© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6497 |
| Gene name | |
| Location | Contig_675:8871..9862 |
| Strand | + |
| Gene length (bp) | 991 |
| Transcript length (bp) | 822 |
| Coding sequence length (bp) | 822 |
| Protein length (aa) | 274 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20520 | Ac45-VOA1_TM | V0 complex accessory subunit Ac45/VOA1 transmembrane domain | 4.9E-16 | 223 | 262 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7R6|BIG1_SCHPO | Protein big1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=big1 PE=3 SV=1 | 201 | 261 | 2.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 225 | 247 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6497 MRLYALFGALALSTTVNSALSDSSPWLLFSTAKFQDTSNTNQVQTSSSVLKHSKEILASCPTEHYLVVSQPGVHG VELGRPGSCAMPHLCRAIDDVRVKSKFTVAEVVGHVTHPGIAQHIRESCAQKNKVATVNHVDLVSIPREGRTSAL FSNDATLATSLDAIMSTNSFTIIFYSPPGEPVYEAEFSDSLHIEMKRDMHSMPMRRKDNDSERDTRPLFEKYQFF TPGVFMGIITALILLSLLNVGIRALSSLQVPYGAFEKENGPAAHKKYQ* |
| Coding | >OphauG2|6497 ATGCGTCTATACGCACTCTTTGGCGCTTTGGCGCTGTCTACAACGGTTAATTCTGCGCTATCAGACTCAAGCCCA TGGCTCTTATTCTCCACGGCCAAGTTTCAAGACACTTCGAATACAAATCAAGTTCAGACTAGCTCATCAGTGCTA AAGCACTCCAAAGAGATTCTGGCGTCATGTCCAACGGAACACTATCTCGTTGTTTCGCAACCTGGCGTGCATGGT GTTGAGCTGGGGCGGCCGGGCAGCTGTGCGATGCCGCATCTTTGTCGTGCCATTGATGATGTGCGTGTCAAAAGC AAATTCACTGTGGCCGAGGTTGTTGGCCATGTGACACATCCAGGCATTGCGCAGCATATTCGAGAGTCTTGCGCG CAGAAGAACAAGGTGGCGACTGTCAACCATGTTGACCTGGTGTCGATTCCTCGAGAGGGCCGAACCAGTGCACTG TTTAGCAATGATGCGACGCTTGCTACTAGCTTGGATGCCATCATGTCGACCAACAGCTTCACCATCATCTTTTAC TCCCCTCCTGGCGAGCCGGTGTACGAAGCAGAGTTTAGCGATTCGCTACATATAGAAATGAAGCGCGACATGCAC TCCATGCCCATGCGGCGCAAGGACAATGACTCGGAGCGAGATACTCGTCCCCTATTCGAAAAATACCAATTCTTC ACGCCAGGTGTGTTTATGGGCATAATTACGGCCCTGATCCTGCTTTCGCTCCTCAATGTTGGCATCAGGGCTTTG TCGAGCCTTCAGGTGCCGTACGGGGCCTTTGAGAAGGAGAATGGACCGGCTGCCCACAAGAAATATCAGTGA |
| Transcript | >OphauG2|6497 ATGCGTCTATACGCACTCTTTGGCGCTTTGGCGCTGTCTACAACGGTTAATTCTGCGCTATCAGACTCAAGCCCA TGGCTCTTATTCTCCACGGCCAAGTTTCAAGACACTTCGAATACAAATCAAGTTCAGACTAGCTCATCAGTGCTA AAGCACTCCAAAGAGATTCTGGCGTCATGTCCAACGGAACACTATCTCGTTGTTTCGCAACCTGGCGTGCATGGT GTTGAGCTGGGGCGGCCGGGCAGCTGTGCGATGCCGCATCTTTGTCGTGCCATTGATGATGTGCGTGTCAAAAGC AAATTCACTGTGGCCGAGGTTGTTGGCCATGTGACACATCCAGGCATTGCGCAGCATATTCGAGAGTCTTGCGCG CAGAAGAACAAGGTGGCGACTGTCAACCATGTTGACCTGGTGTCGATTCCTCGAGAGGGCCGAACCAGTGCACTG TTTAGCAATGATGCGACGCTTGCTACTAGCTTGGATGCCATCATGTCGACCAACAGCTTCACCATCATCTTTTAC TCCCCTCCTGGCGAGCCGGTGTACGAAGCAGAGTTTAGCGATTCGCTACATATAGAAATGAAGCGCGACATGCAC TCCATGCCCATGCGGCGCAAGGACAATGACTCGGAGCGAGATACTCGTCCCCTATTCGAAAAATACCAATTCTTC ACGCCAGGTGTGTTTATGGGCATAATTACGGCCCTGATCCTGCTTTCGCTCCTCAATGTTGGCATCAGGGCTTTG TCGAGCCTTCAGGTGCCGTACGGGGCCTTTGAGAAGGAGAATGGACCGGCTGCCCACAAGAAATATCAGTGA |
| Gene | >OphauG2|6497 ATGCGTCTATACGCACTCTTTGGCGCTTTGGCGCTGTCTACAACGGTTAATTCTGCGCTATCAGACTCAAGCCCA TGGCTCTTATTCTCCACGGCCAAGTGAGAGCTTTCCTCCTCCCCCCTCAAGATTCAATGGTAGCCAACTAACGAG GCTGCAAGGTTTCAAGACACTTCGAATACAAATCAAGTTCAGACTAGCTCATCAGTGCTAAAGCACTCCAAAGAG ATTCTGGCGTCATGTCCAACGGAACACTATCTCGTTGTTTCGCAACCTGGCGTGCATGGTGTTGAGCTGGGGCGG CCGGGCAGCTGTGCGATGCCGCATCTTTGTCGTGCCATTGATGATGTGCGTGTCAAAAGCAAATTCACTGTGGCC GAGGTTGTTGGCCATGTGACACATCCAGGCATTGCGCAGCATATTCGAGAGTCTTGCGCGCAGAAGAACAAGGTG GCGACTGTCAACCATGTTGACCTGGTGTCGATTCCTCGAGAGGGCCGAACCAGTGCACTGTTTAGCAATGGTAGG CCAGATTTCTCTACACTTTTGGCTCAAGACGTTGACAGAAATGCCAAGATGCGACGCTTGCTACTAGCTTGGATG CCATCATGTCGACCAACAGCTTCACCATCATCTTTTACTCCCCTCCTGGCGAGCCGGTGTACGAAGCAGAGTTTA GCGATTCGCTACATATAGAAATGAAGCGCGACATGCACTCCATGCCCATGCGGCGCAAGGACAATGACTCGGAGC GAGATACTCGTCCCCTATTCGAAAAATACCAATTCTTCACGCCAGGTACGCCCTGGCTACAAGTCCCTCGCCGCC AGAAGTTGCATTCTGACTCGATCTAGGTGTGTTTATGGGCATAATTACGGCCCTGATCCTGCTTTCGCTCCTCAA TGTTGGCATCAGGGCTTTGTCGAGCCTTCAGGTGCCGTACGGGGCCTTTGAGAAGGAGAATGGACCGGCTGCCCA CAAGAAATATCAGTGA |