Protein ID | OphauG2|6386 |
Gene name | |
Location | Contig_654:7528..9643 |
Strand | + |
Gene length (bp) | 2115 |
Transcript length (bp) | 2115 |
Coding sequence length (bp) | 2115 |
Protein length (aa) | 705 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10263 | SprT-like | SprT-like family | 3.9E-36 | 443 | 574 |
PF17283 | Zn_ribbon_SprT | SprT-like zinc ribbon domain | 5.3E-10 | 580 | 617 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O42953|YGM4_SCHPO | HMG box-containing protein C19G7.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC19G7.04 PE=4 SV=2 | 411 | 670 | 1.0E-39 |
sp|Q96QF7|ACRC_HUMAN | Acidic repeat-containing protein OS=Homo sapiens GN=ACRC PE=2 SV=1 | 505 | 627 | 1.0E-10 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 22 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|6386 MARLAQCPSRSDNEPLQPNTRAQNHELDNLASSAKSTTGDYKDNTKGFVLKSQSTTTLVRKMRRIKDSHAPPPTL AYGMHEDGFKAQSLLPSTSLSPAKVRETCCIAHNSINHQTGLESSLSMIKRTTCLDDIKSDRESDRVMTPEYYSS CESPFNPIIRQPYSRGHFITRDKNDIRRNNSQESIRRDSYLDNSTKSATEDQGGGDVNDGEETSSVYQTAAEDLT TNEIDSDCTRDEPAQGLVDTHVSVFETDSGSNRSDSIHSHLESNDPSVEVRPQLKKPVGSYLPQNIFSDPNLEHH QGQGVMPTFQQKATPPQTESLGETESSTLSTGPQIRPLRLGKVAHELLERPYKMDEWAVSTSSLDSSEDAEANKD QIEIPFTTPRIKKANTLGLTLPCDLPGNLTKSYEPSALEPRDKVAPVKSSPSKKKTKSIFDNRKDTVAKDFLSEL DAKITKGEIARLTQLTGGVKVIWTKSLNTTAGRANWRRETTQSRPADGTAKLEQRHHASIELAEKVINDESKLLN VVAHEFCHLANFMISGVNNRPHGVEFQAWAAKCSRAFGESHGIHVTTRHTYDIDFKYVWRCTTCGYEYKRHSRSI KPGRHGCGNCKGTLEQIKPVPRVAKGGATGSATGNPNQYQTFMKKHMKIVRSENPGSPQKDLMKMVAERWALDKK KAMTESMAKTGDETIGGVVDQMEQMTLNQ* |
Coding | >OphauG2|6386 ATGGCTCGATTGGCTCAGTGCCCTTCAAGAAGCGATAATGAGCCTTTACAGCCAAATACCCGTGCCCAAAACCAT GAGCTAGACAACTTGGCCTCAAGCGCAAAATCCACTACGGGCGACTATAAAGACAACACTAAAGGCTTCGTCCTC AAGTCCCAGTCTACAACAACTTTGGTGCGCAAAATGCGTCGAATCAAGGACTCACATGCACCTCCTCCAACGCTT GCCTATGGCATGCACGAAGATGGGTTCAAGGCTCAATCATTGCTCCCTTCGACATCATTAAGCCCAGCGAAGGTC AGGGAAACATGTTGTATCGCGCACAATAGTATAAATCATCAGACTGGTCTAGAATCTTCTTTATCCATGATCAAA CGTACCACATGTCTAGACGATATCAAATCAGACCGGGAATCGGACCGGGTAATGACGCCCGAATATTATAGCTCC TGCGAAAGCCCCTTCAACCCAATTATTCGTCAGCCTTATTCGCGCGGCCACTTTATCACTAGAGACAAGAATGAC ATCCGTCGAAATAATAGTCAGGAGTCTATCAGGCGTGACTCATATCTCGACAACAGTACCAAATCTGCTACAGAG