© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6777 |
| Gene name | |
| Location | Contig_727:3996..4528 |
| Strand | - |
| Gene length (bp) | 532 |
| Transcript length (bp) | 342 |
| Coding sequence length (bp) | 342 |
| Protein length (aa) | 114 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 6.1E-07 | 5 | 67 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.5E-07 | 31 | 100 |
| PF13606 | Ank_3 | Ankyrin repeat | 6.1E-04 | 35 | 64 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.7E-07 | 39 | 91 |
| PF00023 | Ank | Ankyrin repeat | 1.8E-02 | 70 | 98 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P50086|PSD10_YEAST | Probable 26S proteasome regulatory subunit p28 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAS6 PE=1 SV=1 | 8 | 90 | 6.0E-10 |
| sp|Q10311|YD58_SCHPO | Ankyrin repeat-containing protein C6C3.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6C3.08 PE=3 SV=1 | 21 | 77 | 6.0E-07 |
| sp|Q8N283|ANR35_HUMAN | Ankyrin repeat domain-containing protein 35 OS=Homo sapiens GN=ANKRD35 PE=2 SV=2 | 33 | 98 | 3.0E-06 |
| sp|Q54HW1|PSD10_DICDI | 26S proteasome non-ATPase regulatory subunit 10 OS=Dictyostelium discoideum GN=psmD10 PE=2 SV=1 | 29 | 92 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6777 MDQDTDRFPLHTAAREGNPNSVQTDPSLAKSKDADGRYPIHWAASSNCHAIALVLANERGFDPDVQDASGWTPLM ISASIADSEPMLRLFLQKDANVDEKSMSTMANPSSYNM* |
| Coding | >OphauG2|6777 ATGGACCAGGACACTGATCGCTTTCCCCTTCACACAGCGGCTCGCGAGGGCAACCCCAACAGTGTACAGACGGAT CCCAGTCTGGCCAAAAGTAAAGATGCCGACGGCCGCTATCCCATTCACTGGGCCGCCTCGTCAAATTGCCACGCC ATTGCCCTCGTGCTCGCCAACGAGCGCGGCTTCGACCCCGATGTTCAGGATGCCAGTGGCTGGACGCCTCTCATG ATTTCTGCCAGCATCGCAGACAGTGAGCCGATGCTGCGCCTCTTCCTCCAAAAGGATGCCAATGTCGACGAAAAG AGTATGTCTACAATGGCCAACCCATCTTCCTACAACATGTAA |
| Transcript | >OphauG2|6777 ATGGACCAGGACACTGATCGCTTTCCCCTTCACACAGCGGCTCGCGAGGGCAACCCCAACAGTGTACAGACGGAT CCCAGTCTGGCCAAAAGTAAAGATGCCGACGGCCGCTATCCCATTCACTGGGCCGCCTCGTCAAATTGCCACGCC ATTGCCCTCGTGCTCGCCAACGAGCGCGGCTTCGACCCCGATGTTCAGGATGCCAGTGGCTGGACGCCTCTCATG ATTTCTGCCAGCATCGCAGACAGTGAGCCGATGCTGCGCCTCTTCCTCCAAAAGGATGCCAATGTCGACGAAAAG AGTATGTCTACAATGGCCAACCCATCTTCCTACAACATGTAA |
| Gene | >OphauG2|6777 ATGGACCAGGACACTGATCGCTTTCCCCTTCACACAGCGGCTCGCGAGGGCAACCGTGAGCTTTGAGTCCAGCCA TCCAACCAAGCAGGCTAACAAGCTGCAGTTCCCAAAGCCGAGGGCCTTGTCAAAGTGAATATGACCTCTTGAAGA TGATTTCTTCTTGTCAAACACCAAAGATGATGCAAATTAAGCCAACAGTGTACAGACGGATCCCAGTCTGGCCAA AAGTAAAGATGCCGACGGCCGCTATCCCATTCACTGGGCCGCCTCGTCAAATTGCCACGCCATTGCCCTCGTGCT CGCCAACGAGCGCGGCTTCGACCCCGATGTTCAGGTAGCTTGGTTGGCTCTCGTTGCAATTCTCACCCTATCCTC ATGACGAAAACAGGATGCCAGTGGCTGGACGCCTCTCATGATTTCTGCCAGCATCGCAGACAGTGAGCCGATGCT GCGCCTCTTCCTCCAAAAGGATGCCAATGTCGACGAAAAGAGTATGTCTACAATGGCCAACCCATCTTCCTACAA CATGTAA |