Protein ID | OphauG2|6678 |
Gene name | |
Location | Contig_706:4457..5991 |
Strand | - |
Gene length (bp) | 1534 |
Transcript length (bp) | 1302 |
Coding sequence length (bp) | 1302 |
Protein length (aa) | 434 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 6.1E-14 | 78 | 239 |
PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 3.8E-15 | 276 | 417 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q39254|CAX2_ARATH | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 | 58 | 428 | 2.0E-52 |
sp|Q6K1C4|CAX3_ORYSJ | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 | 14 | 428 | 3.0E-52 |
sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 38 | 432 | 4.0E-52 |
sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 58 | 428 | 2.0E-51 |
sp|Q5KQN0|CAX2_ORYSJ | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 | 10 | 428 | 8.0E-51 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q39254|CAX2_ARATH | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 | 58 | 428 | 2.0E-52 |
sp|Q6K1C4|CAX3_ORYSJ | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 | 14 | 428 | 3.0E-52 |
sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 38 | 432 | 4.0E-52 |
sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 58 | 428 | 2.0E-51 |
sp|Q5KQN0|CAX2_ORYSJ | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 | 10 | 428 | 8.0E-51 |
sp|Q945S5|CAX4_ARATH | Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 | 59 | 425 | 3.0E-49 |
sp|Q9LFZ8|CAX6_ARATH | Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 | 2 | 423 | 4.0E-48 |
sp|Q75XW3|CAX_APHHA | Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 | 78 | 424 | 7.0E-47 |
sp|Q39253|CAX1_ARATH | Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 | 59 | 427 | 3.0E-46 |
sp|Q6YXZ1|CAX4_ORYSJ | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 | 58 | 427 | 1.0E-45 |
sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 54 | 422 | 9.0E-45 |
sp|P74072|CAX_SYNY3 | Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 | 51 | 422 | 4.0E-42 |
sp|Q769E5|CAX1A_ORYSJ | Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 | 6 | 429 | 2.0E-40 |
sp|Q5TKG3|CAX1B_ORYSJ | Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 | 62 | 415 | 2.0E-40 |
sp|Q93Z81|CAX3_ARATH | Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 | 62 | 430 | 4.0E-38 |
sp|Q5KTQ9|CAX1C_ORYSJ | Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 | 60 | 425 | 2.0E-32 |
sp|O34840|CHAA_BACSU | Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 | 108 | 418 | 1.0E-26 |
