Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6407
Gene name
LocationContig_659:8725..9834
Strand+
Gene length (bp)1109
Transcript length (bp)849
Coding sequence length (bp)849
Protein length (aa) 283

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01144 CoA_trans Coenzyme A transferase 3.0E-07 1 38
PF01144 CoA_trans Coenzyme A transferase 3.3E-33 70 265

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|B2GV06|SCOT1_RAT Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus GN=Oxct1 PE=1 SV=1 1 282 8.0E-93
sp|P55809|SCOT1_HUMAN Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Homo sapiens GN=OXCT1 PE=1 SV=1 1 282 5.0E-92
sp|Q29551|SCOT1_PIG Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Sus scrofa GN=OXCT1 PE=1 SV=2 1 282 5.0E-90
sp|Q9D0K2|SCOT1_MOUSE Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus GN=Oxct1 PE=1 SV=1 1 282 5.0E-89
sp|Q54JD9|SCOT_DICDI Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial OS=Dictyostelium discoideum GN=oxct1 PE=3 SV=1 1 282 6.0E-88
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Swissprot ID Swissprot Description Start End E-value
sp|B2GV06|SCOT1_RAT Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus GN=Oxct1 PE=1 SV=1 1 282 8.0E-93
sp|P55809|SCOT1_HUMAN Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Homo sapiens GN=OXCT1 PE=1 SV=1 1 282 5.0E-92
sp|Q29551|SCOT1_PIG Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Sus scrofa GN=OXCT1 PE=1 SV=2 1 282 5.0E-90
sp|Q9D0K2|SCOT1_MOUSE Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus GN=Oxct1 PE=1 SV=1 1 282 5.0E-89
sp|Q54JD9|SCOT_DICDI Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial OS=Dictyostelium discoideum GN=oxct1 PE=3 SV=1 1 282 6.0E-88
sp|Q09450|SCOT_CAEEL Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial OS=Caenorhabditis elegans GN=C05C10.3 PE=3 SV=1 1 281 1.0E-82
sp|Q9ESL0|SCO2B_MOUSE Succinyl-CoA:3-ketoacid coenzyme A transferase 2B, mitochondrial OS=Mus musculus GN=Oxct2b PE=2 SV=1 1 282 1.0E-82
sp|Q9JJN4|SCO2A_MOUSE Succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial OS=Mus musculus GN=Oxct2a PE=1 SV=2 1 282 2.0E-82
sp|Q9BYC2|SCOT2_HUMAN Succinyl-CoA:3-ketoacid coenzyme A transferase 2, mitochondrial OS=Homo sapiens GN=OXCT2 PE=2 SV=2 1 282 3.0E-81
sp|Q5XIJ9|SCO2A_RAT Succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial OS=Rattus norvegicus GN=Oxct2a PE=1 SV=1 1 282 2.0E-80
sp|P42316|SCOB_BACSU Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Bacillus subtilis (strain 168) GN=scoB PE=1 SV=1 66 280 1.0E-76
sp|P0C7I8|SCOB_XANCP Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=lpsJ PE=3 SV=1 69 272 2.0E-76
sp|B0RVK3|SCOB_XANCB Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Xanthomonas campestris pv. campestris (strain B100) GN=lpsJ PE=3 SV=1 69 272 2.0E-76
