© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6769 |
| Gene name | |
| Location | Contig_724:258..1067 |
| Strand | - |
| Gene length (bp) | 809 |
| Transcript length (bp) | 693 |
| Coding sequence length (bp) | 693 |
| Protein length (aa) | 231 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.3E-12 | 61 | 170 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 45 | 170 | 3.0E-18 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 45 | 170 | 2.0E-17 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 46 | 164 | 3.0E-16 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 15 | 165 | 2.0E-15 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 46 | 170 | 2.0E-15 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 45 | 170 | 3.0E-18 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 45 | 170 | 2.0E-17 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 46 | 164 | 3.0E-16 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 15 | 165 | 2.0E-15 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 46 | 170 | 2.0E-15 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 21 | 170 | 2.0E-14 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 41 | 173 | 3.0E-14 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 46 | 169 | 2.0E-13 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 46 | 164 | 2.0E-13 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 18 | 217 | 4.0E-13 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 45 | 170 | 1.0E-12 |
| sp|P39398|LGOT_ECOLI | Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 | 17 | 187 | 7.0E-11 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 45 | 170 | 2.0E-10 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 46 | 170 | 6.0E-10 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 18 | 169 | 1.0E-09 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 15 | 170 | 2.0E-09 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 46 | 200 | 2.0E-09 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 46 | 165 | 9.0E-09 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 51 | 165 | 4.0E-08 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 38 | 164 | 3.0E-07 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 47 | 170 | 1.0E-06 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 46 | 175 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 57 | 79 | 22 |
| 2 | 94 | 116 | 22 |
| 3 | 129 | 151 | 22 |
| 4 | 161 | 183 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6769 MDSNDNGIKSASALHGVEKHNVESLEDTESAPAQTGMAPGHRAAVEKRLKRKLDARCTLFVLIYILNYLDRNNIA AARLKGLQSDLHMTDTQYATCLSILYVGYILMQVPSNMVVNRISRPSLYISVSMLLWGLISTMSGVVKSFGAMVA VRFCLGFVEAAFLPGALLILRGFGACGVAVAVLDRGRGDNGDGAGGGVYIAGPAAQCEGVYRGGEAGGAVEDDGG RGRGG* |
| Coding | >OphauG2|6769 ATGGACAGCAATGACAATGGCATCAAGTCTGCTTCAGCGTTACACGGAGTTGAAAAGCACAATGTCGAGAGCTTG GAAGACACAGAATCAGCGCCGGCGCAGACCGGGATGGCGCCCGGGCACCGGGCCGCAGTGGAAAAGCGGCTGAAG CGCAAGCTGGACGCGCGGTGCACGCTCTTTGTGCTGATTTACATCCTCAACTACCTGGACCGAAACAACATTGCG GCGGCGCGGCTCAAGGGGCTGCAGTCGGATCTGCACATGACGGACACGCAGTACGCGACGTGTCTGAGTATTTTA TACGTGGGCTATATCCTGATGCAGGTCCCGTCCAACATGGTTGTGAACCGCATCTCACGGCCGTCGCTGTACATA TCCGTGTCGATGCTGCTCTGGGGCCTGATTTCGACCATGTCGGGCGTGGTGAAGAGTTTCGGGGCCATGGTGGCG GTGCGGTTTTGTCTGGGGTTTGTCGAGGCGGCGTTTCTGCCGGGCGCGCTGCTGATTCTGAGGGGTTTTGGGGCA TGCGGCGTGGCGGTGGCTGTTTTGGATCGAGGGCGCGGCGACAATGGCGACGGCGCTGGCGGCGGCGTTTATATT GCCGGACCTGCCGCGCAATGCGAGGGGGTTTACAGAGGAGGAGAGGCTGGTGGCGCAGTTGAGGATGACGGAGGA CGTGGGCGAGGCGGATAG |
| Transcript | >OphauG2|6769 ATGGACAGCAATGACAATGGCATCAAGTCTGCTTCAGCGTTACACGGAGTTGAAAAGCACAATGTCGAGAGCTTG GAAGACACAGAATCAGCGCCGGCGCAGACCGGGATGGCGCCCGGGCACCGGGCCGCAGTGGAAAAGCGGCTGAAG CGCAAGCTGGACGCGCGGTGCACGCTCTTTGTGCTGATTTACATCCTCAACTACCTGGACCGAAACAACATTGCG GCGGCGCGGCTCAAGGGGCTGCAGTCGGATCTGCACATGACGGACACGCAGTACGCGACGTGTCTGAGTATTTTA TACGTGGGCTATATCCTGATGCAGGTCCCGTCCAACATGGTTGTGAACCGCATCTCACGGCCGTCGCTGTACATA TCCGTGTCGATGCTGCTCTGGGGCCTGATTTCGACCATGTCGGGCGTGGTGAAGAGTTTCGGGGCCATGGTGGCG GTGCGGTTTTGTCTGGGGTTTGTCGAGGCGGCGTTTCTGCCGGGCGCGCTGCTGATTCTGAGGGGTTTTGGGGCA TGCGGCGTGGCGGTGGCTGTTTTGGATCGAGGGCGCGGCGACAATGGCGACGGCGCTGGCGGCGGCGTTTATATT GCCGGACCTGCCGCGCAATGCGAGGGGGTTTACAGAGGAGGAGAGGCTGGTGGCGCAGTTGAGGATGACGGAGGA CGTGGGCGAGGCGGATAG |
| Gene | >OphauG2|6769 ATGGACAGCAATGACAATGGCATCAAGTCTGCTTCAGCGTTACACGGAGTTGAAAAGCACAATGTCGAGAGCTTG GAAGACACAGAATCAGCGCCGGCGCAGACCGGGATGGCGCCCGGGCACCGGGCCGCAGTGGAAAAGCGGCTGAAG CGCAAGCTGGACGCGCGGTGCACGCTCTTTGTGCTGATTTACATCCTCAACTACCTGGACCGAAACAACATTGCG GCGGCGCGGCTCAAGGGGCTGCAGTCGGATCTGCACATGACGGACACGCAGTACGCGACGTGTCTGAGTATTTTA TACGTGGGCTATATCCTGATGCAGGTCCCGTCCAACATGGTTGTGAACCGCATCTCACGGCCGTCGCTGTACATA TCCGTGTCGATGCTGCTCTGGGGCCTGATTTCGACCATGTCGGGCGTGGTGAAGAGTTTCGGGGCCATGGTGGCG GTGCGGTTTTGTCTGGGGTTTGTCGAGGCGGCGTTTCTGCCGGGCGCGCTGCTGATTCTGAGTAAATGGTATACG CGGCGGGAGCTGACGACGCGGAATGCGGTGCTGTTTTGCGGGGGGTTGATTTCGAATGCCTTTTCGGCCTTGATT GGCGCGGGCGTCTTGTCGAACATGCAGGGGGTTTTGGGGCATGCGGCGTGGCGGTGGCTGTTTTGGATCGAGGGC GCGGCGACAATGGCGACGGCGCTGGCGGCGGCGTTTATATTGCCGGACCTGCCGCGCAATGCGAGGGGGTTTACA GAGGAGGAGAGGCTGGTGGCGCAGTTGAGGATGACGGAGGACGTGGGCGAGGCGGATAG |