© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6414 |
| Gene name | |
| Location | Contig_66:18928..20028 |
| Strand | - |
| Gene length (bp) | 1100 |
| Transcript length (bp) | 987 |
| Coding sequence length (bp) | 987 |
| Protein length (aa) | 329 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.1E-05 | 130 | 194 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.9E-13 | 214 | 322 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C0SPB2|YWTG_BACSU | Putative metabolite transport protein YwtG OS=Bacillus subtilis (strain 168) GN=ywtG PE=3 SV=1 | 134 | 322 | 7.0E-07 |
| sp|P45598|ARAE_KLEOX | Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1 | 141 | 327 | 2.0E-06 |
| sp|Q6NWF1|GTR12_DANRE | Solute carrier family 2, facilitated glucose transporter member 12 OS=Danio rerio GN=slc2a12 PE=2 SV=2 | 154 | 319 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 78 | 100 | 22 |
| 2 | 133 | 155 | 22 |
| 3 | 162 | 184 | 22 |
| 4 | 239 | 261 | 22 |
| 5 | 268 | 290 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6414 MTDQELQDDVRLFVDNHLPIVEYQDLLRAARVAKDVRLYDEVARHEELETRHSLPVTLTRIEKTALRREQDVAFS EKGMLVVIATVSVAALLQGMVQSSFNSASLYAALWGLDNTRHTETSNNDDWRLGAANASPWFFAALLGCPLSLPI NYWYGRRGAITFAAFLILVSSIGAIFVKSWTQLFCVRIINGLGSCISGHLGLGYPEWELTDVSGMGIKAVSTTIL ASETAVGFWRGSAILAWQLWVAFGIMMGFSLNLIFTLAESDRITFGLIQGAPMVPSLALLIMAVGFCPESPRYHL LKGPNYSVRKAYKTLQQVRNTEVRLLDA* |
| Coding | >OphauG2|6414 ATGACGGACCAAGAACTGCAAGACGACGTCAGACTGTTTGTTGACAATCACTTACCGATTGTGGAATACCAAGAC CTGTTGCGTGCTGCTAGAGTGGCCAAGGATGTCCGTCTGTACGACGAGGTTGCCCGTCATGAGGAGCTCGAGACT CGTCATTCTCTCCCTGTCACACTTACAAGAATAGAAAAGACTGCCTTGCGCCGCGAGCAGGATGTTGCGTTTAGT GAGAAGGGCATGCTAGTTGTCATTGCCACAGTATCTGTGGCCGCACTTCTCCAAGGTATGGTCCAGTCATCCTTC AATTCGGCTTCTCTGTACGCAGCGCTGTGGGGGCTTGACAACACCAGGCACACTGAGACCTCCAACAACGACGAC TGGCGCCTTGGGGCTGCCAATGCCTCGCCCTGGTTCTTTGCTGCCCTTCTAGGTTGTCCCCTCTCCCTTCCCATC AACTATTGGTACGGGAGGAGGGGAGCCATTACTTTTGCAGCGTTCCTAATTCTCGTGAGCTCAATTGGAGCCATC TTTGTCAAATCCTGGACACAGCTGTTCTGCGTGCGAATAATCAATGGCCTGGGTTCGTGCATCTCGGGACATCTT GGCCTGGGTTACCCAGAGTGGGAGCTGACTGATGTATCAGGCATGGGCATCAAGGCAGTGAGCACTACCATACTT GCGTCTGAGACGGCAGTTGGGTTCTGGCGCGGCTCCGCCATTCTTGCTTGGCAGCTATGGGTCGCCTTTGGCATC ATGATGGGGTTTAGCTTGAACCTCATCTTTACCTTGGCCGAATCAGATCGCATCACGTTTGGGCTCATTCAAGGT GCGCCAATGGTTCCTAGCCTTGCCTTGCTTATCATGGCGGTTGGGTTTTGTCCCGAGTCTCCCCGATATCACCTC TTGAAAGGGCCCAATTATAGTGTCCGAAAGGCGTACAAAACTCTGCAGCAAGTCAGAAACACAGAGGTACGACTA TTAGATGCCTGA |
