© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6450 |
| Gene name | |
| Location | Contig_666:6234..7054 |
| Strand | + |
| Gene length (bp) | 820 |
| Transcript length (bp) | 765 |
| Coding sequence length (bp) | 765 |
| Protein length (aa) | 255 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01248 | Ribosomal_L7Ae | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 4.6E-21 | 114 | 206 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P29453|RL8B_YEAST | 60S ribosomal protein L8-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL8B PE=1 SV=3 | 17 | 251 | 3.0E-122 |
| sp|P17076|RL8A_YEAST | 60S ribosomal protein L8-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL8A PE=1 SV=4 | 18 | 251 | 2.0E-120 |
| sp|O13672|RL8_SCHPO | 60S ribosomal protein L8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl8 PE=1 SV=3 | 10 | 238 | 3.0E-120 |
| sp|Q2TBQ5|RL7A_BOVIN | 60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3 | 19 | 254 | 2.0E-96 |
| sp|P35685|RL7A_ORYSJ | 60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1 | 19 | 254 | 3.0E-96 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P29453|RL8B_YEAST | 60S ribosomal protein L8-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL8B PE=1 SV=3 | 17 | 251 | 3.0E-122 |
| sp|P17076|RL8A_YEAST | 60S ribosomal protein L8-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL8A PE=1 SV=4 | 18 | 251 | 2.0E-120 |
| sp|O13672|RL8_SCHPO | 60S ribosomal protein L8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl8 PE=1 SV=3 | 10 | 238 | 3.0E-120 |
| sp|Q2TBQ5|RL7A_BOVIN | 60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3 | 19 | 254 | 2.0E-96 |
| sp|P35685|RL7A_ORYSJ | 60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1 | 19 | 254 | 3.0E-96 |
| sp|P62425|RL7A_RAT | 60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2 | 19 | 254 | 1.0E-95 |
| sp|Q4R5C2|RL7A_MACFA | 60S ribosomal protein L7a OS=Macaca fascicularis GN=RPL7A PE=2 SV=1 | 19 | 254 | 1.0E-95 |
| sp|P62424|RL7A_HUMAN | 60S ribosomal protein L7a OS=Homo sapiens GN=RPL7A PE=1 SV=2 | 19 | 254 | 1.0E-95 |
| sp|P12970|RL7A_MOUSE | 60S ribosomal protein L7a OS=Mus musculus GN=Rpl7a PE=1 SV=2 | 19 | 254 | 1.0E-95 |
| sp|O57592|RL7A_TAKRU | 60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3 | 19 | 254 | 2.0E-95 |
| sp|Q9LZH9|RL7A2_ARATH | 60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=1 SV=1 | 19 | 254 | 4.0E-95 |
| sp|P49692|RL7A1_ARATH | 60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=1 SV=2 | 19 | 254 | 6.0E-95 |
| sp|P32429|RL7A_CHICK | 60S ribosomal protein L7a OS=Gallus gallus GN=RPL7A PE=2 SV=2 | 19 | 254 | 1.0E-94 |
| sp|Q90YW2|RL7A_ICTPU | 60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3 | 19 | 254 | 1.0E-92 |
