Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6409
Gene name
LocationContig_66:38..1399
Strand-
Gene length (bp)1361
Transcript length (bp)1266
Coding sequence length (bp)1266
Protein length (aa) 422

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04437 RINT1_TIP1 RINT-1 / TIP-1 family 3.3E-52 243 420

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q6NUQ1|RINT1_HUMAN RAD50-interacting protein 1 OS=Homo sapiens GN=RINT1 PE=1 SV=1 45 412 1.0E-06

GO

GO Term Description Terminal node
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport Yes
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum Yes
GO:0070939 Dsl1/NZR complex Yes
GO:0051641 cellular localization No
GO:0051179 localization No
GO:0006810 transport No
GO:0032991 protein-containing complex No
GO:0051234 establishment of localization No
GO:0051649 establishment of localization in cell No
GO:0008150 biological_process No
GO:0046907 intracellular transport No
GO:0099023 vesicle tethering complex No
GO:0140534 endoplasmic reticulum protein-containing complex No
GO:0005575 cellular_component No
GO:0009987 cellular process No
GO:0048193 Golgi vesicle transport No
GO:0016192 vesicle-mediated transport No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2897
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6409 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|4274
Ophiocordyceps camponoti-floridani Ophcf2|03155
Ophiocordyceps camponoti-rufipedis Ophun1|1961
Ophiocordyceps kimflemingae Ophio5|5661
Ophiocordyceps subramaniannii Hirsu2|4827