| Transcript | >OphauG2|6414 ATGACGGACCAAGAACTGCAAGACGACGTCAGACTGTTTGTTGACAATCACTTACCGATTGTGGAATACCAAGAC CTGTTGCGTGCTGCTAGAGTGGCCAAGGATGTCCGTCTGTACGACGAGGTTGCCCGTCATGAGGAGCTCGAGACT CGTCATTCTCTCCCTGTCACACTTACAAGAATAGAAAAGACTGCCTTGCGCCGCGAGCAGGATGTTGCGTTTAGT GAGAAGGGCATGCTAGTTGTCATTGCCACAGTATCTGTGGCCGCACTTCTCCAAGGTATGGTCCAGTCATCCTTC AATTCGGCTTCTCTGTACGCAGCGCTGTGGGGGCTTGACAACACCAGGCACACTGAGACCTCCAACAACGACGAC TGGCGCCTTGGGGCTGCCAATGCCTCGCCCTGGTTCTTTGCTGCCCTTCTAGGTTGTCCCCTCTCCCTTCCCATC AACTATTGGTACGGGAGGAGGGGAGCCATTACTTTTGCAGCGTTCCTAATTCTCGTGAGCTCAATTGGAGCCATC TTTGTCAAATCCTGGACACAGCTGTTCTGCGTGCGAATAATCAATGGCCTGGGTTCGTGCATCTCGGGACATCTT GGCCTGGGTTACCCAGAGTGGGAGCTGACTGATGTATCAGGCATGGGCATCAAGGCAGTGAGCACTACCATACTT GCGTCTGAGACGGCAGTTGGGTTCTGGCGCGGCTCCGCCATTCTTGCTTGGCAGCTATGGGTCGCCTTTGGCATC ATGATGGGGTTTAGCTTGAACCTCATCTTTACCTTGGCCGAATCAGATCGCATCACGTTTGGGCTCATTCAAGGT GCGCCAATGGTTCCTAGCCTTGCCTTGCTTATCATGGCGGTTGGGTTTTGTCCCGAGTCTCCCCGATATCACCTC TTGAAAGGGCCCAATTATAGTGTCCGAAAGGCGTACAAAACTCTGCAGCAAGTCAGAAACACAGAGGTACGACTA TTAGATGCCTGA |
| Gene | >OphauG2|6414 ATGACGGACCAAGAACTGCAAGACGACGTCAGACTGTTTGTTGACAATCACTTACCGATTGTGGAATACCAAGAC CTGTTGCGTGCTGCTAGAGTGGCCAAGGATGTCCGTCTGTACGACGAGGTTGCCCGTCATGAGGAGCTCGAGACT CGTCATTCTCTCCCTGTCACACTTACAAGAATAGAAAAGACTGCCTTGCGCCGCGAGCAGGATGTTGCGTTTAGT GAGAAGGGCATGCTAGTTGTCATTGCCACAGTATCTGTGGCCGCACTTCTCCAAGGTTGGTGGGGAGGAAATCGC GCCATATCTTGACGCATATCTGACACGTGCACTGCAGGTATGGTCCAGTCATCCTTCAATTCGGCTTCTCTGTAC GCAGCGCTGTGGGGGCTTGACAACACCAGGCACACTGAGACCTCCAACAACGACGACTGGCGCCTTGGGGCTGCC AATGCCTCGCCCTGGTTCTTTGCTGCCCTTCTAGGTTGTCCCCTCTCCCTTCCCATCAACTATTGGTACGGGAGG AGGGGAGCCATTACTTTTGCAGCGTTCCTAATTCTCGTGAGCTCAATTGGAGCCATCTTTGTCAAATCCTGGACA CAGCTGTTCTGCGTGCGAATAATCAATGGCCTGGGTTCGTGCATCTCGGGACATCTTGGCCTGGGTTACCCAGAG TGGGAGCTGACTGATGTATCAGGCATGGGCATCAAGGCAGTGAGCACTACCATACTTGCGTCTGAGACGGCAGTT GGGTTCTGGCGCGGCTCCGCCATTCTTGCTTGGCAGCTATGGTTGGACACACAAATTTCAAGCTGGAAACTGGGG TGAGCTGACTACTTCCCCTTAGGGTCGCCTTTGGCATCATGATGGGGTTTAGCTTGAACCTCATCTTTACCTTGG CCGAATCAGATCGCATCACGTTTGGGCTCATTCAAGGTGCGCCAATGGTTCCTAGCCTTGCCTTGCTTATCATGG CGGTTGGGTTTTGTCCCGAGTCTCCCCGATATCACCTCTTGAAAGGGCCCAATTATAGTGTCCGAAAGGCGTACA AAACTCTGCAGCAAGTCAGAAACACAGAGGTACGACTATTAGATGCCTGA |