Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6735
Gene name
LocationContig_718:5903..7377
Strand-
Gene length (bp)1474
Transcript length (bp)1359
Coding sequence length (bp)1359
Protein length (aa) 453

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00494 SQS_PSY Squalene/phytoene synthase 6.0E-37 38 313

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7S4Z6|FDFT_NEUCR Probable squalene synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erg-6 PE=3 SV=1 10 440 0.0E+00
sp|P36596|FDFT_SCHPO Squalene synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg9 PE=1 SV=1 10 372 2.0E-127
sp|Q9Y753|FDFT_YARLI Squalene synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SQS1 PE=3 SV=1 7 425 6.0E-127
sp|O74165|FDFT_CYBJA Squalene synthase OS=Cyberlindnera jadinii GN=ERG9 PE=3 SV=1 10 407 1.0E-114
sp|P29704|FDFT_YEAST Squalene synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG9 PE=1 SV=2 23 419 2.0E-110
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Swissprot ID Swissprot Description Start End E-value
sp|Q7S4Z6|FDFT_NEUCR Probable squalene synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erg-6 PE=3 SV=1 10 440 0.0E+00
sp|P36596|FDFT_SCHPO Squalene synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg9 PE=1 SV=1 10 372 2.0E-127
sp|Q9Y753|FDFT_YARLI Squalene synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SQS1 PE=3 SV=1 7 425 6.0E-127
sp|O74165|FDFT_CYBJA Squalene synthase OS=Cyberlindnera jadinii GN=ERG9 PE=3 SV=1 10 407 1.0E-114
sp|P29704|FDFT_YEAST Squalene synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG9 PE=1 SV=2 23 419 2.0E-110
sp|P78589|FDFT_CANAX Squalene synthase OS=Candida albicans GN=ERG9 PE=3 SV=1 12 414 5.0E-108
sp|Q752X9|FDFT_ASHGO Squalene synthase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG9 PE=3 SV=1 10 392 1.0E-105
sp|Q92459|FDFT_USTMA Squalene synthase OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ERG9 PE=3 SV=2 6 370 7.0E-102
sp|Q9HGZ6|FDFT_CANGA Squalene synthase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG9 PE=3 SV=2 10 374 2.0E-101
sp|P53798|FDFT_MOUSE Squalene synthase OS=Mus musculus GN=Fdft1 PE=1 SV=2 20 350 5.0E-95
sp|P37268|FDFT_HUMAN Squalene synthase OS=Homo sapiens GN=FDFT1 PE=1 SV=1 20 374 7.0E-93
sp|Q5R6U3|FDFT_PONAB Squalene synthase OS=Pongo abelii GN=FDFT1 PE=2 SV=1 20 374 7.0E-93
sp|Q32KR6|FDFT_BOVIN Squalene synthase OS=Bos taurus GN=FDFT1 PE=2 SV=1 20 390 1.0E-92
sp|Q02769|FDFT_RAT Squalene synthase OS=Rattus norvegicus GN=Fdft1 PE=2 SV=1 20 350 1.0E-91
sp|P53799|FDFT_ARATH Squalene synthase OS=Arabidopsis thaliana GN=SQS1 PE=1 SV=1 31 410 1.0E-76
sp|Q9SDW9|BSS_BOTBR Squalene synthase OS=Botryococcus braunii GN=BSS PE=1 SV=1 31 343 1.0E-75
sp|P53800|FDFT_NICBE Squalene synthase OS=Nicotiana benthamiana PE=2 SV=1 31 393 1.0E-75
sp|Q54DR1|FDFT_DICDI Squalene synthase OS=Dictyostelium discoideum GN=fdfT PE=3 SV=1 31 350 9.0E-69