sp|P56007|SCOB_HELPY Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=scoB PE=1 SV=1 69 274 7.0E-76
sp|Q9ZLE4|SCOB_HELPJ Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=scoB PE=3 SV=1 69 274 2.0E-75
sp|P9WPW3|SCOB_MYCTU Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=scoB PE=1 SV=1 64 276 3.0E-71
sp|P9WPW2|SCOB_MYCTO Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=scoB PE=3 SV=1 64 276 3.0E-71
sp|P63651|SCOB_MYCBO Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=scoB PE=3 SV=1 64 276 3.0E-71
sp|P76459|ATOA_ECOLI Acetate CoA-transferase subunit beta OS=Escherichia coli (strain K12) GN=atoA PE=1 SV=1 69 275 2.0E-60
sp|P23673|CTFB_CLOAB Butyrate--acetoacetate CoA-transferase subunit B OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=ctfB PE=1 SV=1 72 281 4.0E-55
sp|P44874|ATOA_HAEIN Acetate CoA-transferase subunit beta OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=atoA PE=3 SV=1 72 282 3.0E-54
sp|O34466|YODR_BACSU Probable coenzyme A transferase subunit beta OS=Bacillus subtilis (strain 168) GN=yodR PE=3 SV=1 68 274 2.0E-50
sp|P0A102|PCAJ_PSEPU 3-oxoadipate CoA-transferase subunit B OS=Pseudomonas putida GN=pcaJ PE=1 SV=2 69 272 2.0E-46
sp|P0A101|PCAJ_PSEPK 3-oxoadipate CoA-transferase subunit B OS=Pseudomonas putida (strain KT2440) GN=pcaJ PE=3 SV=2 69 272 2.0E-46
sp|Q59091|PCAJ_ACIAD 3-oxoadipate CoA-transferase subunit B OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=pcaJ PE=1 SV=2 69 270 2.0E-45
sp|B0RVK4|SCOA_XANCB Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A OS=Xanthomonas campestris pv. campestris (strain B100) GN=lpsI PE=3 SV=1 2 51 5.0E-08
sp|P0C7I7|SCOA_XANCP Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=lpsI PE=3 SV=1 2 51 8.0E-08
sp|P42315|SCOA_BACSU Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit A OS=Bacillus subtilis (strain 168) GN=scoA PE=1 SV=1 2 53 3.0E-06
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GO

GO Term Description Terminal node
GO:0008410 CoA-transferase activity Yes
GO:0016782 transferase activity, transferring sulphur-containing groups No
GO:0003674 molecular_function No
GO:0016740 transferase activity No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6407
MAKAARLTIVEAEEIVETGQIDPNDVDLPGIFVDRIVRSTKEKQIELLKIRDAGECSAPASRDAAQQRRMRIGQR
AAKELRQGFYVNLGVGIPTLAATFIPPGRTVWIQSENGILGMGPYPTRDEVDADIVNAGKETVTLVPGASCFDSS
ESFGMIRGGHIDVSILGVSAAGDLANFMIPGKVFKGMGGAMDLVANPDNTKIVVATEHVAKDGSSKIVKECRLPL
TGARVVSTIITDLCVFQVNRKLGSLTLTELAPGVSLDQVRSKTEAPFDVADQIMSME*
Coding >OphauG2|6407
ATGGCCAAGGCCGCGCGCCTCACCATTGTCGAGGCCGAGGAAATCGTAGAGACGGGGCAAATCGACCCCAACGAC
GTTGACCTGCCCGGCATCTTTGTCGACCGCATCGTGCGCTCCACCAAGGAAAAACAAATCGAGCTGCTCAAGATT
CGAGACGCTGGTGAGTGCTCGGCCCCGGCGTCGCGAGATGCAGCGCAGCAGCGGCGCATGCGCATCGGGCAGCGC
