Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6458
Gene name
LocationContig_668:5761..6985
Strand-
Gene length (bp)1224
Transcript length (bp)1224
Coding sequence length (bp)1224
Protein length (aa) 408

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09468 RNase_H2-Ydr279 Ydr279p protein family (RNase H2 complex component) wHTH domain 1.4E-42 112 310
PF17745 Ydr279_N Ydr279p protein triple barrel domain 3.7E-25 34 109

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O94627|RNH2B_SCHPO Ribonuclease H2 subunit B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rnh202 PE=3 SV=1 31 270 4.0E-07

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3329
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6458 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|2554
Ophiocordyceps camponoti-floridani Ophcf2|01465
Ophiocordyceps camponoti-rufipedis Ophun1|2713
Ophiocordyceps kimflemingae Ophio5|3839
Ophiocordyceps subramaniannii Hirsu2|6156

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6458
MPQTRSTMAKEPSSPASPKHALPAATSPPPRLLVLPKQAKPDARIVTLPNPRHGQPARYLVCPETGVYEFTKIAA
PSSSPRSCLIQPSCQDVDPQIVMDAHLFVATPIDPLFLVLPALACSETSPTQHGKKRLFLSSDDHLDKLPEESSH
LAEMLRWPKTRALLEARMTAICDTVEAGGQVMFRFNQDKIAPIILQKARRMSKDGLPASMEEKFVTRTLEPPLSL
QNPDAQCSPSQSLDAPDPCQPAAATTIEPSASSTSQQSTAAPVHAPNVHAVPGALDTRAEIVKLQRLRVAFDFIC
SSYVLPSVVDKMWHLLKESQLVDFSPLDQYLAKISQLRNEALAATSLSDYSRKRTCDDDDDEEARAEKKRKLQED
KKRKAAESRGIKELKKVNISGMKKMSDFFKAK*
Coding >OphauG2|6458
ATGCCTCAGACGCGCTCCACAATGGCAAAAGAGCCGTCCAGCCCTGCCTCGCCCAAACACGCCCTGCCCGCCGCC
ACGAGCCCGCCGCCACGGCTGCTCGTGCTGCCCAAGCAGGCAAAGCCCGACGCACGCATCGTCACCCTGCCCAAT
CCCAGGCACGGCCAGCCTGCGCGCTACCTCGTCTGTCCGGAAACCGGCGTCTATGAATTCACCAAAATTGCTGCC
CCGAGTTCAAGCCCGCGAAGCTGCTTAATCCAGCCCAGCTGCCAAGACGTGGATCCGCAGATTGTCATGGATGCA
CATCTCTTTGTCGCCACCCCCATTGATCCTCTGTTCCTCGTCCTCCCTGCCTTGGCCTGCTCTGAAACAAGCCCA
ACTCAACATGGCAAGAAACGACTCTTTCTCTCAAGCGACGACCATCTCGACAAACTGCCAGAAGAGTCGTCTCAC
CTGGCCGAGATGCTCCGCTGGCCCAAGACCCGGGCTCTGCTCGAGGCCCGCATGACGGCCATTTGCGATACAGTC
GAGGCTGGCGGCCAAGTCATGTTTCGCTTCAACCAGGACAAGATTGCCCCCATTATCCTCCAAAAGGCACGGAGA
ATGAGTAAAGATGGCTTGCCCGCGAGCATGGAGGAAAAATTCGTCACTCGCACCCTCGAGCCCCCTTTGTCTTTG
CAGAACCCCGATGCACAGTGCAGTCCGAGCCAGTCTCTTGATGCTCCAGACCCTTGTCAACCCGCTGCTGCGACA
ACCATTGAACCCTCTGCATCATCTACCTCGCAGCAATCAACAGCTGCACCGGTGCATGCGCCAAATGTCCATGCC
GTCCCGGGCGCACTCGATACTCGTGCAGAAATTGTCAAGCTTCAGCGACTACGCGTCGCCTTTGATTTCATCTGC
TCAAGCTACGTGCTGCCGTCTGTTGTTGACAAGATGTGGCACCTCCTCAAAGAGTCCCAGCTAGTAGACTTTTCT
CCACTCGACCAATACCTCGCCAAGATATCCCAGCTACGCAACGAGGCCCTCGCGGCAACCTCGCTGTCCGACTAT
TCACGCAAGCGGACATGCGACGACGACGACGACGAGGAAGCGCGCGCTGAGAAAAAGAGAAAACTGCAAGAGGAC
AAGAAACGCAAGGCGGCCGAGAGTCGTGGCATCAAGGAGCTTAAAAAGGTCAACATTTCTGGCATGAAAAAAATG
