGTCTGGCCACGGCTATGGCCAGGTGCGT
CTCGTCCTTCCTGTCGCGATTGGAAAAAAAAAAGCAAATGGCTGACTTTGGCAGACGGGCAATCCCTACGCAAAC
GATCAGTACGAGATGCAAGACTATGGCGCCAACAATGCTCAGACTCAACCCTCGGCTGCCCTCTCCCTGCAAGAT
TTCCTCAACCGCGTGCAGAGCCTGCGCGACGACATTCGCAGCTTGACAAACGAGGTTGACCACATTGGCCAGCTG
CACCAGCGCACGCTGGGAAGCACCGACGGCCAGGCCCGCCAACAACTCGAACAAACCGTCGCTCAGACGCAGATT
CGCAACACAGCCGTCAAGGATGGCATCAAGTCTCTGGAGCGCGATCTGGCTCGCACCACCGACTCGTCGCGCGCC
ACAAAGAGCACTCAGCTGCAGTCACTCAAGACATTCTTCAAATCAGAACTAGACAAGTATCAGAGCATCGAGAGC
GACTATCGCCAAAAATACCGCGAACAAATTGCCCGCCAATACCGCATCGTCAATCCCGATGCTTCGGATGAAGAG
ATTCGCGAGGCCGCCGAAGCCGACTGGGGAAACGAAGGTGTCTTTCAAACAGCTGTACGCTTTGCACTCATTCTT
CTACTGTCAGCAAGCCAAGGGAAATGCTGATTTTTATTTTTTTTGCTCAGCTTCGCACAAACCGCACCGGTCACG
CAAGCTCGGTCCTCGGCAACGTCCGCGCCCGCCACAGCGAGCTGCAGCGCATCGAACAGACGCTGGCCGAGTTGT
CCATCATTTACCAAGAGCTTGCTACCCTTGTGGAGCAGCAGGAGCCTGTTATTCAGGCTGCCGAGACGAATGCGC
AAAATACAGTAGAGAACATGGAGAAGGGCAATGAGCAGGTCAAGCAGGCCAACAAGCACGCACGCAACCGCCGCA
AGCTCAAGTGGTGGTGTTTCTTCATCGTCGTCCTCATCATTATTGCCATTGCCCTGGGCGTCGGTCTCGGCATCT
GTCTAACGGGCAATCGATGCGGTAGCAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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