Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6678
Gene name
LocationContig_706:4457..5991
Strand-
Gene length (bp)1534
Transcript length (bp)1302
Coding sequence length (bp)1302
Protein length (aa) 434

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 6.1E-14 78 239
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 3.8E-15 276 417

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 58 428 2.0E-52
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 14 428 3.0E-52
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 38 432 4.0E-52
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 58 428 2.0E-51
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 10 428 8.0E-51
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Swissprot ID Swissprot Description Start End E-value
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 58 428 2.0E-52
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 14 428 3.0E-52
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 38 432 4.0E-52
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 58 428 2.0E-51
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 10 428 8.0E-51
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 59 425 3.0E-49
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 2 423 4.0E-48
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 78 424 7.0E-47
sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 59 427 3.0E-46
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 58 427 1.0E-45
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 54 422 9.0E-45
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 51 422 4.0E-42
sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 6 429 2.0E-40
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 62 415 2.0E-40
sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 62 430 4.0E-38
sp|Q5KTQ9|CAX1C_ORYSJ Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 60 425 2.0E-32
sp|O34840|CHAA_BACSU Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 108 418 1.0E-26
sp|P42839|VNX1_YEAST Low affinity vacuolar monovalent cation/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VNX1 PE=1 SV=1 76 419 4.0E-21
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0006810 transport No
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0005575 cellular_component No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

Domain # Start End Length
1 79 98 19
2 110 132 22
3 142 164 22
4 177 199 22