sp|G0Y287|BOSS_BOTBR Botryococcus squalene synthase OS=Botryococcus braunii GN=SSL-2 PE=1 SV=1 22 343 1.0E-61
sp|G0Y288|BOCS_BOTBR Botryococcene synthase OS=Botryococcus braunii GN=SSL-3 PE=2 SV=1 17 382 6.0E-61
sp|G0Y286|PSDS_BOTBR Presqualene diphosphate synthase OS=Botryococcus braunii GN=SSL-1 PE=1 SV=1 31 330 6.0E-51
sp|Q4L976|CRTM_STAHJ Dehydrosqualene synthase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=crtM PE=3 SV=1 21 227 2.0E-07
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GO

GO Term Description Terminal node
GO:0009058 biosynthetic process Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 397 419 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3240
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6735 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|7857
Ophiocordyceps camponoti-floridani Ophcf2|02377
Ophiocordyceps camponoti-rufipedis Ophun1|4676
Ophiocordyceps kimflemingae Ophio5|6281
Ophiocordyceps subramaniannii Hirsu2|5871

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6735
MLTQDLIFRKLWHDPVHTRDLSSESETLKECYRLLNMTSRSFASVIQELTSEIRAPVVLFYLVLRGLDTIEDDMA
MPIDKKVSILCNFYKTMEVDGWQFHESKEKDRELLEKFDVVITELKKIKKPYYDIIHDLTQKMGKGMADYAQNTD
VIENGVQTVKDYELYCHYVAGLVGEGLTRLFVVSELANPKLSERPNLTESMGQFLQKTNIIRDIHEDWQDGRRWY
PKEIWSKYVDRWEDLFNVKYRDQAMNCISEMVLDALKHAEECLFYMAAMREQSIFNFVAIPQTMAIATLELTFRN
PAVLERNVKITKGDACQIMMESTQNLFTVCEVYRRYSRRIHAKNDPRDPNFLDISTRCAKIEQFIETLYPRQDPK
ILSAENAKRQREEPISDPGEGLLMFGIVTLCLIFISAIMLGTAWAMGAKFPAISDLFSESKTATVIPEAGPLGRD
EL*
Coding >OphauG2|6735
ATGCTAACCCAAGACTTGATATTCAGGAAGCTCTGGCACGACCCCGTACACACGCGTGACCTCTCGAGCGAGTCT
GAGACGCTCAAGGAATGCTACCGCTTACTCAACATGACTAGTCGTAGCTTTGCCTCGGTGATACAGGAGCTCACA
AGTGAAATTCGCGCTCCAGTCGTCCTCTTCTATCTGGTCCTGCGCGGCCTTGATACTATTGAAGATGACATGGCT
ATGCCTATCGACAAGAAGGTCTCAATCTTGTGCAACTTCTACAAGACCATGGAAGTGGATGGCTGGCAATTCCAC
GAAAGCAAGGAAAAGGACCGCGAACTCTTGGAGAAGTTTGATGTTGTCATAACAGAACTCAAAAAGATCAAGAAG
CCTTACTACGACATCATACATGACCTGACACAAAAAATGGGTAAAGGAATGGCCGACTATGCACAGAACACAGAC
GTTATTGAAAATGGCGTTCAAACCGTTAAAGACTACGAGCTCTACTGCCACTACGTTGCAGGCCTCGTTGGTGAA
GGGTTGACGCGGTTATTTGTCGTATCAGAGCTAGCCAACCCCAAGCTTTCTGAGCGTCCAAATTTGACAGAGTCT
ATGGGCCAATTTCTACAAAAGACCAACATCATTCGCGATATTCACGAAGACTGGCAAGACGGCAGACGATGGTAC
CCAAAGGAGATTTGGAGCAAATACGTCGACCGCTGGGAGGATTTGTTCAATGTCAAGTATCGCGATCAAGCCATG
AACTGCATTTCAGAAATGGTCCTCGATGCGCTAAAACACGCTGAGGAATGCCTCTTTTACATGGCAGCCATGCGG
GAACAAAGCATCTTCAACTTTGTCGCCATTCCCCAGACCATGGCAATTGCCACGCTCGAGCTTACATTTCGCAAT
CCAGCCGTGCTTGAGAGAAACGTCAAGATTACCAAAGGCGATGCTTGTCAGATAATGATGGAGTCAACCCAAAAT
CTTTTCACAGTCTGTGAAGTTTACCGGCGGTACAGTCGACGTATCCATGCCAAGAACGATCCTCGGGATCCCAAT
TTTCTCGATATAAGCACACGATGTGCCAAAATTGAACAGTTCATCGAGACGCTATATCCTAGACAGGATCCCAAG
ATACTCTCCGCTGAGAATGCAAAGCGACAGAGAGAGGAGCCTATATCAGATCCAGGTGAAGGTTTACTCATGTTT
GGAATTGTCACGCTCTGTCTCATCTTTATTTCTGCCATCATGCTCGGAACAGCTTGGGCCATGGGGGCCAAGTTT
CCTGCCATTTCTGATCTCTTCAGCGAGTCCAAGACGGCGACGGTGATACCAGAAGCAGGTCCTCTAGGGCGCGAT
GAACTTTAG
Transcript >OphauG2|6735
ATGCTAACCCAAGACTTGATATTCAGGAAGCTCTGGCACGACCCCGTACACACGCGTGACCTCTCGAGCGAGTCT
