© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|6719 |
| Gene name | |
| Location | Contig_713:121..1949 |
| Strand | - |
| Gene length (bp) | 1828 |
| Transcript length (bp) | 1710 |
| Coding sequence length (bp) | 1710 |
| Protein length (aa) | 570 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06011 | TRP | Transient receptor potential (TRP) ion channel | 1.3E-136 | 47 | 498 |
| PF14558 | TRP_N | ML-like domain | 1.8E-08 | 2 | 41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P39719|FLC2_YEAST | Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2 | 3 | 541 | 3.0E-28 |
| sp|P53121|FLC3_YEAST | Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1 | 2 | 540 | 2.0E-21 |
| sp|Q08967|FLC1_YEAST | Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1 | 1 | 499 | 3.0E-21 |
| sp|Q08844|YO365_YEAST | Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1 | 2 | 506 | 6.0E-17 |
| sp|Q09917|PKD2_SCHPO | TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1 | 2 | 552 | 4.0E-16 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P39719|FLC2_YEAST | Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2 | 3 | 541 | 3.0E-28 |
| sp|P53121|FLC3_YEAST | Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1 | 2 | 540 | 2.0E-21 |
| sp|Q08967|FLC1_YEAST | Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1 | 1 | 499 | 3.0E-21 |
| sp|Q08844|YO365_YEAST | Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1 | 2 | 506 | 6.0E-17 |
| sp|Q09917|PKD2_SCHPO | TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1 | 2 | 552 | 4.0E-16 |
| sp|O74520|YCPE_SCHPO | Uncharacterized membrane protein C663.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.14c PE=3 SV=2 | 1 | 484 | 2.0E-10 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 226 | 248 | 22 |
| 2 | 268 | 290 | 22 |
| 3 | 305 | 327 | 22 |
| 4 | 363 | 384 | 21 |
| 5 | 388 | 410 | 22 |
| 6 | 417 | 439 | 22 |
| 7 | 454 | 476 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6719 MVPPIAFQVPDIAAQATLELKSLDDKSNVACIQSQVSNGKTANVPVVGYVVASFVGVAMVGTGISSAATALSGAG SGAVGSPSPSITETFTWVQTMAMTGMSSVNYPLVCRRFFANVGFAVGIVSWQDLQRAIDNVRAKTGGNLTEDSVD YLHNATLVFPDNSTTNSHHGSLRVKRGLDAFASLVARQAAADKSDPTSVTFQHAVKGIQAYAEQLSVPKSNVFMT ALLIVAIAIAAIVVGILLVKVVLEFWALFGSFPKSLAGFRKHYWGSIARTITSLILVLYGIWVLYCIYQFTHGDS WAAKTLAGVTLAIFTAVLAFFTYKIWSIARRLKNDVGDASGLYYDKDTWVKYSLFYESYKRDYWWLFIPAIVYMF AKGCVLALGDGHGMIQSIAQLSIESVMLILLLWSRPYERKSGNVINIVIAVVRVLSIVCVLVFVEEFGIRQTTQT VAGVVLIVIQSTLTGVLAILIIWNAVNACCKANPHRKRRKELEKDNRESDLLTPLDARNSLLRSHSRTGALTPAF SVTSDYKEKSAHRPNTPERYLAEYSDAGHQSPPSGAGGGAAPAG* |
