© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6643 |
| Gene name | |
| Location | Contig_7:74518..75459 |
| Strand | - |
| Gene length (bp) | 941 |
| Transcript length (bp) | 876 |
| Coding sequence length (bp) | 876 |
| Protein length (aa) | 292 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00722 | Glyco_hydro_16 | Glycosyl hydrolases family 16 | 1.8E-09 | 90 | 253 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P23903|E13B_BACCI | Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus circulans GN=glcA PE=1 SV=1 | 33 | 267 | 1.0E-17 |
| sp|P45798|GUB_RHOMR | Beta-glucanase OS=Rhodothermus marinus GN=bglA PE=1 SV=1 | 45 | 269 | 3.0E-10 |
| sp|Q9Z3Q2|EGLC_RHIME | Endo-1,3-1,4-beta-glycanase EglC OS=Rhizobium meliloti (strain 1021) GN=eglC PE=3 SV=2 | 59 | 242 | 5.0E-10 |
| sp|O33680|EXSH_RHIME | Endo-1,3-1,4-beta-glycanase ExsH OS=Rhizobium meliloti (strain 1021) GN=exsH PE=1 SV=1 | 72 | 253 | 5.0E-10 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6643 MPWKEHLQRVKDDLNSIVSPRHGAPPVAEKTYWQPRFHPDVGVSDEWEAKIGNGPDGWGNQELEHYTADPDNAFH TADGKLMLCAIANSEAAEADRRYTSARLVSRRTLGRDRGVVTALITAPCAPGIWPAFWLLPQEPFSWPVDGEIDI AETWNGDCEIRSCLHWGPHQEGDKHRVMGTHISDLASRPVRYDFAWDQSGREPGQGRLLWYIDGKPVMKADVPQG TRPMREMAMLLNVAMGGNVCGGKAPADGKYHMVIDMLCLAEELEGGGWKRFDSDWNSPSTPWGKGY* |
| Coding | >OphauG2|6643 ATGCCGTGGAAAGAGCATTTGCAGCGCGTCAAGGACGACCTCAACAGCATCGTCTCGCCACGACATGGGGCCCCA CCGGTGGCGGAAAAGACGTACTGGCAGCCGCGCTTCCACCCAGACGTGGGCGTGAGCGACGAGTGGGAGGCCAAG ATTGGCAACGGCCCGGATGGCTGGGGAAACCAAGAACTGGAACATTACACGGCAGACCCAGACAATGCTTTTCAC ACCGCAGATGGCAAGCTGATGCTTTGCGCCATTGCCAATAGTGAGGCAGCCGAGGCGGACAGGCGGTACACATCG GCACGGCTCGTCAGCCGGCGCACCTTGGGTCGAGACCGCGGCGTCGTGACAGCCTTGATTACGGCGCCCTGCGCC CCAGGCATCTGGCCTGCCTTTTGGCTCCTGCCCCAGGAACCCTTTTCGTGGCCCGTTGATGGCGAAATTGACATT GCTGAGACGTGGAATGGCGACTGCGAGATTCGCTCCTGTCTTCACTGGGGGCCTCACCAAGAGGGCGACAAGCAC CGCGTCATGGGCACACACATTTCCGATCTCGCAAGCCGTCCAGTGCGCTACGACTTTGCCTGGGACCAGTCCGGC CGCGAGCCCGGGCAGGGGCGCCTGCTGTGGTATATCGACGGCAAGCCCGTCATGAAGGCCGACGTGCCCCAAGGC ACGCGCCCCATGCGGGAAATGGCCATGCTGCTCAACGTGGCCATGGGAGGCAATGTATGCGGCGGCAAGGCTCCG GCAGACGGCAAATACCACATGGTCATTGACATGCTGTGTCTGGCCGAAGAGCTCGAGGGGGGAGGATGGAAGCGC TTTGACTCGGACTGGAACAGCCCGAGTACGCCATGGGGAAAAGGTTATTGA |