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6409
MSSQRVSNAPCSLDMRVEDFLDDRLQSATDLDALDDLVASVETQRNQLQSQLDTAAKELDEARHSAQDGKTLLQS
RIDDFNKLQQSIDARVQAAATSEAPNEAIARLQLPMKKLQSVEQAQQYLMLLDNVERLGAQVRWHLPASPKTALQ
PYTRLKELAMQLAEMPGGNGLHLVAHVENVVQTLWHDMKNIMSGELEAILAKRPWPRIDPHAQMDDEWMACIEKL
LDLQMPEIVHSSALVSLLPFDVMTAILVAEFRFHFLSDKPTSSLQAVGTHCFPWFLSTIDKWQDFFRDNMGHLLV
GKFQGTSVGSKMAYLDPVCALVTAMLPVMQEKVNLTALEAIKRPPLFSTLMSQLLALDDNIRSMFNYDGGDAEQG
WPGLAADVLDKHFDDWFRTERAFAFERFEHIIESQDARKIDFDFAV*
Coding >OphauG2|6409
ATGTCGTCTCAGCGCGTGAGCAACGCGCCATGCTCGCTGGACATGCGGGTCGAGGATTTCCTCGACGACCGGCTC
CAGTCAGCCACCGATCTCGACGCCCTGGACGACCTGGTGGCGAGCGTCGAGACGCAGAGGAACCAGCTGCAGTCA
CAGCTCGACACTGCAGCCAAGGAGCTGGACGAGGCTCGCCATAGTGCACAAGACGGCAAGACTCTACTGCAGTCG
CGAATAGACGATTTCAATAAGCTTCAGCAAAGCATCGATGCCCGTGTCCAGGCGGCCGCCACGTCCGAGGCCCCC
AACGAAGCCATCGCGCGCCTACAGCTGCCTATGAAGAAGCTGCAGTCTGTCGAGCAGGCTCAGCAGTATCTGATG
CTGCTCGACAATGTTGAGAGGCTGGGAGCCCAAGTGCGATGGCATCTTCCCGCCAGTCCAAAGACTGCACTCCAG
CCCTATACTCGACTCAAGGAGCTGGCCATGCAGCTCGCCGAGATGCCTGGAGGCAACGGGCTACATCTCGTTGCC
CATGTCGAAAACGTGGTGCAAACCCTCTGGCATGACATGAAGAACATCATGTCTGGCGAGCTTGAAGCAATACTG
GCCAAACGACCCTGGCCACGCATCGACCCGCACGCCCAAATGGACGACGAATGGATGGCCTGCATCGAGAAGCTC
CTCGACCTGCAGATGCCAGAGATTGTCCACAGCTCGGCCCTTGTGTCCCTGCTGCCGTTTGATGTCATGACGGCC
ATCTTGGTTGCAGAGTTTCGTTTCCACTTCCTCAGCGATAAGCCAACGAGCAGCTTGCAGGCTGTTGGGACACAT
TGCTTTCCTTGGTTCCTCAGCACCATTGACAAGTGGCAAGACTTTTTTCGTGACAACATGGGCCATTTGCTCGTC
GGCAAGTTTCAAGGCACGTCGGTCGGCAGCAAAATGGCATACCTCGACCCCGTCTGTGCTCTTGTCACTGCAATG
CTACCCGTTATGCAGGAAAAGGTCAATCTGACGGCCCTCGAGGCCATAAAGAGGCCTCCTCTCTTCAGCACCTTG
ATGTCGCAACTGTTGGCCCTCGACGACAATATCCGCTCCATGTTCAACTATGACGGAGGCGATGCTGAACAGGGC
TGGCCCGGACTCGCTGCCGACGTCTTGGACAAGCATTTCGACGATTGGTTTCGCACGGAAAGAGCATTTGCCTTT
GAGCGTTTTGAGCACATTATCGAGTCGCAGGATGCGCGCAAGATTGACTTTGACTTTGCGGTATAA
Transcript >OphauG2|6409
ATGTCGTCTCAGCGCGTGAGCAACGCGCCATGCTCGCTGGACATGCGGGTCGAGGATTTCCTCGACGACCGGCTC
CAGTCAGCCACCGATCTCGACGCCCTGGACGACCTGGTGGCGAGCGTCGAGACGCAGAGGAACCAGCTGCAGTCA
CAGCTCGACACTGCAGCCAAGGAGCTGGACGAGGCTCGCCATAGTGCACAAGACGGCAAGACTCTACTGCAGTCG
CGAATAGACGATTTCAATAAGCTTCAGCAAAGCATCGATGCCCGTGTCCAGGCGGCCGCCACGTCCGAGGCCCCC
AACGAAGCCATCGCGCGCCTACAGCTGCCTATGAAGAAGCTGCAGTCTGTCGAGCAGGCTCAGCAGTATCTGATG
CTGCTCGACAATGTTGAGAGGCTGGGAGCCCAAGTGCGATGGCATCTTCCCGCCAGTCCAAAGACTGCACTCCAG
CCCTATACTCGACTCAAGGAGCTGGCCATGCAGCTCGCCGAGATGCCTGGAGGCAACGGGCTACATCTCGTTGCC
CATGTCGAAAACGTGGTGCAAACCCTCTGGCATGACATGAAGAACATCATGTCTGGCGAGCTTGAAGCAATACTG
GCCAAACGACCCTGGCCACGCATCGACCCGCACGCCCAAATGGACGACGAATGGATGGCCTGCATCGAGAAGCTC
CTCGACCTGCAGATGCCAGAGATTGTCCACAGCTCGGCCCTTGTGTCCCTGCTGCCGTTTGATGTCATGACGGCC
ATCTTGGTTGCAGAGTTTCGTTTCCACTTCCTCAGCGATAAGCCAACGAGCAGCTTGCAGGCTGTTGGGACACAT
TGCTTTCCTTGGTTCCTCAGCACCATTGACAAGTGGCAAGACTTTTTTCGTGACAACATGGGCCATTTGCTCGTC
GGCAAGTTTCAAGGCACGTCGGTCGGCAGCAAAATGGCATACCTCGACCCCGTCTGTGCTCTTGTCACTGCAATG
CTACCCGTTATGCAGGAAAAGGTCAATCTGACGGCCCTCGAGGCCATAAAGAGGCCTCCTCTCTTCAGCACCTTG
ATGTCGCAACTGTTGGCCCTCGACGACAATATCCGCTCCATGTTCAACTATGACGGAGGCGATGCTGAACAGGGC
TGGCCCGGACTCGCTGCCGACGTCTTGGACAAGCATTTCGACGATTGGTTTCGCACGGAAAGAGCATTTGCCTTT
GAGCGTTTTGAGCACATTATCGAGTCGCAGGATGCGCGCAAGATTGACTTTGACTTTGCGGTATAA
Gene >OphauG2|6409
ATGTCGTCTCAGCGCGTGAGCAACGCGCCATGCTCGCTGGACATGCGGGTCGAGGATTTCCTCGACGACCGGCTC
CAGTCAGCCACCGATCTCGACGCCCTGGACGACCTGGTGGCGAGCGTCGAGACGCAGAGGAACCAGCTGCAGTCA
CAGCTCGACACTGCAGCCAAGGAGCTGGACGAGGCTCGCCATAGTGCACAAGACGGCAAGACTCTACTGCAGTCG
CGAATAGACGATTTCAATAAGCTTCAGCAAAGCATCGATGCCCGTGTCCAGGCGGCCGCCACGTCCGAGGCCCCC
AACGAAGCCATCGCGCGCCTACAGCTGCCTATGAAGAAGCTGCAGTCTGTCGAGCAGGCTCAGCAGTATCTGATG
CTGCTCGACAATGTTGAGAGGCTGGGAGCCCAAGTGCGATGGCATCTTCCCGCCAGTCCAAAGACTGCACTCCAG
CCCTATACTCGACTCAAGGAGCTGGCCATGCAGCTCGCCGAGATGCCTGGAGGCAACGGGCTACATCTCGTTGCC
CATGTCGAAAACGTGGTGCAAACCCTCTGGCATGACATGAAGAACATCATGTCTGGCGAGCTTGAAGCAATACTG
GCCAAACGACCCTGGCCACGCATCGACCCGCACGCCCAAATGGACGACGAATGGATGGCCTGCATCGAGAAGCTC
CTCGACCTGCAGATGCCAGAGATTGTCCACAGCTCGGCCCTTGTGTCCCTGCTGCCGTTTGATGTCATGACGGCC
ATCTTGGTTGCAGAGTTTCGTTTCCACTTCCTCAGCGATAAGCCAACGAGCAGCTTGCAGGCTGTTGGGACACAT
TGCTTTCCTTGGTTCCTCAGCACCATTGACAAGTGGCAAGACTTTTTTCGTGACAACATGGGCCATTTGCTCGTC
GGCAAGTTTCAAGGCACGTCGGTCGGCAGCAAAATGGCATACCTCGACCCCGTCTGTGCTCTTGTCACTGCAATG
CTACCCGTTATGCAGGAAAAGGTCAATCTGACGGCCCTCGAGGCCATAAAGAGGCCTCCTCTCTTCAGCACCTTG
ATGTCGCAACTGTTGGCCCTCGACGACAATATCCGCTCCATGTTCAACTATGACGGAGGCGATGCTGAACAGGGC
TGGCCCGGACTCGCTGCCGACGTCTTGGACAAGCATTTCGACGATTGGTTTCGCACGGAAAGAGCATTTGCCTTT
GAGCGTTTTGAGCACATTATCGAGTCGCAGGATGCGCGCAAGATTGACTTTGACTTTGCGGTTGGGGGGAAGATG
AAGCCCACATACGCTGCAGTGCTCATTACAGACTTGCTGCGCACAGTCACTAACAAGTACGCCCGATTACGCAAG
CTCAGGTATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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