| Coding | >OphauG2|6719 ATGGTGCCGCCTATTGCCTTTCAAGTCCCCGACATTGCGGCTCAGGCCACGCTGGAACTCAAGAGTCTCGACGAC AAGTCCAACGTTGCCTGCATTCAGTCACAAGTGTCCAACGGCAAGACGGCCAATGTGCCCGTCGTCGGCTACGTC GTCGCCAGCTTTGTCGGAGTCGCCATGGTGGGCACCGGCATCTCGTCGGCTGCTACCGCCTTGTCGGGAGCAGGG AGCGGCGCCGTGGGCAGTCCCAGCCCCAGCATTACCGAGACGTTTACCTGGGTCCAGACCATGGCCATGACGGGC ATGTCTAGCGTCAACTATCCCCTCGTCTGCCGCAGGTTTTTTGCAAATGTCGGCTTTGCCGTGGGCATCGTCTCG TGGCAAGACCTTCAGCGCGCCATTGACAATGTTCGCGCCAAAACGGGCGGCAATTTGACCGAGGACAGTGTCGAT TATCTCCACAATGCTACTCTAGTCTTTCCCGACAACTCAACCACCAACTCGCACCATGGCTCGTTGCGAGTCAAG AGAGGCCTCGATGCCTTTGCCTCTCTGGTTGCTCGCCAAGCCGCTGCCGACAAGTCGGACCCAACGTCGGTGACG TTTCAGCACGCCGTCAAGGGCATTCAGGCATATGCCGAGCAGTTGTCGGTGCCAAAGTCCAATGTCTTCATGACG GCGCTGCTCATTGTCGCCATTGCCATTGCTGCCATTGTTGTTGGCATTTTGCTTGTCAAGGTGGTGCTTGAGTTT TGGGCACTTTTTGGCAGCTTTCCCAAGTCTCTTGCCGGCTTCCGCAAACACTATTGGGGCTCCATTGCACGCACC ATTACCTCGCTCATTCTCGTCCTCTACGGCATCTGGGTCCTCTACTGCATCTATCAATTCACCCACGGCGATTCG TGGGCAGCCAAGACGCTTGCAGGCGTGACTCTGGCCATTTTCACTGCCGTGCTTGCCTTCTTCACCTACAAGATA TGGAGCATTGCTCGCCGCCTCAAGAACGACGTGGGCGACGCCAGCGGCCTCTATTACGACAAGGACACTTGGGTC AAGTACTCGCTATTTTACGAATCCTACAAGAGGGACTATTGGTGGCTCTTTATCCCAGCCATTGTCTACATGTTT GCCAAGGGCTGTGTCCTGGCCCTTGGCGACGGCCACGGCATGATTCAGTCGATTGCTCAGCTTTCCATTGAGTCT GTCATGCTGATTTTGCTGCTGTGGAGCCGCCCCTACGAGCGCAAGTCGGGCAATGTCATTAATATTGTCATTGCC GTGGTCCGCGTCCTTTCCATTGTCTGCGTCCTGGTGTTTGTCGAGGAGTTTGGCATTCGCCAGACGACGCAGACG GTGGCGGGAGTCGTTCTCATTGTTATCCAGTCAACCCTGACGGGAGTTTTGGCCATTTTGATTATTTGGAACGCC GTTAATGCTTGCTGCAAGGCGAATCCTCACCGCAAGCGCAGAAAGGAACTGGAAAAAGACAATAGGGAGTCTGAT CTCTTGACACCCTTGGATGCGCGAAACTCGCTCCTCCGCAGCCACAGCCGCACAGGCGCCCTGACGCCTGCTTTT TCAGTCACTTCAGACTACAAGGAAAAGTCTGCGCATCGTCCCAATACCCCCGAGCGCTACCTTGCCGAATACTCG GACGCGGGCCACCAGTCGCCGCCCTCTGGTGCTGGTGGTGGCGCTGCACCGGCTGGTTGA |
| Transcript | >OphauG2|6719 ATGGTGCCGCCTATTGCCTTTCAAGTCCCCGACATTGCGGCTCAGGCCACGCTGGAACTCAAGAGTCTCGACGAC AAGTCCAACGTTGCCTGCATTCAGTCACAAGTGTCCAACGGCAAGACGGCCAATGTGCCCGTCGTCGGCTACGTC GTCGCCAGCTTTGTCGGAGTCGCCATGGTGGGCACCGGCATCTCGTCGGCTGCTACCGCCTTGTCGGGAGCAGGG AGCGGCGCCGTGGGCAGTCCCAGCCCCAGCATTACCGAGACGTTTACCTGGGTCCAGACCATGGCCATGACGGGC ATGTCTAGCGTCAACTATCCCCTCGTCTGCCGCAGGTTTTTTGCAAATGTCGGCTTTGCCGTGGGCATCGTCTCG TGGCAAGACCTTCAGCGCGCCATTGACAATGTTCGCGCCAAAACGGGCGGCAATTTGACCGAGGACAGTGTCGAT TATCTCCACAATGCTACTCTAGTCTTTCCCGACAACTCAACCACCAACTCGCACCATGGCTCGTTGCGAGTCAAG AGAGGCCTCGATGCCTTTGCCTCTCTGGTTGCTCGCCAAGCCGCTGCCGACAAGTCGGACCCAACGTCGGTGACG TTTCAGCACGCCGTCAAGGGCATTCAGGCATATGCCGAGCAGTTGTCGGTGCCAAAGTCCAATGTCTTCATGACG GCGCTGCTCATTGTCGCCATTGCCATTGCTGCCATTGTTGTTGGCATTTTGCTTGTCAAGGTGGTGCTTGAGTTT TGGGCACTTTTTGGCAGCTTTCCCAAGTCTCTTGCCGGCTTCCGCAAACACTATTGGGGCTCCATTGCACGCACC ATTACCTCGCTCATTCTCGTCCTCTACGGCATCTGGGTCCTCTACTGCATCTATCAATTCACCCACGGCGATTCG TGGGCAGCCAAGACGCTTGCAGGCGTGACTCTGGCCATTTTCACTGCCGTGCTTGCCTTCTTCACCTACAAGATA