| sp|P46223|RL7A_DROME | 60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=1 SV=2 | 19 | 253 | 4.0E-87 |
| sp|Q966C6|RL7A_CAEEL | 60S ribosomal protein L7a OS=Caenorhabditis elegans GN=rpl-7A PE=1 SV=3 | 18 | 247 | 7.0E-87 |
| sp|P0DJ14|RL7A_TETTH | 60S ribosomal protein L7a OS=Tetrahymena thermophila GN=RPL7A PE=1 SV=1 | 19 | 249 | 3.0E-83 |
| sp|O76732|RL7A_ANOGA | 60S ribosomal protein L7a OS=Anopheles gambiae GN=RpL7A PE=3 SV=2 | 19 | 247 | 2.0E-80 |
| sp|Q54ZD1|RL7A_DICDI | 60S ribosomal protein L7a OS=Dictyostelium discoideum GN=rpl7a PE=1 SV=1 | 19 | 247 | 6.0E-68 |
| sp|Q29375|RL7A_PIG | 60S ribosomal protein L7a (Fragment) OS=Sus scrofa GN=RPL7A PE=2 SV=1 | 81 | 212 | 3.0E-43 |
| sp|Q8SSG1|RL7A_ENCCU | 60S ribosomal protein L7a OS=Encephalitozoon cuniculi (strain GB-M1) GN=RPL7A PE=1 SV=2 | 60 | 230 | 3.0E-37 |
| sp|Q9HJ56|RL7A_THEAC | 50S ribosomal protein L7Ae OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=rpl7ae PE=3 SV=1 | 127 | 197 | 2.0E-10 |
| sp|Q97BK8|RL7A_THEVO | 50S ribosomal protein L7Ae OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=rpl7ae PE=3 SV=1 | 127 | 197 | 4.0E-10 |
| sp|Q6KZI7|RL7A_PICTO | 50S ribosomal protein L7Ae OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rpl7ae PE=3 SV=1 | 127 | 216 | 1.0E-09 |
| sp|A2BK92|RL7A_HYPBU | 50S ribosomal protein L7Ae OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) GN=rpl7ae PE=3 SV=1 | 119 | 215 | 2.0E-09 |
| sp|P54066|RL7A_METJA | 50S ribosomal protein L7Ae OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rpl7ae PE=1 SV=2 | 119 | 213 | 1.0E-08 |
| sp|B1Y9V4|RL7A_PYRNV | 50S ribosomal protein L7Ae OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl7ae PE=3 SV=1 | 119 | 215 | 2.0E-08 |
| sp|Q8TV03|RL7A_METKA | 50S ribosomal protein L7Ae OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl7ae PE=3 SV=1 | 127 | 182 | 2.0E-08 |
| sp|O29494|RL7A_ARCFU | 50S ribosomal protein L7Ae OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=rpl7ae PE=1 SV=1 | 127 | 214 | 6.0E-08 |
| sp|Q8ZTA5|RL7A_PYRAE | 50S ribosomal protein L7Ae OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rpl7ae PE=3 SV=1 | 127 | 215 | 7.0E-08 |
| sp|P62427|RL7A_NANEQ | 50S ribosomal protein L7Ae OS=Nanoarchaeum equitans (strain Kin4-M) GN=rpl7ae PE=3 SV=1 | 127 | 215 | 1.0E-07 |
| sp|Q9YAX7|RL7A_AERPE | 50S ribosomal protein L7Ae OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl7ae PE=1 SV=1 | 118 | 191 | 2.0E-07 |
| sp|A6UT51|RL7A_META3 | 50S ribosomal protein L7Ae OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl7ae PE=3 SV=1 | 115 | 197 | 3.0E-07 |
| sp|A3DMR6|RL7A_STAMF | 50S ribosomal protein L7Ae OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) GN=rpl7ae PE=3 SV=1 | 127 | 194 | 4.0E-07 |