sp|P42839|VNX1_YEAST | Low affinity vacuolar monovalent cation/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VNX1 PE=1 SV=1 | 76 | 419 | 4.0E-21 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
GO:0006810 | transport | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0008150 | biological_process | No |
GO:0005575 | cellular_component | No |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 79 | 98 | 19 |
2 | 110 | 132 | 22 |
3 | 142 | 164 | 22 |
4 | 177 | 199 | 22 |
5 | 219 | 238 | 19 |
6 | 275 | 297 | 22 |
7 | 374 | 393 | 19 |
8 | 400 | 419 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|6678 MVPNLLAANSPSSQPRAEKMAASATVKATGESGRRGFNPRHFFPIALRSASRASALCNVLWPVVPAALAVRYALP SHHTTIFILAYLAMVPCANLIGFAGQEFARKVPHVAGVLAEVTCGSVVEIILFIILLCKDQFMVVKAAILGSILA TMLLCLGACFFVGGLCRHEQTFSDAISEAGSGLLLTAGVVLAVPTTFRFGIPSVDSSLSQQEIDQNSQSISRAVA LLLVLSYCVYIFFQSRSHHGIYDAVFKYDEHRDDDGGRDAAKAKLTMTECIVALVVAIVLVTLISLTLVLQIEHI IESSSISDSFMGLILVPLVEKFAEHLTAIDEAWDNQINFALSHVLGATLQTALFNAPLTVIVGWGLGKPMDLDFG LFNLVMLILSILTVGRFLQDQKSNYLEGFLLIILYVAIAVSAYYTPNPPSHSDSGQTE* |
Coding | >OphauG2|6678 ATGGTTCCCAACTTGCTCGCGGCCAACAGTCCAAGCAGCCAGCCACGCGCCGAAAAGATGGCTGCCTCTGCCACG GTCAAGGCTACCGGCGAGAGCGGGCGCCGTGGCTTCAACCCGCGTCACTTTTTCCCAATTGCCCTCCGCTCTGCT AGCCGGGCCAGCGCCCTGTGCAATGTTCTTTGGCCAGTTGTGCCCGCCGCCCTGGCGGTCCGATATGCCCTGCCG AGCCACCACACAACCATCTTCATCCTCGCATACTTGGCCATGGTGCCCTGCGCCAATCTTATTGGCTTTGCCGGC CAGGAGTTTGCTCGCAAAGTTCCTCATGTCGCTGGTGTCTTGGCCGAGGTTACTTGCGGCTCCGTTGTCGAAATC ATTCTCTTTATAATTTTACTCTGCAAGGACCAATTTATGGTGGTCAAGGCGGCTATTCTCGGCTCTATCCTTGCC ACCATGCTGCTCTGTCTTGGCGCCTGCTTCTTCGTCGGCGGCTTATGTCGTCATGAGCAAACATTTAGCGATGCC ATTAGTGAAGCTGGTAGTGGTCTGCTCTTGACAGCCGGCGTCGTTCTCGCCGTGCCTACAACTTTTCGCTTTGGC ATTCCCTCAGTAGATTCCAGTCTCAGCCAGCAAGAAATCGATCAAAACTCGCAGAGCATCTCGCGTGCTGTTGCG CTGCTGCTGGTCCTATCCTATTGCGTATACATCTTTTTTCAGTCACGTTCCCATCATGGCATCTATGATGCCGTT TTCAAGTATGACGAGCACCGTGACGACGACGGCGGCAGAGACGCGGCAAAAGCCAAGCTCACCATGACCGAGTGC ATTGTCGCCCTTGTCGTGGCCATTGTGCTCGTGACTCTCATTTCCCTCACCCTTGTCTTGCAGATCGAACACATT ATTGAAAGCAGCAGCATCTCCGACTCCTTCATGGGCCTTATTCTTGTTCCTCTTGTCGAAAAGTTTGCCGAGCAC TTGACGGCCATTGACGAGGCATGGGACAACCAAATCAACTTTGCCCTTTCCCACGTTCTTGGTGCCACTCTGCAA ACAGCCCTTTTCAACGCGCCGCTGACAGTTATTGTTGGCTGGGGTCTCGGGAAGCCCATGGACCTCGACTTTGGC CTCTTCAATCTCGTCATGCTTATTCTTTCCATTCTCACTGTTGGTCGCTTCCTGCAGGACCAAAAGAGCAATTAT CTCGAAGGCTTCCTCCTCATAATCCTCTATGTTGCCATTGCCGTTTCGGCTTATTACACGCCAAATCCGCCGAGC CACAGCGACAGTGGCCAAACGGAGTAA |
