© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6395 |
| Gene name | |
| Location | Contig_656:6524..8233 |
| Strand | - |
| Gene length (bp) | 1709 |
| Transcript length (bp) | 1425 |
| Coding sequence length (bp) | 1425 |
| Protein length (aa) | 475 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.7E-22 | 36 | 372 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.5E-06 | 84 | 217 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P11551|FUCP_ECOLI | L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 | 24 | 413 | 2.0E-53 |
| sp|P0C105|GLUP_BRUAB | Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 | 28 | 404 | 3.0E-52 |
| sp|Q2YIJ8|GLUP_BRUA2 | Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 | 28 | 404 | 3.0E-52 |
| sp|Q8YB48|GLUP_BRUME | Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 | 28 | 404 | 2.0E-50 |
| sp|P44776|FUCP_HAEIN | L-fucose permease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fucP PE=3 SV=1 | 19 | 406 | 2.0E-37 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P11551|FUCP_ECOLI | L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 | 24 | 413 | 2.0E-53 |
| sp|P0C105|GLUP_BRUAB | Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 | 28 | 404 | 3.0E-52 |
| sp|Q2YIJ8|GLUP_BRUA2 | Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 | 28 | 404 | 3.0E-52 |
| sp|Q8YB48|GLUP_BRUME | Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 | 28 | 404 | 2.0E-50 |
| sp|P44776|FUCP_HAEIN | L-fucose permease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fucP PE=3 SV=1 | 19 | 406 | 2.0E-37 |
| sp|Q9ZK41|GLUP_HELPJ | Putative glucose/galactose transporter OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=gluP PE=3 SV=1 | 33 | 393 | 1.0E-34 |
| sp|O25788|GLUP_HELPY | Putative glucose/galactose transporter OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=gluP PE=3 SV=1 | 33 | 393 | 2.0E-33 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 66 | 88 | 22 |
| 3 | 95 | 114 | 19 |
| 4 | 119 | 141 | 22 |
| 5 | 162 | 184 | 22 |
| 6 | 194 | 216 | 22 |
| 7 | 245 | 267 | 22 |
| 8 | 282 | 304 | 22 |
| 9 | 311 | 330 | 19 |
| 10 | 334 | 356 | 22 |
| 11 | 368 | 390 | 22 |
| 12 | 400 | 422 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6395 MRLAGFFKPGSHDKATPAARLTLRESIFPIALVTVLFFLWGFSYGLLDTLNKHFQDVLHIDRARSAGIQAAYFGA YPLASIGHAAWLLRHYGYRVVFIWGLCLYALGALLAIAALKNKSFGGFCACIFIIGNGLGSLETAANPFIAVCGP PKYAELRLNISQAFNGIGAVIAPVLGSYVFFNFSDNEALDNVQWVYLSIAVFVLILACAFFFATIPEVTDEDMEA QAQQTGDSGNTKPFRKQYRLFHAAFAQFCYTGAQVAIASFFINYAMGTRPNTDASLGAKFFAGAQAAFAIGRFFG SALIKYTRPRYVFLAFLTCCIIFIGPAITQRGNIGISMLYVVLFFESICFPSIVALGMRGLGRHTKRGSGLIIGG VIGGACAPPLTGVAGDHLGDGRAMVVPMVFFVAAWSYALCVNFVPAYSRVLDSYNDAPAGLGDKSQDDIEGITSE ASGLSEKHLGQSSQTGQTKLPDAS* |
