© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6389 |
| Gene name | |
| Location | Contig_655:3304..4914 |
| Strand | - |
| Gene length (bp) | 1610 |
| Transcript length (bp) | 1431 |
| Coding sequence length (bp) | 1431 |
| Protein length (aa) | 477 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 63 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 89 | 111 | 22 |
| 2 | 118 | 137 | 19 |
| 3 | 152 | 174 | 22 |
| 4 | 194 | 216 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6389 MGHSSQPFMYSGLDGGSGSEWRFPVAVFDPKAVTRASWQAKPAKPRARGPLISLDQHPDAHALPSYRAHRGRELS KAARNGIKWLRRVQWALRMLQLSAAAAVLALMTLLVRMDPVTVWTLRIAPGLSVLHCLYAVLHLSRSASGRTPAS SAAYHAFAAAIDLGLLSAYVFGAMRLGRTLHGPVATSLSDQSLAPVFVSTVYYALIGTAGLELLSLSMSLWLGFM FRRISLLPPDMNPLERRLTTRPMHAKKLSTTTVSSSSGDEHGGDLSSCSSLPFTHARAGHDYVPYRHSASRLPTN LSNLWTAQDRYINKSSPAYTLLQQHNEQHNDGPLKTHPDPLRVHPPPAEKRDAMQSLMSTLQPKPYAWQSNVSVT DETRRLTHQKQPWRGPPVSSRGQLQGGHSPKAHGKDVDSEPSPLHHPIIGSSSRLSSGSDYRTRRSTSTFASAAA PERRRVSGKHGATEQATDQVSGPYYS* |
| Coding | >OphauG2|6389 ATGGGCCATTCGTCGCAGCCGTTTATGTACAGCGGCCTTGATGGCGGGAGTGGCTCGGAATGGCGTTTTCCTGTT GCCGTGTTTGATCCCAAGGCGGTGACGAGAGCTAGCTGGCAAGCCAAGCCTGCTAAGCCCCGGGCTCGAGGGCCC TTGATTTCGCTGGATCAGCATCCTGATGCACATGCGTTGCCGTCATATCGCGCTCACAGAGGGAGAGAGTTGAGC AAGGCGGCGAGAAATGGAATCAAGTGGCTGCGCCGCGTGCAGTGGGCGCTGCGGATGCTTCAGCTCAGCGCTGCA GCGGCGGTTCTGGCCCTCATGACTCTTCTTGTCAGGATGGATCCGGTGACGGTATGGACACTGAGAATTGCACCC GGCTTGAGCGTCTTGCATTGCTTGTATGCGGTTTTGCATCTCTCGCGCTCAGCGTCTGGCCGCACGCCCGCGTCG TCAGCCGCCTACCACGCGTTTGCTGCGGCGATTGACCTTGGTCTGCTATCGGCATACGTCTTTGGCGCGATGCGG CTTGGCAGGACGCTGCATGGCCCCGTCGCCACCAGCCTGTCGGACCAGAGCCTGGCGCCGGTGTTTGTTTCGACG GTTTACTATGCCCTGATTGGCACGGCTGGCTTGGAGCTGCTTTCTCTGTCCATGTCGCTCTGGCTTGGCTTCATG TTTCGGCGGATCAGTCTTTTGCCTCCGGACATGAATCCCTTGGAGCGCCGGCTGACGACGCGGCCAATGCACGCC AAAAAGCTGTCCACGACCACAGTCAGCAGCAGCTCCGGCGATGAGCATGGCGGCGACTTGTCGAGCTGTTCGAGT