| sp|B8D6E8|RL7A_DESK1 | 50S ribosomal protein L7Ae OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl7ae PE=3 SV=1 | 95 | 198 | 6.0E-07 |
| sp|Q54ST0|NH2L1_DICDI | NHP2-like protein 1 homolog OS=Dictyostelium discoideum GN=DDB_G0282243 PE=3 SV=1 | 127 | 217 | 6.0E-07 |
| sp|Q5JGR3|RL7A_THEKO | 50S ribosomal protein L7Ae OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=rpl7ae PE=3 SV=2 | 119 | 197 | 7.0E-07 |
| sp|Q8U160|RL7A_PYRFU | 50S ribosomal protein L7Ae OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl7ae PE=1 SV=2 | 119 | 182 | 1.0E-06 |
| sp|B6YWH9|RL7A_THEON | 50S ribosomal protein L7Ae OS=Thermococcus onnurineus (strain NA1) GN=rpl7ae PE=3 SV=1 | 127 | 197 | 1.0E-06 |
| sp|C5A1V9|RL7A_THEGJ | 50S ribosomal protein L7Ae OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl7ae PE=3 SV=1 | 119 | 182 | 1.0E-06 |
| sp|P62008|RL7A_PYRAB | 50S ribosomal protein L7Ae OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=rpl7ae PE=1 SV=1 | 119 | 182 | 1.0E-06 |
| sp|P62009|RL7A_PYRHO | 50S ribosomal protein L7Ae OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rpl7ae PE=1 SV=1 | 119 | 182 | 1.0E-06 |
| sp|A3MTA9|RL7A_PYRCJ | 50S ribosomal protein L7Ae OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl7ae PE=3 SV=1 | 127 | 215 | 2.0E-06 |
| sp|A8A912|RL7A_IGNH4 | 50S ribosomal protein L7Ae OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl7ae PE=3 SV=1 | 127 | 182 | 4.0E-06 |
| sp|Q4J8P1|RL7A_SULAC | 50S ribosomal protein L7Ae OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=rpl7ae PE=3 SV=1 | 127 | 191 | 5.0E-06 |
| sp|Q971C9|RL7A_SULTO | 50S ribosomal protein L7Ae OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=rpl7ae PE=3 SV=1 | 121 | 215 | 5.0E-06 |
| sp|P55858|RL7A_SULSO | 50S ribosomal protein L7Ae OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rpl7ae PE=1 SV=2 | 121 | 193 | 6.0E-06 |
| sp|C3N8Q2|RL7A_SULIY | 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl7ae PE=3 SV=1 | 121 | 193 | 8.0E-06 |
| sp|C3NMR6|RL7A_SULIN | 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl7ae PE=3 SV=1 | 121 | 193 | 8.0E-06 |
| sp|C3MYY9|RL7A_SULIM | 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl7ae PE=3 SV=1 | 121 | 193 | 8.0E-06 |
| sp|C3MJN1|RL7A_SULIL | 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl7ae PE=3 SV=1 | 121 | 193 | 8.0E-06 |
| sp|C4KJ77|RL7A_SULIK | 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl7ae PE=3 SV=1 | 121 | 193 | 8.0E-06 |