| Transcript | >OphauG2|6643 ATGCCGTGGAAAGAGCATTTGCAGCGCGTCAAGGACGACCTCAACAGCATCGTCTCGCCACGACATGGGGCCCCA CCGGTGGCGGAAAAGACGTACTGGCAGCCGCGCTTCCACCCAGACGTGGGCGTGAGCGACGAGTGGGAGGCCAAG ATTGGCAACGGCCCGGATGGCTGGGGAAACCAAGAACTGGAACATTACACGGCAGACCCAGACAATGCTTTTCAC ACCGCAGATGGCAAGCTGATGCTTTGCGCCATTGCCAATAGTGAGGCAGCCGAGGCGGACAGGCGGTACACATCG GCACGGCTCGTCAGCCGGCGCACCTTGGGTCGAGACCGCGGCGTCGTGACAGCCTTGATTACGGCGCCCTGCGCC CCAGGCATCTGGCCTGCCTTTTGGCTCCTGCCCCAGGAACCCTTTTCGTGGCCCGTTGATGGCGAAATTGACATT GCTGAGACGTGGAATGGCGACTGCGAGATTCGCTCCTGTCTTCACTGGGGGCCTCACCAAGAGGGCGACAAGCAC CGCGTCATGGGCACACACATTTCCGATCTCGCAAGCCGTCCAGTGCGCTACGACTTTGCCTGGGACCAGTCCGGC CGCGAGCCCGGGCAGGGGCGCCTGCTGTGGTATATCGACGGCAAGCCCGTCATGAAGGCCGACGTGCCCCAAGGC ACGCGCCCCATGCGGGAAATGGCCATGCTGCTCAACGTGGCCATGGGAGGCAATGTATGCGGCGGCAAGGCTCCG GCAGACGGCAAATACCACATGGTCATTGACATGCTGTGTCTGGCCGAAGAGCTCGAGGGGGGAGGATGGAAGCGC TTTGACTCGGACTGGAACAGCCCGAGTACGCCATGGGGAAAAGGTTATTGA |
| Gene | >OphauG2|6643 ATGCCGTGGAAAGAGCATTTGCAGCGCGTCAAGGACGACCTCAACAGCATCGTCTCGCCACGACATGGGGCCCCA CCGGTGGCGGAAAAGACGTACTGGCAGCCGCGCTTCCACCCAGACGTGGGCGTGAGCGACGAGTGGGAGGCCAAG ATTGGCAACGGCCCGGATGGCTGGGGAAACCAAGAACTGGAACATTACACGGCAGACCCAGACAATGCTTTTCAG TGGGTTTGTTGCTAGCGAGGCCCAGAGCTGTTGCTGATGCTGATGATGGATCCGGCCGTTGCAGCACCGCAGATG GCAAGCTGATGCTTTGCGCCATTGCCAATAGTGAGGCAGCCGAGGCGGACAGGCGGTACACATCGGCACGGCTCG TCAGCCGGCGCACCTTGGGTCGAGACCGCGGCGTCGTGACAGCCTTGATTACGGCGCCCTGCGCCCCAGGCATCT GGCCTGCCTTTTGGCTCCTGCCCCAGGAACCCTTTTCGTGGCCCGTTGATGGCGAAATTGACATTGCTGAGACGT GGAATGGCGACTGCGAGATTCGCTCCTGTCTTCACTGGGGGCCTCACCAAGAGGGCGACAAGCACCGCGTCATGG GCACACACATTTCCGATCTCGCAAGCCGTCCAGTGCGCTACGACTTTGCCTGGGACCAGTCCGGCCGCGAGCCCG GGCAGGGGCGCCTGCTGTGGTATATCGACGGCAAGCCCGTCATGAAGGCCGACGTGCCCCAAGGCACGCGCCCCA TGCGGGAAATGGCCATGCTGCTCAACGTGGCCATGGGAGGCAATGTATGCGGCGGCAAGGCTCCGGCAGACGGCA AATACCACATGGTCATTGACATGCTGTGTCTGGCCGAAGAGCTCGAGGGGGGAGGATGGAAGCGCTTTGACTCGG ACTGGAACAGCCCGAGTACGCCATGGGGAAAAGGTTATTGA |