| Coding | >OphauG2|6395 ATGAGGCTCGCCGGCTTTTTCAAACCTGGCTCTCATGACAAGGCGACCCCTGCCGCCAGACTGACGCTGCGCGAA TCCATCTTTCCCATTGCTCTCGTCACCGTCCTCTTCTTTCTCTGGGGGTTTAGCTACGGCCTGCTCGACACGCTC AACAAGCACTTCCAAGACGTGCTCCATATTGATCGCGCTCGCTCAGCCGGTATACAGGCTGCCTACTTTGGCGCA TACCCCTTGGCCTCAATTGGCCACGCCGCTTGGCTTCTTCGCCATTACGGATACCGCGTCGTCTTCATCTGGGGC CTCTGTCTCTACGCCCTTGGCGCTCTGCTTGCCATTGCCGCTCTCAAGAACAAGAGCTTTGGGGGCTTCTGCGCC TGCATCTTCATCATTGGCAACGGCCTCGGCTCTCTTGAAACGGCGGCAAACCCCTTCATCGCAGTCTGTGGCCCT CCCAAGTATGCCGAGCTGCGCCTCAACATCTCCCAGGCCTTCAATGGCATTGGCGCCGTCATTGCCCCCGTGCTT GGCTCCTATGTCTTCTTCAACTTTAGCGACAACGAGGCTCTGGACAATGTGCAATGGGTCTATCTGTCCATTGCC GTCTTTGTGCTCATCCTGGCCTGCGCCTTTTTCTTTGCCACCATTCCCGAGGTGACGGATGAGGACATGGAGGCC CAGGCTCAGCAAACAGGCGACAGCGGCAATACAAAGCCCTTTCGCAAACAATACCGCCTCTTCCACGCCGCCTTT GCCCAGTTTTGCTACACTGGCGCCCAGGTGGCCATTGCCAGCTTCTTCATCAATTACGCCATGGGCACGCGGCCC AACACCGACGCCTCGCTCGGAGCAAAGTTCTTTGCCGGCGCCCAGGCCGCCTTTGCCATTGGCCGCTTCTTTGGC TCTGCCCTCATCAAGTACACCCGCCCGCGATACGTCTTTCTCGCCTTCTTGACCTGCTGCATCATCTTCATTGGC CCCGCCATTACGCAGCGCGGCAACATTGGCATCTCCATGCTCTACGTCGTCCTCTTCTTCGAGTCCATCTGCTTC CCCTCCATTGTGGCTCTGGGCATGCGCGGCCTGGGCCGACACACCAAGCGCGGCAGCGGCCTCATTATTGGCGGA GTCATTGGTGGTGCCTGTGCTCCCCCGTTGACAGGCGTGGCTGGCGACCATTTGGGCGACGGCAGGGCCATGGTG GTGCCCATGGTCTTCTTCGTCGCTGCCTGGTCATACGCGCTGTGTGTCAACTTTGTCCCGGCCTACTCACGGGTT CTCGACTCGTACAACGACGCGCCAGCCGGGCTGGGCGACAAGAGCCAAGACGACATTGAGGGCATCACCAGCGAG GCCTCTGGCCTGTCAGAAAAGCATCTCGGCCAGTCGTCGCAGACTGGCCAAACTAAATTGCCTGATGCGTCATAA |
| Transcript | >OphauG2|6395 ATGAGGCTCGCCGGCTTTTTCAAACCTGGCTCTCATGACAAGGCGACCCCTGCCGCCAGACTGACGCTGCGCGAA TCCATCTTTCCCATTGCTCTCGTCACCGTCCTCTTCTTTCTCTGGGGGTTTAGCTACGGCCTGCTCGACACGCTC AACAAGCACTTCCAAGACGTGCTCCATATTGATCGCGCTCGCTCAGCCGGTATACAGGCTGCCTACTTTGGCGCA TACCCCTTGGCCTCAATTGGCCACGCCGCTTGGCTTCTTCGCCATTACGGATACCGCGTCGTCTTCATCTGGGGC CTCTGTCTCTACGCCCTTGGCGCTCTGCTTGCCATTGCCGCTCTCAAGAACAAGAGCTTTGGGGGCTTCTGCGCC TGCATCTTCATCATTGGCAACGGCCTCGGCTCTCTTGAAACGGCGGCAAACCCCTTCATCGCAGTCTGTGGCCCT CCCAAGTATGCCGAGCTGCGCCTCAACATCTCCCAGGCCTTCAATGGCATTGGCGCCGTCATTGCCCCCGTGCTT GGCTCCTATGTCTTCTTCAACTTTAGCGACAACGAGGCTCTGGACAATGTGCAATGGGTCTATCTGTCCATTGCC GTCTTTGTGCTCATCCTGGCCTGCGCCTTTTTCTTTGCCACCATTCCCGAGGTGACGGATGAGGACATGGAGGCC CAGGCTCAGCAAACAGGCGACAGCGGCAATACAAAGCCCTTTCGCAAACAATACCGCCTCTTCCACGCCGCCTTT