TGGAGCATTGCTCGCCGCCTCAAGAACGACGTGGGCGACGCCAGCGGCCTCTATTACGACAAGGACACTTGGGTC AAGTACTCGCTATTTTACGAATCCTACAAGAGGGACTATTGGTGGCTCTTTATCCCAGCCATTGTCTACATGTTT GCCAAGGGCTGTGTCCTGGCCCTTGGCGACGGCCACGGCATGATTCAGTCGATTGCTCAGCTTTCCATTGAGTCT GTCATGCTGATTTTGCTGCTGTGGAGCCGCCCCTACGAGCGCAAGTCGGGCAATGTCATTAATATTGTCATTGCC GTGGTCCGCGTCCTTTCCATTGTCTGCGTCCTGGTGTTTGTCGAGGAGTTTGGCATTCGCCAGACGACGCAGACG GTGGCGGGAGTCGTTCTCATTGTTATCCAGTCAACCCTGACGGGAGTTTTGGCCATTTTGATTATTTGGAACGCC GTTAATGCTTGCTGCAAGGCGAATCCTCACCGCAAGCGCAGAAAGGAACTGGAAAAAGACAATAGGGAGTCTGAT CTCTTGACACCCTTGGATGCGCGAAACTCGCTCCTCCGCAGCCACAGCCGCACAGGCGCCCTGACGCCTGCTTTT TCAGTCACTTCAGACTACAAGGAAAAGTCTGCGCATCGTCCCAATACCCCCGAGCGCTACCTTGCCGAATACTCG GACGCGGGCCACCAGTCGCCGCCCTCTGGTGCTGGTGGTGGCGCTGCACCGGCTGGTTGA |
| Gene | >OphauG2|6719 ATGGTGCCGCCTATTGCCTTTCAAGTCCCCGACATTGCGGCTCAGGCCACGCTGGAACTCAAGAGTCTCGACGAC AAGTCCAACGTTGCCTGCATTCAGTCACAAGTGTCCAACGGCAAGACGGCCAATGTGCCCGTCGTCGGCTACGTC GTCGCCAGCTTTGTCGGAGTCGCCATGGTGGGCACCGGCATCTCGTCGGCTGCTACCGCCTTGTCGGGAGCAGGG AGCGGCGCCGTGGGCAGTCCCAGCCCCAGCATTACCGAGACGTTTACCTGGGTCCAGACCATGGCCATGACGGGC ATGTCTAGCGTCAACTATCCCCTCGTCTGCCGCAGGTTTTTTGCAAATGTCGGCTTTGCCGTGGGCATCGTCTCG TGGCAAGACCTTCAGCGCGCCATTGACAATGTTCGCGCCAAAACGGGCGGCAATTTGACCGAGGACAGTGTCGAT TATCTCCACAATGCTACTCTAGTCTTTCCCGACAACTCAACCACCAACTCGCACCATGGCTCGTTGCGAGTCAAG AGAGGCCTCGATGCCTTTGCCTCTCTGGTTGCTCGCCAAGCCGCTGCCGACAAGTCGGACCCAACGTCGGTGACG TTTCAGCACGCCGTCAAGGGCATTCAGGCATATGCCGAGCAGTTGTCGGTGCCAAAGTCCAATGTCTTCATGACG GCGCTGCTCATTGTCGCCATTGCCATTGCTGCCATTGTTGTTGGCATTTTGCTTGTCAAGGTGGTGCTTGAGTTT TGGGCACTTTTTGGCAGCTTTCCCAAGTCTCTTGCCGGCTTCCGCAAACACTATTGGGGCTCCATTGCACGCACC ATTACCTCGCTCATTCTCGTCCTCTACGGCATCTGGGTCCTCTACTGCATCTATCAATTCACCCACGGCGATTCG TGGGCAGCCAAGACGCTTGCAGGCGTGACTCTGGCCATTTTCACTGCCGTGCTTGCCTTCTTCACCTACAAGATA TGGAGCATTGCTCGCCGCCTCAAGAACGACGTGGGCGACGCCAGCGGCCTCTATTACGACAAGGACACTTGGGTC AAGTACTCGCTATTTTACGAATCCTACAAGAGGGACTATTGGTGGCTCTTTATCCCAGCCATTGTCTACATGTTT GCCAAGGGCTGTGTCCTGGCCCTTGGCGACGGCCACGGCATGATTCAGTCGATTGCTCAGCTTTCCATTGAGTCT GTCATGCTGATTTTGCTGCTGTGGAGCCGCCCCTACGAGCGCAAGTCGGGCAATGTCATTAATATTGTCATTGCC GTGGTCCGCGTCCTTTCCATTGTCTGCGTCCTGGTGTTTGTCGAGGAGTTTGGCATTCGCCAGACGACGCAGACG GTGGCGGGAGTCGTTCTCATTGTTATCCAGTCAACCCTGACGGGAGTTTTGGCCATTTTGATTATTTGGAACGCC GTTAATGCTTGCTGCAAGGCGAATCCTCACCGCAAGCGCAGAAAGGAACTGGGTAGGTTGCCTTTTATATTTTAT AATCCTGTTTTTATTTTGGCACCAACTAACTGTTTGGAAATGCAGAAAAAGACAATAGGGAGTCTGATCTCTTGA CACCCTTGGATGCGCGAAACTCGCTCCTCCGCAGCCACAGCCGCACAGGCGCCCTGACGCCTGCTTTTTCAGTCA CTTCAGACTACAAGGAAAAGTCTGCGCATCGTCCCAATACCCCCGAGCGCTACCTTGCCGAATACTCGGACGCGG GCCACCAGTCGCCGCCCTCTGGTGCTGGTGGTGGTGCCCAAGGCCAAATGTACTGGACCCCGACGCCGCCCACGT CTAGCGAGGCGCTGCACCGGCTGGTTGA |