CTGCCCTTTACACATGCTAGAGCCGGTCACGATTATGTTCCTTACCGACACTCTGCCTCCCGGCTCCCTACAAAC TTGAGCAATCTGTGGACGGCCCAGGACAGATATATCAACAAATCCTCTCCAGCGTATACCTTGCTCCAGCAACAC AATGAGCAACACAATGACGGCCCATTGAAAACGCACCCGGACCCTTTGCGAGTCCATCCACCGCCAGCTGAGAAA CGCGACGCCATGCAGTCACTCATGTCCACCTTGCAGCCCAAGCCCTATGCCTGGCAGTCCAATGTGAGCGTCACA GACGAGACCCGTCGCCTGACACATCAGAAACAGCCATGGCGCGGCCCGCCTGTATCCTCTCGAGGACAGTTGCAA GGTGGCCACAGCCCCAAGGCCCATGGCAAAGACGTCGATTCAGAGCCATCGCCACTCCATCACCCCATCATCGGC TCCTCAAGTCGGCTTTCTTCCGGCAGCGACTATCGTACAAGACGCTCTACCTCTACATTTGCGTCTGCTGCAGCC CCTGAGCGACGCCGAGTAAGCGGTAAACATGGTGCCACAGAACAAGCCACTGACCAGGTTTCGGGGCCGTATTAC TCATGA |
| Transcript | >OphauG2|6389 ATGGGCCATTCGTCGCAGCCGTTTATGTACAGCGGCCTTGATGGCGGGAGTGGCTCGGAATGGCGTTTTCCTGTT GCCGTGTTTGATCCCAAGGCGGTGACGAGAGCTAGCTGGCAAGCCAAGCCTGCTAAGCCCCGGGCTCGAGGGCCC TTGATTTCGCTGGATCAGCATCCTGATGCACATGCGTTGCCGTCATATCGCGCTCACAGAGGGAGAGAGTTGAGC AAGGCGGCGAGAAATGGAATCAAGTGGCTGCGCCGCGTGCAGTGGGCGCTGCGGATGCTTCAGCTCAGCGCTGCA GCGGCGGTTCTGGCCCTCATGACTCTTCTTGTCAGGATGGATCCGGTGACGGTATGGACACTGAGAATTGCACCC GGCTTGAGCGTCTTGCATTGCTTGTATGCGGTTTTGCATCTCTCGCGCTCAGCGTCTGGCCGCACGCCCGCGTCG TCAGCCGCCTACCACGCGTTTGCTGCGGCGATTGACCTTGGTCTGCTATCGGCATACGTCTTTGGCGCGATGCGG CTTGGCAGGACGCTGCATGGCCCCGTCGCCACCAGCCTGTCGGACCAGAGCCTGGCGCCGGTGTTTGTTTCGACG GTTTACTATGCCCTGATTGGCACGGCTGGCTTGGAGCTGCTTTCTCTGTCCATGTCGCTCTGGCTTGGCTTCATG TTTCGGCGGATCAGTCTTTTGCCTCCGGACATGAATCCCTTGGAGCGCCGGCTGACGACGCGGCCAATGCACGCC AAAAAGCTGTCCACGACCACAGTCAGCAGCAGCTCCGGCGATGAGCATGGCGGCGACTTGTCGAGCTGTTCGAGT CTGCCCTTTACACATGCTAGAGCCGGTCACGATTATGTTCCTTACCGACACTCTGCCTCCCGGCTCCCTACAAAC TTGAGCAATCTGTGGACGGCCCAGGACAGATATATCAACAAATCCTCTCCAGCGTATACCTTGCTCCAGCAACAC AATGAGCAACACAATGACGGCCCATTGAAAACGCACCCGGACCCTTTGCGAGTCCATCCACCGCCAGCTGAGAAA CGCGACGCCATGCAGTCACTCATGTCCACCTTGCAGCCCAAGCCCTATGCCTGGCAGTCCAATGTGAGCGTCACA GACGAGACCCGTCGCCTGACACATCAGAAACAGCCATGGCGCGGCCCGCCTGTATCCTCTCGAGGACAGTTGCAA GGTGGCCACAGCCCCAAGGCCCATGGCAAAGACGTCGATTCAGAGCCATCGCCACTCCATCACCCCATCATCGGC TCCTCAAGTCGGCTTTCTTCCGGCAGCGACTATCGTACAAGACGCTCTACCTCTACATTTGCGTCTGCTGCAGCC CCTGAGCGACGCCGAGTAAGCGGTAAACATGGTGCCACAGAACAAGCCACTGACCAGGTTTCGGGGCCGTATTAC TCATGA |