AGCGACTTTTTCAAAGCCAAGTGA
Transcript >OphauG2|6458
ATGCCTCAGACGCGCTCCACAATGGCAAAAGAGCCGTCCAGCCCTGCCTCGCCCAAACACGCCCTGCCCGCCGCC
ACGAGCCCGCCGCCACGGCTGCTCGTGCTGCCCAAGCAGGCAAAGCCCGACGCACGCATCGTCACCCTGCCCAAT
CCCAGGCACGGCCAGCCTGCGCGCTACCTCGTCTGTCCGGAAACCGGCGTCTATGAATTCACCAAAATTGCTGCC
CCGAGTTCAAGCCCGCGAAGCTGCTTAATCCAGCCCAGCTGCCAAGACGTGGATCCGCAGATTGTCATGGATGCA
CATCTCTTTGTCGCCACCCCCATTGATCCTCTGTTCCTCGTCCTCCCTGCCTTGGCCTGCTCTGAAACAAGCCCA
ACTCAACATGGCAAGAAACGACTCTTTCTCTCAAGCGACGACCATCTCGACAAACTGCCAGAAGAGTCGTCTCAC
CTGGCCGAGATGCTCCGCTGGCCCAAGACCCGGGCTCTGCTCGAGGCCCGCATGACGGCCATTTGCGATACAGTC
GAGGCTGGCGGCCAAGTCATGTTTCGCTTCAACCAGGACAAGATTGCCCCCATTATCCTCCAAAAGGCACGGAGA
ATGAGTAAAGATGGCTTGCCCGCGAGCATGGAGGAAAAATTCGTCACTCGCACCCTCGAGCCCCCTTTGTCTTTG
CAGAACCCCGATGCACAGTGCAGTCCGAGCCAGTCTCTTGATGCTCCAGACCCTTGTCAACCCGCTGCTGCGACA
ACCATTGAACCCTCTGCATCATCTACCTCGCAGCAATCAACAGCTGCACCGGTGCATGCGCCAAATGTCCATGCC
GTCCCGGGCGCACTCGATACTCGTGCAGAAATTGTCAAGCTTCAGCGACTACGCGTCGCCTTTGATTTCATCTGC
TCAAGCTACGTGCTGCCGTCTGTTGTTGACAAGATGTGGCACCTCCTCAAAGAGTCCCAGCTAGTAGACTTTTCT
CCACTCGACCAATACCTCGCCAAGATATCCCAGCTACGCAACGAGGCCCTCGCGGCAACCTCGCTGTCCGACTAT
TCACGCAAGCGGACATGCGACGACGACGACGACGAGGAAGCGCGCGCTGAGAAAAAGAGAAAACTGCAAGAGGAC
AAGAAACGCAAGGCGGCCGAGAGTCGTGGCATCAAGGAGCTTAAAAAGGTCAACATTTCTGGCATGAAAAAAATG
AGCGACTTTTTCAAAGCCAAGTGA
Gene >OphauG2|6458
ATGCCTCAGACGCGCTCCACAATGGCAAAAGAGCCGTCCAGCCCTGCCTCGCCCAAACACGCCCTGCCCGCCGCC
ACGAGCCCGCCGCCACGGCTGCTCGTGCTGCCCAAGCAGGCAAAGCCCGACGCACGCATCGTCACCCTGCCCAAT
CCCAGGCACGGCCAGCCTGCGCGCTACCTCGTCTGTCCGGAAACCGGCGTCTATGAATTCACCAAAATTGCTGCC
CCGAGTTCAAGCCCGCGAAGCTGCTTAATCCAGCCCAGCTGCCAAGACGTGGATCCGCAGATTGTCATGGATGCA
CATCTCTTTGTCGCCACCCCCATTGATCCTCTGTTCCTCGTCCTCCCTGCCTTGGCCTGCTCTGAAACAAGCCCA
ACTCAACATGGCAAGAAACGACTCTTTCTCTCAAGCGACGACCATCTCGACAAACTGCCAGAAGAGTCGTCTCAC
CTGGCCGAGATGCTCCGCTGGCCCAAGACCCGGGCTCTGCTCGAGGCCCGCATGACGGCCATTTGCGATACAGTC
GAGGCTGGCGGCCAAGTCATGTTTCGCTTCAACCAGGACAAGATTGCCCCCATTATCCTCCAAAAGGCACGGAGA
ATGAGTAAAGATGGCTTGCCCGCGAGCATGGAGGAAAAATTCGTCACTCGCACCCTCGAGCCCCCTTTGTCTTTG
CAGAACCCCGATGCACAGTGCAGTCCGAGCCAGTCTCTTGATGCTCCAGACCCTTGTCAACCCGCTGCTGCGACA
ACCATTGAACCCTCTGCATCATCTACCTCGCAGCAATCAACAGCTGCACCGGTGCATGCGCCAAATGTCCATGCC
GTCCCGGGCGCACTCGATACTCGTGCAGAAATTGTCAAGCTTCAGCGACTACGCGTCGCCTTTGATTTCATCTGC
TCAAGCTACGTGCTGCCGTCTGTTGTTGACAAGATGTGGCACCTCCTCAAAGAGTCCCAGCTAGTAGACTTTTCT
CCACTCGACCAATACCTCGCCAAGATATCCCAGCTACGCAACGAGGCCCTCGCGGCAACCTCGCTGTCCGACTAT
TCACGCAAGCGGACATGCGACGACGACGACGACGAGGAAGCGCGCGCTGAGAAAAAGAGAAAACTGCAAGAGGAC
AAGAAACGCAAGGCGGCCGAGAGTCGTGGCATCAAGGAGCTTAAAAAGGTCAACATTTCTGGCATGAAAAAAATG
AGCGACTTTTTCAAAGCCAAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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