5 219 238 19
6 275 297 22
7 374 393 19
8 400 419 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6678
MVPNLLAANSPSSQPRAEKMAASATVKATGESGRRGFNPRHFFPIALRSASRASALCNVLWPVVPAALAVRYALP
SHHTTIFILAYLAMVPCANLIGFAGQEFARKVPHVAGVLAEVTCGSVVEIILFIILLCKDQFMVVKAAILGSILA
TMLLCLGACFFVGGLCRHEQTFSDAISEAGSGLLLTAGVVLAVPTTFRFGIPSVDSSLSQQEIDQNSQSISRAVA
LLLVLSYCVYIFFQSRSHHGIYDAVFKYDEHRDDDGGRDAAKAKLTMTECIVALVVAIVLVTLISLTLVLQIEHI
IESSSISDSFMGLILVPLVEKFAEHLTAIDEAWDNQINFALSHVLGATLQTALFNAPLTVIVGWGLGKPMDLDFG
LFNLVMLILSILTVGRFLQDQKSNYLEGFLLIILYVAIAVSAYYTPNPPSHSDSGQTE*
Coding >OphauG2|6678
ATGGTTCCCAACTTGCTCGCGGCCAACAGTCCAAGCAGCCAGCCACGCGCCGAAAAGATGGCTGCCTCTGCCACG
GTCAAGGCTACCGGCGAGAGCGGGCGCCGTGGCTTCAACCCGCGTCACTTTTTCCCAATTGCCCTCCGCTCTGCT
AGCCGGGCCAGCGCCCTGTGCAATGTTCTTTGGCCAGTTGTGCCCGCCGCCCTGGCGGTCCGATATGCCCTGCCG
AGCCACCACACAACCATCTTCATCCTCGCATACTTGGCCATGGTGCCCTGCGCCAATCTTATTGGCTTTGCCGGC
CAGGAGTTTGCTCGCAAAGTTCCTCATGTCGCTGGTGTCTTGGCCGAGGTTACTTGCGGCTCCGTTGTCGAAATC
ATTCTCTTTATAATTTTACTCTGCAAGGACCAATTTATGGTGGTCAAGGCGGCTATTCTCGGCTCTATCCTTGCC
ACCATGCTGCTCTGTCTTGGCGCCTGCTTCTTCGTCGGCGGCTTATGTCGTCATGAGCAAACATTTAGCGATGCC
ATTAGTGAAGCTGGTAGTGGTCTGCTCTTGACAGCCGGCGTCGTTCTCGCCGTGCCTACAACTTTTCGCTTTGGC
ATTCCCTCAGTAGATTCCAGTCTCAGCCAGCAAGAAATCGATCAAAACTCGCAGAGCATCTCGCGTGCTGTTGCG
CTGCTGCTGGTCCTATCCTATTGCGTATACATCTTTTTTCAGTCACGTTCCCATCATGGCATCTATGATGCCGTT
TTCAAGTATGACGAGCACCGTGACGACGACGGCGGCAGAGACGCGGCAAAAGCCAAGCTCACCATGACCGAGTGC
ATTGTCGCCCTTGTCGTGGCCATTGTGCTCGTGACTCTCATTTCCCTCACCCTTGTCTTGCAGATCGAACACATT
ATTGAAAGCAGCAGCATCTCCGACTCCTTCATGGGCCTTATTCTTGTTCCTCTTGTCGAAAAGTTTGCCGAGCAC
TTGACGGCCATTGACGAGGCATGGGACAACCAAATCAACTTTGCCCTTTCCCACGTTCTTGGTGCCACTCTGCAA
ACAGCCCTTTTCAACGCGCCGCTGACAGTTATTGTTGGCTGGGGTCTCGGGAAGCCCATGGACCTCGACTTTGGC
CTCTTCAATCTCGTCATGCTTATTCTTTCCATTCTCACTGTTGGTCGCTTCCTGCAGGACCAAAAGAGCAATTAT
CTCGAAGGCTTCCTCCTCATAATCCTCTATGTTGCCATTGCCGTTTCGGCTTATTACACGCCAAATCCGCCGAGC
CACAGCGACAGTGGCCAAACGGAGTAA
Transcript >OphauG2|6678
ATGGTTCCCAACTTGCTCGCGGCCAACAGTCCAAGCAGCCAGCCACGCGCCGAAAAGATGGCTGCCTCTGCCACG
GTCAAGGCTACCGGCGAGAGCGGGCGCCGTGGCTTCAACCCGCGTCACTTTTTCCCAATTGCCCTCCGCTCTGCT
AGCCGGGCCAGCGCCCTGTGCAATGTTCTTTGGCCAGTTGTGCCCGCCGCCCTGGCGGTCCGATATGCCCTGCCG
AGCCACCACACAACCATCTTCATCCTCGCATACTTGGCCATGGTGCCCTGCGCCAATCTTATTGGCTTTGCCGGC
CAGGAGTTTGCTCGCAAAGTTCCTCATGTCGCTGGTGTCTTGGCCGAGGTTACTTGCGGCTCCGTTGTCGAAATC
ATTCTCTTTATAATTTTACTCTGCAAGGACCAATTTATGGTGGTCAAGGCGGCTATTCTCGGCTCTATCCTTGCC
ACCATGCTGCTCTGTCTTGGCGCCTGCTTCTTCGTCGGCGGCTTATGTCGTCATGAGCAAACATTTAGCGATGCC