GAGACGCTCAAGGAATGCTACCGCTTACTCAACATGACTAGTCGTAGCTTTGCCTCGGTGATACAGGAGCTCACA
AGTGAAATTCGCGCTCCAGTCGTCCTCTTCTATCTGGTCCTGCGCGGCCTTGATACTATTGAAGATGACATGGCT
ATGCCTATCGACAAGAAGGTCTCAATCTTGTGCAACTTCTACAAGACCATGGAAGTGGATGGCTGGCAATTCCAC
GAAAGCAAGGAAAAGGACCGCGAACTCTTGGAGAAGTTTGATGTTGTCATAACAGAACTCAAAAAGATCAAGAAG
CCTTACTACGACATCATACATGACCTGACACAAAAAATGGGTAAAGGAATGGCCGACTATGCACAGAACACAGAC
GTTATTGAAAATGGCGTTCAAACCGTTAAAGACTACGAGCTCTACTGCCACTACGTTGCAGGCCTCGTTGGTGAA
GGGTTGACGCGGTTATTTGTCGTATCAGAGCTAGCCAACCCCAAGCTTTCTGAGCGTCCAAATTTGACAGAGTCT
ATGGGCCAATTTCTACAAAAGACCAACATCATTCGCGATATTCACGAAGACTGGCAAGACGGCAGACGATGGTAC
CCAAAGGAGATTTGGAGCAAATACGTCGACCGCTGGGAGGATTTGTTCAATGTCAAGTATCGCGATCAAGCCATG
AACTGCATTTCAGAAATGGTCCTCGATGCGCTAAAACACGCTGAGGAATGCCTCTTTTACATGGCAGCCATGCGG
GAACAAAGCATCTTCAACTTTGTCGCCATTCCCCAGACCATGGCAATTGCCACGCTCGAGCTTACATTTCGCAAT
CCAGCCGTGCTTGAGAGAAACGTCAAGATTACCAAAGGCGATGCTTGTCAGATAATGATGGAGTCAACCCAAAAT
CTTTTCACAGTCTGTGAAGTTTACCGGCGGTACAGTCGACGTATCCATGCCAAGAACGATCCTCGGGATCCCAAT
TTTCTCGATATAAGCACACGATGTGCCAAAATTGAACAGTTCATCGAGACGCTATATCCTAGACAGGATCCCAAG
ATACTCTCCGCTGAGAATGCAAAGCGACAGAGAGAGGAGCCTATATCAGATCCAGGTGAAGGTTTACTCATGTTT
GGAATTGTCACGCTCTGTCTCATCTTTATTTCTGCCATCATGCTCGGAACAGCTTGGGCCATGGGGGCCAAGTTT
CCTGCCATTTCTGATCTCTTCAGCGAGTCCAAGACGGCGACGGTGATACCAGAAGCAGGTCCTCTAGGGCGCGAT
GAACTTTAG
Gene >OphauG2|6735
ATGCTAACCCAAGACTTGATATTCAGGAAGCTCTGGCACGACCCCGTACACACGCGTGACCTCTCGAGCGAGTCT
GAGACGCTCAAGGAATGCTACCGCTTACTCAACATGACTAGTCGTAGCTTTGCCTCGGTGATACAGGAGCTCACA
AGTGAAATTCGCGCTCCAGTCGTCCTCTTCTATCTGGTCCTGCGCGGCCTTGATACTATTGAAGATGACATGGCT
ATGCCTATCGACAAGAAGGTCTCAATCTTGTGCAACTTCTACAAGACCATGGAAGTGGATGGCTGGCAATTCCAC
GAAAGCAAGGAAAAGGACCGCGAACTCTTGGAGAAGTTTGATGTTGTCATAACAGAACTCAAAAAGATCAAGAAG
CCTTACTACGACATCATACATGACCTGACACAAAAAATGGGTAAAGGAATGGCCGACTATGCACAGAACACAGAC
GTTATTGAAAATGGCGTTCAAACCGTTAAAGACTACGAGCTCTACTGCCACTACGTTGCAGGCCTCGTTGGTGAA
GGGTTGACGCGGTTATTTGTCGTATCAGAGCTAGCCAACCCCAAGCTTTCTGAGCGTCCAAATTTGACAGAGTCT
ATGGGCCAATTTCTACAAAAGACCAACATCATTCGCGATATTCACGAAGACTGGCAAGACGGCAGACGATGGTAC
CCAAAGGAGATTTGGAGCAAATACGTCGACCGCTGGGAGGATTTGTTCAATGTCAAGTATCGCGATCAAGCCATG
AACTGCATTTCAGAAATGGTCCTCGATGCGCTAAAACACGCTGAGGAATGCCTCTTTTACATGGCAGCCATGCGG
GAACAAAGCATCTTCAACTTTGTCGCCATTCCCCAGACCATGGCAATTGCCACGCTCGAGCTTACATTTCGCAAT
CCAGCCGTGCTTGAGAGAAACGTCAAGATTACCAAAGGCGATGCTTGTCAGATAATGATGGAGTCAACCCAAAAT
CTTTTCACAGTCTGTGAAGTTTACCGGCGGTACAGTCGACGTATCCATGCCAAGAACGATCCTCGGGATCCCAAT
TTTCTCGATATAAGCACACGATGTGCCAAAGTATGCATCTTGAAGCCTTTTCATCTGTGCGTTCTGCTGACGCCG
CCACACAGATTGAACAGTTCATCGAGACGCTATATCCTAGACAGGATCCCAAGATACTCTCCGCTGAGAATGCAA
AGCGACAGAGAGAGGAGCCTATATCAGATCCAGGTGAAGGTTTACTCATGTTTGGAATTGTCACGCTCTGTCTCA
TCTTTATTTCTGCCATCATGGTAAGTGAAACCAACTGTTGCTGCATGTCTCAACTCATGTCTGACAACATGATGT
TTGCTAGCTCGGAACAGCTTGGGCCATGGGGGCCAAGTTTCCTGCCATTTCTGATCTCTTCAGCGAGTCCAAGAC
GGCGACGGTGATACCAGAAGCAGGTCCTCTAGGGCGCGATGAACTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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