| Gene | >OphauG2|6389 ATGGGCCATTCGTCGCAGCCGTTTATGTACAGCGGCCTTGATGGCGGGAGTGGCTCGGAATGGCGTTTTCCTGTT GCCGTGTTTGATCCCAAGGCGGTGACGAGAGCTAGCTGGCAAGCCAAGCCTGCTAAGCCCCGGGCTCGAGGGCCC TTGATTTCGCTGGATCAGCATCCTGAGTAAGGGGTTTTTTTTTTTAAACTTGGATGAGGGAAGGGGAAAAAAAAG GGGGGGGAGGTGTTGGCGGCTTTGATGGATGGAATTGACCTGACCCTGGATATAGTGCACATGCGTTGCCGTCAT ATCGCGCTCACAGAGGGAGAGAGTTGAGCAAGGCGGCGAGAAATGGAATCAAGTGGCTGCGCCGCGTGCAGTGGG CGCTGCGGATGCTTCAGCTCAGCGCTGCAGCGGCGGTTCTGGCCCTCATGACTCTTCTTGTCAGGATGGATCCGG TGACGGTATGGACACTGAGAATTGCAGTGAGTCGCCATTCTTGACTCTCGTGTCCGAAGCTATCTTCATTTCTAA ATTCTAATTTTTTTTTTTTTTTTTAGCCCGGCTTGAGCGTCTTGCATTGCTTGTATGCGGTTTTGCATCTCTCGC GCTCAGCGTCTGGCCGCACGCCCGCGTCGTCAGCCGCCTACCACGCGTTTGCTGCGGCGATTGACCTTGGTCTGC TATCGGCATACGTCTTTGGCGCGATGCGGCTTGGCAGGACGCTGCATGGCCCCGTCGCCACCAGCCTGTCGGACC AGAGCCTGGCGCCGGTGTTTGTTTCGACGGTTTACTATGCCCTGATTGGCACGGCTGGCTTGGAGCTGCTTTCTC TGTCCATGTCGCTCTGGCTTGGCTTCATGTTTCGGCGGATCAGTCTTTTGCCTCCGGACATGAATCCCTTGGAGC GCCGGCTGACGACGCGGCCAATGCACGCCAAAAAGCTGTCCACGACCACAGTCAGCAGCAGCTCCGGCGATGAGC ATGGCGGCGACTTGTCGAGCTGTTCGAGTCTGCCCTTTACACATGCTAGAGCCGGTCACGATTATGTTCCTTACC GACACTCTGCCTCCCGGCTCCCTACAAACTTGAGCAATCTGTGGACGGCCCAGGACAGATATATCAACAAATCCT CTCCAGCGTATACCTTGCTCCAGCAACACAATGAGCAACACAATGACGGCCCATTGAAAACGCACCCGGACCCTT TGCGAGTCCATCCACCGCCAGCTGAGAAACGCGACGCCATGCAGTCACTCATGTCCACCTTGCAGCCCAAGCCCT ATGCCTGGCAGTCCAATGTGAGCGTCACAGACGAGACCCGTCGCCTGACACATCAGAAACAGCCATGGCGCGGCC CGCCTGTATCCTCTCGAGGACAGTTGCAAGGTGGCCACAGCCCCAAGGCCCATGGCAAAGACGTCGATTCAGAGC CATCGCCACTCCATCACCCCATCATCGGCTCCTCAAGTCGGCTTTCTTCCGGCAGCGACTATCGTACAAGACGCT CTACCTCTACATTTGCGTCTGCTGCAGCCCCTGAGCGACGCCGAGTAAGCGGTAAACATGGTGCCACAGAACAAG CCACTGACCAGGTTTCGGGGCCGTATTACTCATGA |