GCCCAGTTTTGCTACACTGGCGCCCAGGTGGCCATTGCCAGCTTCTTCATCAATTACGCCATGGGCACGCGGCCC AACACCGACGCCTCGCTCGGAGCAAAGTTCTTTGCCGGCGCCCAGGCCGCCTTTGCCATTGGCCGCTTCTTTGGC TCTGCCCTCATCAAGTACACCCGCCCGCGATACGTCTTTCTCGCCTTCTTGACCTGCTGCATCATCTTCATTGGC CCCGCCATTACGCAGCGCGGCAACATTGGCATCTCCATGCTCTACGTCGTCCTCTTCTTCGAGTCCATCTGCTTC CCCTCCATTGTGGCTCTGGGCATGCGCGGCCTGGGCCGACACACCAAGCGCGGCAGCGGCCTCATTATTGGCGGA GTCATTGGTGGTGCCTGTGCTCCCCCGTTGACAGGCGTGGCTGGCGACCATTTGGGCGACGGCAGGGCCATGGTG GTGCCCATGGTCTTCTTCGTCGCTGCCTGGTCATACGCGCTGTGTGTCAACTTTGTCCCGGCCTACTCACGGGTT CTCGACTCGTACAACGACGCGCCAGCCGGGCTGGGCGACAAGAGCCAAGACGACATTGAGGGCATCACCAGCGAG GCCTCTGGCCTGTCAGAAAAGCATCTCGGCCAGTCGTCGCAGACTGGCCAAACTAAATTGCCTGATGCGTCATAA |
| Gene | >OphauG2|6395 ATGAGGCTCGCCGGCTTTTTCAAACCTGGCTCTCATGACAAGGCGACCCCTGCCGCCAGACTGACGCTGCGCGAA TCCATCTTTCCCATTGCTCTCGTCACCGTCCTCTTCTTTCTCTGGGGGTTTAGCTACGGCCTGCTCGACACGCTC AACAAGCACTTCCAAGACGTGCTCCATATTGATCGCGCTCGCTCAGCCGGTATACAGGCTGCCTACTTTGGGTCC GTCCTGTTTCCTACTTTTCTTCCTTCTTCATCTCATCCCTCGAGTCTTTGTCGCATCTTGTCGTCCTAACTCTCT CTCCATCTTGTTTTTTCCCTGGCTGTAGCGCATACCCCTTGGCCTCAATTGGCCACGCCGCTTGGCTTCTTCGCC ATTACGGATACCGCGTCGTCTTCATCTGGGGCCTCTGTCTCTACGCCCTTGGCGCTCTGCTTGCCATTGCCGCTC TCAAGAACAAGAGCTTTGGGGGCTTCTGCGCCTGCATCTTCATCATTGGCAACGGCCTCGGCTCTCTTGAAACGG CGGCAAACCCCTTCATCGCAGGTGCGTCTTTTTTTTTCTTTTCCCATTTTTTTCTTTTCCCATTTTTTTTTTTGG CAAAATCATGAACCAATTGCCACGACAATTGCTGAGTCTTGTCCAGTCTGTGGCCCTCCCAAGTATGCCGAGCTG CGCCTCAACATCTCCCAGGCCTTCAATGGCATTGGCGCCGTCATTGCCCCCGTGCTTGGCTCCTATGTCTTCTTC AACTTTAGCGACAACGAGGCTCTGGACAATGTGCAATGGGTCTATCTGTCCATTGCCGTCTTTGTGCTCATCCTG GCCTGCGCCTTTTTCTTTGCCACCATTCCCGAGGTGACGGATGAGGGTGAGTGCATGGCATAGCAATCCCCTATA ATCAACCCTCCCGAGCACAGCTAACCTTGGCCACTTGCTACCCAAAAGACATGGAGGCCCAGGCTCAGCAAACAG GCGACAGCGGCAATACAAAGCCCTTTCGCAAACAATACCGCCTCTTCCACGCCGCCTTTGCCCAGTTTTGCTACA CTGGCGCCCAGGTGGCCATTGCCAGCTTCTTCATCAATTACGCCATGGGCACGCGGCCCAACACCGACGCCTCGC TCGGAGCAAAGTTCTTTGCCGGCGCCCAGGCCGCCTTTGCCATTGGCCGCTTCTTTGGCTCTGCCCTCATCAAGT ACACCCGCCCGCGATACGTCTTTCTCGCCTTCTTGACCTGCTGCATCATCTTCATTGGCCCCGCCATTACGCAGC GCGGCAACATTGGCATCTCCATGCTCTACGTCGTCCTCTTCTTCGAGTCCATCTGCTTCCCCTCCATTGTGGCTC TGGGCATGCGCGGCCTGGGCCGACACACCAAGCGCGGCAGCGGCCTCATTATTGGCGGAGTCATTGGTGGTGCCT GTGCTCCCCCGTTGACAGGCGTGGCTGGCGACCATTTGGGCGACGGCAGGGCCATGGTGGTGCCCATGGTCTTCT TCGTCGCTGCCTGGTCATACGCGCTGTGTGTCAACTTTGTCCCGGCCTACTCACGGGTTCTCGACTCGTACAACG ACGCGCCAGCCGGGCTGGGCGACAAGAGCCAAGACGACATTGAGGGCATCACCAGCGAGGCCTCTGGCCTGTCAG AAAAGCATCTCGGCCAGTCGTCGCAGACTGGCCAAACTAAATTGCCTGATGCGTCATAA |