| sp|C3N038|RL7A_SULIA | 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.16.27) GN=rpl7ae PE=3 SV=1 | 121 | 193 | 8.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6450 MLCLIILVTRVAHVPLAQNPLIEKRPRNFGIGQDIQPKRNLSRMVKWPEYVRLQRQKKILQMRLKVPPALAQFQH VVDRNTATQVFKLLNKYRPETKPEKKERLLKEATAIKEGKKKEDVSKKPYTVKYGLNHVVGLVENKKASLVLIPN DVDPIELVVFLPSLCKKMGVPYAIIKGKARLGTVVHKKTAAVLALTEVRTEDKSELSKLISAVKDGFMEKHDQAR KQWGGGIMGAKAQMRIMKRQKAIEAATKI* |
| Coding | >OphauG2|6450 ATGTTGTGTCTCATCATTTTGGTCACCCGAGTTGCTCATGTCCCGCTCGCACAGAACCCGCTCATCGAGAAGCGT CCCCGCAACTTTGGCATAGGCCAGGATATTCAGCCTAAACGAAACCTTTCCCGCATGGTCAAGTGGCCAGAGTAT GTCCGCCTTCAGCGCCAAAAGAAGATTCTGCAGATGCGCCTCAAGGTTCCTCCTGCGCTTGCCCAGTTTCAGCAC GTCGTGGACCGCAACACGGCTACCCAGGTCTTCAAGCTCCTCAACAAGTACCGCCCTGAGACAAAGCCCGAGAAG AAGGAGCGTCTGTTGAAGGAGGCGACAGCCATCAAGGAGGGCAAGAAGAAGGAAGATGTCAGCAAGAAGCCTTAT ACAGTCAAATATGGTCTCAACCACGTGGTGGGCTTGGTGGAGAACAAGAAGGCCTCGCTAGTCCTTATCCCCAAC GATGTGGATCCCATTGAGCTCGTCGTCTTCTTGCCGTCTTTGTGCAAGAAGATGGGTGTGCCATATGCGATTATC AAGGGCAAGGCCCGCCTGGGCACAGTGGTGCACAAGAAGACTGCTGCCGTCTTGGCCCTGACCGAGGTTCGAACT GAGGACAAGAGTGAGCTGTCCAAGCTCATCTCTGCCGTCAAGGATGGGTTCATGGAGAAGCACGACCAGGCACGG AAACAGTGGGGAGGCGGCATCATGGGTGCAAAGGCTCAGATGCGCATCATGAAGCGCCAAAAGGCAATCGAGGCT GCCACCAAGATTTGA |
| Transcript | >OphauG2|6450 ATGTTGTGTCTCATCATTTTGGTCACCCGAGTTGCTCATGTCCCGCTCGCACAGAACCCGCTCATCGAGAAGCGT CCCCGCAACTTTGGCATAGGCCAGGATATTCAGCCTAAACGAAACCTTTCCCGCATGGTCAAGTGGCCAGAGTAT GTCCGCCTTCAGCGCCAAAAGAAGATTCTGCAGATGCGCCTCAAGGTTCCTCCTGCGCTTGCCCAGTTTCAGCAC GTCGTGGACCGCAACACGGCTACCCAGGTCTTCAAGCTCCTCAACAAGTACCGCCCTGAGACAAAGCCCGAGAAG AAGGAGCGTCTGTTGAAGGAGGCGACAGCCATCAAGGAGGGCAAGAAGAAGGAAGATGTCAGCAAGAAGCCTTAT ACAGTCAAATATGGTCTCAACCACGTGGTGGGCTTGGTGGAGAACAAGAAGGCCTCGCTAGTCCTTATCCCCAAC GATGTGGATCCCATTGAGCTCGTCGTCTTCTTGCCGTCTTTGTGCAAGAAGATGGGTGTGCCATATGCGATTATC AAGGGCAAGGCCCGCCTGGGCACAGTGGTGCACAAGAAGACTGCTGCCGTCTTGGCCCTGACCGAGGTTCGAACT GAGGACAAGAGTGAGCTGTCCAAGCTCATCTCTGCCGTCAAGGATGGGTTCATGGAGAAGCACGACCAGGCACGG AAACAGTGGGGAGGCGGCATCATGGGTGCAAAGGCTCAGATGCGCATCATGAAGCGCCAAAAGGCAATCGAGGCT GCCACCAAGATTTGA |
| Gene | >OphauG2|6450 ATGTTGTGTCTCATCATTTTGGTCACCCGAGTTGCTCATGTCCCGCTCGCACAGAACCCGCTCATCGAGAAGCGT CCCCGCAACTTTGGCATAGGCCAGGATATTCAGCCTAAACGAAACCTTTCCCGCATGGTCAAGTGGCCAGAGTAT GTCCGCCTTCAGCGCCAAAAGAAGATTCTGCAGATGCGCCTCAAGGTTCCTCCTGCGCTTGCCCAGTTTCAGCAC GTCGTGGACCGCAACACGGCTACCCAGGTCTTCAAGCTCCTCAACAAGTACCGCCCTGAGACAAAGCCCGAGAAG AAGGAGCGTCTGTTGAAGGAGGCGACAGCCATCAAGGAGGGCAAGAAGAAGGAAGATGTCAGCAAGAAGCCTTAT ACAGTCAAATATGGTCTCAACCACGTGGTGGGCTTGGTGGAGAACAAGAAGGCCTCGCTAGTCCTTATCCCCAAC GATGTGGATCCCATTGAGCTCGTCGTCTTCTTGCCGTCTTTGTGCAAGAAGATGGGTGTGCCATATGCGATTATC AAGGGCAAGGCCCGCCTGGGCACAGTGGTGCACAAGAAGGTGATTACATGCCGCTGAATACATTGCGCGATGGCT AGAAGCTAACGAGTTGCAGACTGCTGCCGTCTTGGCCCTGACCGAGGTTCGAACTGAGGACAAGAGTGAGCTGTC CAAGCTCATCTCTGCCGTCAAGGATGGGTTCATGGAGAAGCACGACCAGGCACGGAAACAGTGGGGAGGCGGCAT CATGGGTGCAAAGGCTCAGATGCGCATCATGAAGCGCCAAAAGGCAATCGAGGCTGCCACCAAGATTTGA |