Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6406
Gene name
LocationContig_659:5288..6110
Strand-
Gene length (bp)822
Transcript length (bp)552
Coding sequence length (bp)552
Protein length (aa) 184

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 7.0E-18 1 168

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 1 170 2.0E-27
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 169 3.0E-27
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 1 170 5.0E-27
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 1 128 1.0E-20
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 1 170 8.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 1 170 2.0E-27
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 169 3.0E-27
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 1 170 5.0E-27
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 1 128 1.0E-20
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 1 170 8.0E-18
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 2 169 1.0E-17
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 1 170 2.0E-17
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 3 149 4.0E-15
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 3 171 1.0E-14
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 1 149 1.0E-14
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 1 155 3.0E-14
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 1 179 7.0E-14
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 3 132 1.0E-11
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 3 129 3.0E-10
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 1 148 2.0E-09
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 4 158 2.0E-09
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 2 151 1.0E-08
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 3 140 1.0E-08
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 3 132 2.0E-08
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 3 147 5.0E-08
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 16 149 7.0E-07
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 19 109 4.0E-06
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0051179 localization No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 49 71 22
3 78 100 22
4 145 167 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6406
MAWGIVTMCLGFVRGFASFVAVRAVLGLTEGGLLPGMVLYLSGLYTRGELALRIGLLYTAASLAGAFGAIGPRAG
LQGWRWIFIIEGLMTVVAGAIAVALLPNSPSTAHYLTPAEREWASKRLAKHGSKDEPFRWSEVRRGIFNVQVWLS
STAYFAILSGLYSSSLFVPSRRNLAPASEAPFY*
Coding >OphauG2|6406
ATGGCCTGGGGCATCGTCACCATGTGTCTAGGCTTTGTGCGCGGCTTTGCAAGCTTTGTTGCCGTGCGCGCCGTC
TTGGGCTTGACTGAAGGCGGGCTTTTACCAGGCATGGTGCTCTATCTCTCGGGATTGTATACCCGCGGCGAGCTG
GCGTTGCGCATTGGCCTTTTATACACAGCTGCCTCGCTCGCGGGGGCTTTTGGCGCTATTGGTCCTCGCGCGGGA
CTCCAAGGCTGGCGCTGGATCTTCATCATCGAGGGCCTCATGACTGTTGTGGCTGGCGCAATAGCCGTTGCCCTT
CTTCCAAACAGCCCGTCTACCGCTCACTATCTGACGCCTGCTGAGCGAGAATGGGCATCTAAGCGTCTTGCGAAA
CACGGCTCCAAAGACGAACCCTTTCGCTGGTCCGAGGTGCGCCGCGGCATCTTCAACGTCCAAGTCTGGCTCTCT
TCAACAGCATACTTTGCCATTCTCTCCGGCCTCTATTCCTCGAGCCTCTTTGTACCGTCTCGCCGTAATCTAGCA
CCCGCCTCGGAGGCCCCTTTTTACTAA
Transcript >OphauG2|6406
ATGGCCTGGGGCATCGTCACCATGTGTCTAGGCTTTGTGCGCGGCTTTGCAAGCTTTGTTGCCGTGCGCGCCGTC
TTGGGCTTGACTGAAGGCGGGCTTTTACCAGGCATGGTGCTCTATCTCTCGGGATTGTATACCCGCGGCGAGCTG
GCGTTGCGCATTGGCCTTTTATACACAGCTGCCTCGCTCGCGGGGGCTTTTGGCGCTATTGGTCCTCGCGCGGGA
CTCCAAGGCTGGCGCTGGATCTTCATCATCGAGGGCCTCATGACTGTTGTGGCTGGCGCAATAGCCGTTGCCCTT
CTTCCAAACAGCCCGTCTACCGCTCACTATCTGACGCCTGCTGAGCGAGAATGGGCATCTAAGCGTCTTGCGAAA
CACGGCTCCAAAGACGAACCCTTTCGCTGGTCCGAGGTGCGCCGCGGCATCTTCAACGTCCAAGTCTGGCTCTCT
TCAACAGCATACTTTGCCATTCTCTCCGGCCTCTATTCCTCGAGCCTCTTTGTACCGTCTCGCCGTAATCTAGCA
CCCGCCTCGGAGGCCCCTTTTTACTAA
Gene >OphauG2|6406
ATGGCCTGGGGCATCGTCACCATGTGTCTAGGCTTTGTGCGCGGCTTTGCAAGCTTTGTTGCCGTGCGCGCCGTC
TTGGGCTTGACTGAAGGCGGGCTTTTACCAGGCATGGTGCTCTATCTCTCGGGATTGTATACCCGCGGCGAGCTG
GCGTTGCGCATTGGCCTTTTATACACAGCTGCCTCGCTCGCGGGGGCTTTTGGCGGTTCGTTTTTTTCTTCTTTT
TTTTTTTCGTTTCGTTTCCCCCCTGTTCTTCCATTTTTTTTTAGGTCATTTTTTCCCCCATTTTTCTGTTGGCGT
CGCCGGCATCAACTGAAGCGGTAAATCAAAGGCTTGCTGGCTCGTGGCTTATCAGCTATTGGTCCTCGCGCGGGA
CTCCAAGGCTGGCGCTGGATCTTCATCATCGAGGGCCTCATGGTGAGTGTTTGTTAGTGAATATTTCCTCGCCCA
ATGCTGATGCCAGTGATCCCAGACTGTTGTGGCTGGCGCAATAGCCGTTGCCCTTCTTCCAAACAGCCCGTCTAC
CGCTCACTATCTGACGCCTGCTGAGCGAGAATGGGCATCTAAGCGTCTTGCGAAACACGGCTCCAAGTATTTCAA
TCACAGCCCCCCCTTTTTTTTCGCCTTGGTCCTTTCCTGGACTGACTACTATCAAGAGACGAACCCTTTCGCTGG
TCCGAGGTGCGCCGCGGCATCTTCAACGTCCAAGTCTGGCTCTCTTCAACAGCATACTTTGCCATTCTCTCCGGC
CTCTATTCCTCGAGCCTCTTTGTACCGTCTCGCCGTAATCTAGCACCCGCCTCGGAGGCCCCTTTTTACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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