© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6705 |
| Gene name | |
| Location | Contig_71:32130..33013 |
| Strand | + |
| Gene length (bp) | 883 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 1.3E-47 | 46 | 261 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 94 | 111 | 17 |
| 3 | 124 | 146 | 22 |
| 4 | 161 | 183 | 22 |
| 5 | 222 | 239 | 17 |
| 6 | 243 | 265 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6705 MNSVTTERQPLLGSAARKHRNGSAWLACTRSHLNSQVSRSWADVVLLLCYIVTGLLDSASTQVWGAFVSMQTGNT VFVGLGIASLIYPPTSPRLFRSGISLLAFCAGSFVFARFHRFFSPQRRWVLCASTAAQMMLTAIAAAIVTFAPPP PPAPTGQQDDSLHWTVLVPLALVALQSCGQAVTSRALKYNALTSVVLTSIYCDLFSDAQLFALQNVERNRRAAAP LLLLLGAIAGGLFAHSSIGIAGALWTAAVLKLAMVVLWFVWPAQADDDQD* |
| Coding | >OphauG2|6705 ATGAACTCGGTCACCACTGAGCGCCAGCCTCTGCTTGGCTCAGCTGCCCGCAAGCATCGCAATGGCTCGGCCTGG CTGGCCTGCACGCGCTCCCATCTCAACTCCCAAGTGTCGCGCTCGTGGGCCGACGTGGTGCTTCTCCTCTGCTAC ATCGTTACCGGCCTGCTGGACAGCGCGTCAACCCAAGTCTGGGGTGCTTTTGTTTCCATGCAGACCGGAAACACC GTCTTTGTCGGCCTCGGCATTGCCTCGCTCATCTATCCGCCGACATCGCCGCGCCTCTTCCGCTCAGGCATCTCG CTGCTTGCATTCTGCGCCGGCTCCTTTGTCTTTGCCCGCTTCCACCGTTTCTTCTCGCCCCAGCGCCGCTGGGTT CTGTGCGCCTCGACTGCTGCCCAGATGATGCTGACTGCAATTGCTGCCGCCATTGTCACCTTTGCGCCGCCCCCG CCTCCCGCGCCCACTGGCCAGCAAGACGACTCTCTTCACTGGACCGTCCTCGTCCCCCTTGCCCTTGTTGCGCTT CAGAGCTGTGGCCAGGCCGTCACCAGCCGCGCCCTCAAGTACAATGCCCTGACGAGCGTGGTTCTGACCAGCATC TACTGCGACTTGTTTTCCGATGCCCAGCTTTTTGCCCTGCAAAACGTCGAGCGTAACCGCCGCGCTGCTGCTCCT TTGCTGCTCCTGCTTGGAGCCATTGCTGGCGGCTTGTTTGCCCATAGCTCCATCGGTATAGCCGGAGCCCTGTGG ACAGCTGCCGTCCTCAAGCTGGCCATGGTTGTCTTGTGGTTTGTTTGGCCAGCCCAAGCCGACGACGACCAAGAC TAG |
| Transcript | >OphauG2|6705 ATGAACTCGGTCACCACTGAGCGCCAGCCTCTGCTTGGCTCAGCTGCCCGCAAGCATCGCAATGGCTCGGCCTGG CTGGCCTGCACGCGCTCCCATCTCAACTCCCAAGTGTCGCGCTCGTGGGCCGACGTGGTGCTTCTCCTCTGCTAC ATCGTTACCGGCCTGCTGGACAGCGCGTCAACCCAAGTCTGGGGTGCTTTTGTTTCCATGCAGACCGGAAACACC GTCTTTGTCGGCCTCGGCATTGCCTCGCTCATCTATCCGCCGACATCGCCGCGCCTCTTCCGCTCAGGCATCTCG CTGCTTGCATTCTGCGCCGGCTCCTTTGTCTTTGCCCGCTTCCACCGTTTCTTCTCGCCCCAGCGCCGCTGGGTT CTGTGCGCCTCGACTGCTGCCCAGATGATGCTGACTGCAATTGCTGCCGCCATTGTCACCTTTGCGCCGCCCCCG CCTCCCGCGCCCACTGGCCAGCAAGACGACTCTCTTCACTGGACCGTCCTCGTCCCCCTTGCCCTTGTTGCGCTT CAGAGCTGTGGCCAGGCCGTCACCAGCCGCGCCCTCAAGTACAATGCCCTGACGAGCGTGGTTCTGACCAGCATC TACTGCGACTTGTTTTCCGATGCCCAGCTTTTTGCCCTGCAAAACGTCGAGCGTAACCGCCGCGCTGCTGCTCCT TTGCTGCTCCTGCTTGGAGCCATTGCTGGCGGCTTGTTTGCCCATAGCTCCATCGGTATAGCCGGAGCCCTGTGG ACAGCTGCCGTCCTCAAGCTGGCCATGGTTGTCTTGTGGTTTGTTTGGCCAGCCCAAGCCGACGACGACCAAGAC TAG |
| Gene | >OphauG2|6705 ATGAACTCGGTCACCACTGAGCGCCAGCCTCTGCTTGGCTCAGCTGCCCGCAAGCATCGCAATGGCTCGGCCTGG CTGGCCTGCACGCGCTCCCATCTCAACTCCCAAGTGTCGCGCTCGTGGGCCGACGTGGTGCTTCTCCTCTGCTAC ATCGTTACCGGCCTGCTGGACAGCGCGTCAACCCAAGTCTGGGGTGCTTTTGTTTCCATGCAGACCGGTCAGCCA GCGTCAGCGTTACACGGCATGCACATGGCCCGGCTGACTCGATGCAGGAAACACCGTCTTTGTCGGCCTCGGCAT TGCCTCGCTCATCTATCCGCCGACATCGCCGCGCCTCTTCCGCTCAGGCATCTCGCTGCTTGCATTCTGCGCCGG CTCCTTTGTCTTTGCCCGCTTCCACCGTTTCTTCTCGCCCCAGCGCCGCTGGGTTCTGTGCGCCTCGACTGCTGC CCAGATGATGCTGACTGCAATTGCTGCCGCCATTGTCACCTTTGCGCCGCCCCCGCCTCCCGCGCCCACTGGCCA GCAAGACGACTCTCTTCACTGGACCGTCCTCGTCCCCCTTGCCCTTGTTGCGCTTCAGAGCTGTGGCCAGGCCGT CACCAGCCGCGCCCTCAAGTACAATGCCCTGACGAGCGTGGTTCTGACCAGCATCTACTGCGACTTGTTTTCCGA TGCCCAGCTTTTTGCCCTGCAAAACGTCGAGCGTAACCGCCGCGCTGCTGCTCCTTTGCTGCTCCTGCTTGGAGC CATTGCTGGCGGCTTGTTTGCCCATAGCTCCATCGGTATAGCCGGAGCCCTGTGGACAGCTGCCGTCCTCAAGCT GGCCATGGTTGTCTTGTGGTTTGTTTGGCCAGCCCAAGCCGACGACGACCAAGACTAG |