GCGGCAAAGGAGCTGCGGCAGGGCTTCTATGTCAATCTGGGCGTTGGGATTCCCACGCTGGCGGCCACGTTTATC
CCGCCCGGGCGCACGGTTTGGATCCAGAGCGAAAACGGCATCTTGGGCATGGGGCCGTATCCGACGCGCGACGAG
GTGGATGCGGACATTGTCAATGCCGGCAAGGAGACGGTGACGCTGGTGCCGGGAGCGTCGTGCTTTGATTCGAGC
GAGTCGTTTGGCATGATTCGCGGCGGGCACATTGACGTGTCGATTCTGGGGGTCAGCGCGGCAGGCGACTTGGCC
AACTTTATGATTCCCGGCAAGGTCTTCAAGGGCATGGGCGGCGCCATGGATCTGGTTGCCAACCCCGACAATACC
AAGATTGTCGTTGCGACGGAGCACGTGGCCAAGGACGGCTCCTCCAAGATTGTCAAGGAGTGCCGGCTGCCTCTG
ACGGGGGCTCGCGTGGTCAGCACCATAATTACCGACCTGTGCGTCTTCCAAGTCAACCGCAAACTCGGCTCCCTC
ACCCTCACTGAACTCGCCCCCGGCGTCTCCCTTGACCAGGTCCGCTCCAAGACTGAGGCGCCCTTTGACGTTGCC
GACCAAATCATGTCGATGGAGTAA
Transcript >OphauG2|6407
ATGGCCAAGGCCGCGCGCCTCACCATTGTCGAGGCCGAGGAAATCGTAGAGACGGGGCAAATCGACCCCAACGAC
GTTGACCTGCCCGGCATCTTTGTCGACCGCATCGTGCGCTCCACCAAGGAAAAACAAATCGAGCTGCTCAAGATT
CGAGACGCTGGTGAGTGCTCGGCCCCGGCGTCGCGAGATGCAGCGCAGCAGCGGCGCATGCGCATCGGGCAGCGC
GCGGCAAAGGAGCTGCGGCAGGGCTTCTATGTCAATCTGGGCGTTGGGATTCCCACGCTGGCGGCCACGTTTATC
CCGCCCGGGCGCACGGTTTGGATCCAGAGCGAAAACGGCATCTTGGGCATGGGGCCGTATCCGACGCGCGACGAG
GTGGATGCGGACATTGTCAATGCCGGCAAGGAGACGGTGACGCTGGTGCCGGGAGCGTCGTGCTTTGATTCGAGC
GAGTCGTTTGGCATGATTCGCGGCGGGCACATTGACGTGTCGATTCTGGGGGTCAGCGCGGCAGGCGACTTGGCC
AACTTTATGATTCCCGGCAAGGTCTTCAAGGGCATGGGCGGCGCCATGGATCTGGTTGCCAACCCCGACAATACC
AAGATTGTCGTTGCGACGGAGCACGTGGCCAAGGACGGCTCCTCCAAGATTGTCAAGGAGTGCCGGCTGCCTCTG
ACGGGGGCTCGCGTGGTCAGCACCATAATTACCGACCTGTGCGTCTTCCAAGTCAACCGCAAACTCGGCTCCCTC
ACCCTCACTGAACTCGCCCCCGGCGTCTCCCTTGACCAGGTCCGCTCCAAGACTGAGGCGCCCTTTGACGTTGCC
GACCAAATCATGTCGATGGAGTAA
Gene >OphauG2|6407
ATGGCCAAGGCCGCGCGCCTCACCATTGTCGAGGCCGAGGAAATCGTAGAGACGGGGCAAATCGACCCCAACGAC
GTTGACCTGCCCGGCATCTTTGTCGACCGCATCGTGCGCTCCACCAAGGAAAAACAAATCGAGCTGCTCAAGATT
CGAGACGCTGGTGAGTGCTCGGCCCCGGCGTCGCGAGATGCAGCGCAGCAGCGGCGCATGCGCATCGGGCAGCGC
GCGGCAAAGGAGCTGCGGCAGGGCTTCTATGTCAATCTGGGCGTTGGGATTCCCACGCTGGCGGCCACGTTTATC
CCGCCCGGGCGCACGGTTTGGATCCAGAGCGAAAACGGCATCTTGGGCATGGGGCCGTATCCGACGCGCGACGAG
GTGGATGCGGACATTGTCAATGCCGGCAAGGAGACGGTGACGCTGGTGCCGGGAGCGTCGTGCTTTGATTCGAGC
GAGTCGTTTGGCATGATTCGCGGCGGGCACATTGACGTGTCGATTCTGGGGGTGAGTTTGTCTTTTGCAGTCTTT
TCAACAATTTGTCTTTTGCAGTCTTTTCAACAATTTCTCTTTTCCAGTCTTTTCTTGCCCCGTCAAGGCGGAATA
GTAAAGGTGGTGCAATGTGCTCACTCATGGCTAGGCCCTCCAGGTCAGCGCGGCAGGCGACTTGGCCAACTTTAT
GATTCCCGGCAAGGTCTTCAAGGGCATGGGCGGCGCCATGGATCTGGTTGCCAACCCCGACAATACCAAGATTGT
CGTTGCGACGGAGCACGTGGCCAAGGACGGCTCCTCCAAGATTGTCAAGGAGTGCCGGCTGCCTCTGACGGGGGC
TCGCGTGGTCAGCACCATAATTACCGACCTGGTACGTCTTGTCTCTCTCTCTCCCTCCCTCTCTCTCTATATATA
TATATCCCTCTCTCTCTCTCTATATATATATATATATCCCTCTCTCTCTCCCTCTATATATCTAACAGTCGCAGT
GCGTCTTCCAAGTCAACCGCAAACTCGGCTCCCTCACCCTCACTGAACTCGCCCCCGGCGTCTCCCTTGACCAGG
TCCGCTCCAAGACTGAGGCGCCCTTTGACGTTGCCGACCAAATCATGTCGATGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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