ATTAGTGAAGCTGGTAGTGGTCTGCTCTTGACAGCCGGCGTCGTTCTCGCCGTGCCTACAACTTTTCGCTTTGGC
ATTCCCTCAGTAGATTCCAGTCTCAGCCAGCAAGAAATCGATCAAAACTCGCAGAGCATCTCGCGTGCTGTTGCG
CTGCTGCTGGTCCTATCCTATTGCGTATACATCTTTTTTCAGTCACGTTCCCATCATGGCATCTATGATGCCGTT
TTCAAGTATGACGAGCACCGTGACGACGACGGCGGCAGAGACGCGGCAAAAGCCAAGCTCACCATGACCGAGTGC
ATTGTCGCCCTTGTCGTGGCCATTGTGCTCGTGACTCTCATTTCCCTCACCCTTGTCTTGCAGATCGAACACATT
ATTGAAAGCAGCAGCATCTCCGACTCCTTCATGGGCCTTATTCTTGTTCCTCTTGTCGAAAAGTTTGCCGAGCAC
TTGACGGCCATTGACGAGGCATGGGACAACCAAATCAACTTTGCCCTTTCCCACGTTCTTGGTGCCACTCTGCAA
ACAGCCCTTTTCAACGCGCCGCTGACAGTTATTGTTGGCTGGGGTCTCGGGAAGCCCATGGACCTCGACTTTGGC
CTCTTCAATCTCGTCATGCTTATTCTTTCCATTCTCACTGTTGGTCGCTTCCTGCAGGACCAAAAGAGCAATTAT
CTCGAAGGCTTCCTCCTCATAATCCTCTATGTTGCCATTGCCGTTTCGGCTTATTACACGCCAAATCCGCCGAGC
CACAGCGACAGTGGCCAAACGGAGTAA
Gene >OphauG2|6678
ATGGTTCCCAACTTGCTCGCGGCCAACAGTCCAAGCAGCCAGCCACGCGCCGAAAAGATGGCTGCCTCTGCCACG
GTCAAGGCTACCGGCGAGAGCGGGCGCCGTGGCTTCAACCCGCGTCACTTTTTCCCAATTGCCCTCCGCTCTGCT
AGCCGGGCCAGCGCCCTGTGCAATGTTCTTTGGCCAGTTGTGCCCGCCGCCCTGGCGGTCCGATGTGCGTTGCTG
CTCATGCCATGCCCATGGACAGTCAGTTGACTGACTGTTTGCCTTGTCCTGCTTGGCTTGCATCTCAGATGCCCT
GCCGAGCCACCACACAACCATCTTCATCCTCGCATACTTGGCCATGGTGCCCTGCGCCAATCTTATTGGCTTTGC
CGGCCAGGAGTTTGCTCGCAAAGTTCCTCATGTCGCTGGTGTCTTGGCCGAGGTTACGTGAGCCTTTGCCGCTTC
TGCCATCTGCTTCCTTTTGCTGGCTTGCTTACACAGTGCTCCCTTTGCAACAGTTGCGGCTCCGTTGTCGAAATC
ATTCTCTTTATAATTTTACTCTGCAAGGACCAATTTATGGTGGTCAAGGCGGCTATTCTCGGCTCTATCCTTGCC
ACCATGCTGCTCTGTCTTGGCGCCTGCTTCTTCGTCGGCGGCTTATGTCGTCATGAGCAAACATTTAGCGATGCC
ATTAGTGAAGCTGGTAGTGGTCTGCTCTTGACAGCGTATGTTTGTTTTCATACTTTTTCAAGCTCCTGCTTCTTC
CTTCCTCTCGTGGTGGTTGATGGCTAACAAGGTGGTACATAGCGGCGTCGTTCTCGCCGTGCCTACAACTTTTCG
CTTTGGCATTCCCTCAGTAGATTCCAGTCTCAGCCAGCAAGAAATCGATCAAAACTCGCAGAGCATCTCGCGTGC
TGTTGCGCTGCTGCTGGTCCTATCCTATTGCGTATACATCTTTTTTCAGTCACGTTCCCATCATGGCATCTATGA
TGCCGTTTTCAAGTATGACGAGCACCGTGACGACGACGGCGGCAGAGACGCGGCAAAAGCCAAGCTCACCATGAC
CGAGTGCATTGTCGCCCTTGTCGTGGCCATTGTGCTCGTGACTCTCATTTCCCTCACCCTTGTCTTGCAGATCGA
ACACATTATTGAAAGCAGCAGCATCTCCGACTCCTTCATGGGCCTTATTCTTGTTCCTCTTGTCGAAAAGTTTGC
CGAGCACTTGACGGCCATTGACGAGGCATGGGACAACCAAATCAACTTTGCCCTTTCCCACGTTCTTGGTGCCAC
TCTGCAAACAGCCCTTTTCAACGCGCCGCTGACAGTTATTGTTGGCTGGGGTCTCGGGAAGCCCATGGACCTCGA
CTTTGGCCTCTTCAATCTCGTCATGCTTATTCTTTCCATTCTCACTGTTGGTCGCTTCCTGCAGGACCAAAAGAG
CAATTATCTCGAAGGCTTCCTCCTCATAATCCTCTATGTTGCCATTGCCGTTTCGGCTTATTACACGCCAAATCC
GCCGAGCCACAGCGACAGTGGCCAAACGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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