Transcript | >OphauG2|6678 ATGGTTCCCAACTTGCTCGCGGCCAACAGTCCAAGCAGCCAGCCACGCGCCGAAAAGATGGCTGCCTCTGCCACG GTCAAGGCTACCGGCGAGAGCGGGCGCCGTGGCTTCAACCCGCGTCACTTTTTCCCAATTGCCCTCCGCTCTGCT AGCCGGGCCAGCGCCCTGTGCAATGTTCTTTGGCCAGTTGTGCCCGCCGCCCTGGCGGTCCGATATGCCCTGCCG AGCCACCACACAACCATCTTCATCCTCGCATACTTGGCCATGGTGCCCTGCGCCAATCTTATTGGCTTTGCCGGC CAGGAGTTTGCTCGCAAAGTTCCTCATGTCGCTGGTGTCTTGGCCGAGGTTACTTGCGGCTCCGTTGTCGAAATC ATTCTCTTTATAATTTTACTCTGCAAGGACCAATTTATGGTGGTCAAGGCGGCTATTCTCGGCTCTATCCTTGCC ACCATGCTGCTCTGTCTTGGCGCCTGCTTCTTCGTCGGCGGCTTATGTCGTCATGAGCAAACATTTAGCGATGCC ATTAGTGAAGCTGGTAGTGGTCTGCTCTTGACAGCCGGCGTCGTTCTCGCCGTGCCTACAACTTTTCGCTTTGGC ATTCCCTCAGTAGATTCCAGTCTCAGCCAGCAAGAAATCGATCAAAACTCGCAGAGCATCTCGCGTGCTGTTGCG CTGCTGCTGGTCCTATCCTATTGCGTATACATCTTTTTTCAGTCACGTTCCCATCATGGCATCTATGATGCCGTT TTCAAGTATGACGAGCACCGTGACGACGACGGCGGCAGAGACGCGGCAAAAGCCAAGCTCACCATGACCGAGTGC ATTGTCGCCCTTGTCGTGGCCATTGTGCTCGTGACTCTCATTTCCCTCACCCTTGTCTTGCAGATCGAACACATT ATTGAAAGCAGCAGCATCTCCGACTCCTTCATGGGCCTTATTCTTGTTCCTCTTGTCGAAAAGTTTGCCGAGCAC TTGACGGCCATTGACGAGGCATGGGACAACCAAATCAACTTTGCCCTTTCCCACGTTCTTGGTGCCACTCTGCAA ACAGCCCTTTTCAACGCGCCGCTGACAGTTATTGTTGGCTGGGGTCTCGGGAAGCCCATGGACCTCGACTTTGGC CTCTTCAATCTCGTCATGCTTATTCTTTCCATTCTCACTGTTGGTCGCTTCCTGCAGGACCAAAAGAGCAATTAT CTCGAAGGCTTCCTCCTCATAATCCTCTATGTTGCCATTGCCGTTTCGGCTTATTACACGCCAAATCCGCCGAGC CACAGCGACAGTGGCCAAACGGAGTAA |
Gene | >OphauG2|6678 ATGGTTCCCAACTTGCTCGCGGCCAACAGTCCAAGCAGCCAGCCACGCGCCGAAAAGATGGCTGCCTCTGCCACG GTCAAGGCTACCGGCGAGAGCGGGCGCCGTGGCTTCAACCCGCGTCACTTTTTCCCAATTGCCCTCCGCTCTGCT AGCCGGGCCAGCGCCCTGTGCAATGTTCTTTGGCCAGTTGTGCCCGCCGCCCTGGCGGTCCGATGTGCGTTGCTG CTCATGCCATGCCCATGGACAGTCAGTTGACTGACTGTTTGCCTTGTCCTGCTTGGCTTGCATCTCAGATGCCCT GCCGAGCCACCACACAACCATCTTCATCCTCGCATACTTGGCCATGGTGCCCTGCGCCAATCTTATTGGCTTTGC CGGCCAGGAGTTTGCTCGCAAAGTTCCTCATGTCGCTGGTGTCTTGGCCGAGGTTACGTGAGCCTTTGCCGCTTC TGCCATCTGCTTCCTTTTGCTGGCTTGCTTACACAGTGCTCCCTTTGCAACAGTTGCGGCTCCGTTGTCGAAATC ATTCTCTTTATAATTTTACTCTGCAAGGACCAATTTATGGTGGTCAAGGCGGCTATTCTCGGCTCTATCCTTGCC ACCATGCTGCTCTGTCTTGGCGCCTGCTTCTTCGTCGGCGGCTTATGTCGTCATGAGCAAACATTTAGCGATGCC ATTAGTGAAGCTGGTAGTGGTCTGCTCTTGACAGCGTATGTTTGTTTTCATACTTTTTCAAGCTCCTGCTTCTTC CTTCCTCTCGTGGTGGTTGATGGCTAACAAGGTGGTACATAGCGGCGTCGTTCTCGCCGTGCCTACAACTTTTCG CTTTGGCATTCCCTCAGTAGATTCCAGTCTCAGCCAGCAAGAAATCGATCAAAACTCGCAGAGCATCTCGCGTGC TGTTGCGCTGCTGCTGGTCCTATCCTATTGCGTATACATCTTTTTTCAGTCACGTTCCCATCATGGCATCTATGA TGCCGTTTTCAAGTATGACGAGCACCGTGACGACGACGGCGGCAGAGACGCGGCAAAAGCCAAGCTCACCATGAC CGAGTGCATTGTCGCCCTTGTCGTGGCCATTGTGCTCGTGACTCTCATTTCCCTCACCCTTGTCTTGCAGATCGA ACACATTATTGAAAGCAGCAGCATCTCCGACTCCTTCATGGGCCTTATTCTTGTTCCTCTTGTCGAAAAGTTTGC CGAGCACTTGACGGCCATTGACGAGGCATGGGACAACCAAATCAACTTTGCCCTTTCCCACGTTCTTGGTGCCAC TCTGCAAACAGCCCTTTTCAACGCGCCGCTGACAGTTATTGTTGGCTGGGGTCTCGGGAAGCCCATGGACCTCGA CTTTGGCCTCTTCAATCTCGTCATGCTTATTCTTTCCATTCTCACTGTTGGTCGCTTCCTGCAGGACCAAAAGAG CAATTATCTCGAAGGCTTCCTCCTCATAATCCTCTATGTTGCCATTGCCGTTTCGGCTTATTACACGCCAAATCC GCCGAGCCACAGCGACAGTGGCCAAACGGAGTAA |