GATCAAGGCGGGGGAGATGTGAACGATGGAGAAGAGACTTCCAGCGTATATCAAACTGCGGCTGAGGACTTGACA ACCAACGAAATTGACAGCGACTGTACCCGCGATGAGCCTGCCCAAGGCTTGGTGGACACGCATGTATCAGTTTTC GAGACAGACTCCGGTTCGAATCGGAGCGACAGTATCCATTCCCACTTGGAGTCGAATGACCCCAGTGTTGAAGTC AGACCCCAATTGAAGAAGCCAGTTGGCAGTTATTTGCCGCAGAATATATTTTCAGACCCCAATTTGGAGCACCAC CAAGGCCAAGGCGTGATGCCAACGTTTCAACAAAAAGCCACTCCGCCTCAGACAGAGAGTTTAGGAGAAACGGAG TCAAGCACACTGTCTACTGGGCCCCAAATCCGACCCTTGAGATTAGGAAAAGTGGCGCATGAATTGTTGGAAAGA CCTTACAAGATGGACGAATGGGCAGTTTCAACGAGTAGCCTTGATTCGAGTGAGGATGCAGAAGCCAACAAGGAT CAAATCGAAATACCGTTCACGACGCCACGCATAAAGAAAGCGAATACTCTAGGCCTCACTCTACCATGCGATTTG CCCGGGAACTTGACGAAATCTTATGAACCAAGTGCTCTTGAGCCACGGGACAAGGTGGCGCCAGTCAAGTCGAGC CCGAGCAAGAAGAAAACAAAGAGCATATTTGACAACAGAAAGGACACTGTTGCCAAGGATTTTCTTAGCGAGCTC GATGCCAAGATTACCAAAGGAGAAATTGCTAGGCTGACTCAGTTGACGGGCGGTGTCAAGGTAATATGGACCAAG TCACTCAATACGACAGCCGGCAGAGCCAACTGGCGTCGGGAGACGACACAGAGCAGACCAGCAGACGGTACAGCC AAATTGGAGCAAAGGCATCACGCATCAATTGAATTGGCCGAGAAGGTAATCAACGACGAGAGCAAACTATTGAAT GTAGTAGCTCACGAGTTTTGCCACTTGGCCAACTTTATGATAAGTGGCGTCAACAACAGACCGCACGGAGTCGAA TTTCAAGCATGGGCAGCCAAGTGCTCACGAGCTTTTGGAGAGTCCCATGGTATCCATGTGACAACTAGGCACACA TACGATATTGACTTTAAATATGTGTGGAGGTGTACTACTTGCGGCTATGAGTATAAGCGGCACTCGAGAAGTATC AAACCGGGACGACATGGGTGCGGCAACTGCAAAGGCACCCTCGAGCAGATCAAACCAGTACCTCGTGTCGCCAAG GGCGGCGCAACTGGCAGCGCAACTGGCAACCCAAACCAGTATCAAACTTTTATGAAGAAGCACATGAAAATAGTG AGGAGCGAGAACCCAGGCAGCCCTCAGAAAGACTTGATGAAAATGGTGGCTGAACGCTGGGCTCTTGACAAAAAG AAGGCTATGACTGAGAGCATGGCCAAGACTGGTGACGAGACTATTGGCGGCGTTGTTGACCAGATGGAACAAATG ACTCTCAATCAATGA |
Transcript | >OphauG2|6386 ATGGCTCGATTGGCTCAGTGCCCTTCAAGAAGCGATAATGAGCCTTTACAGCCAAATACCCGTGCCCAAAACCAT GAGCTAGACAACTTGGCCTCAAGCGCAAAATCCACTACGGGCGACTATAAAGACAACACTAAAGGCTTCGTCCTC AAGTCCCAGTCTACAACAACTTTGGTGCGCAAAATGCGTCGAATCAAGGACTCACATGCACCTCCTCCAACGCTT GCCTATGGCATGCACGAAGATGGGTTCAAGGCTCAATCATTGCTCCCTTCGACATCATTAAGCCCAGCGAAGGTC AGGGAAACATGTTGTATCGCGCACAATAGTATAAATCATCAGACTGGTCTAGAATCTTCTTTATCCATGATCAAA CGTACCACATGTCTAGACGATATCAAATCAGACCGGGAATCGGACCGGGTAATGACGCCCGAATATTATAGCTCC TGCGAAAGCCCCTTCAACCCAATTATTCGTCAGCCTTATTCGCGCGGCCACTTTATCACTAGAGACAAGAATGAC ATCCGTCGAAATAATAGTCAGGAGTCTATCAGGCGTGACTCATATCTCGACAACAGTACCAAATCTGCTACAGAG GATCAAGGCGGGGGAGATGTGAACGATGGAGAAGAGACTTCCAGCGTATATCAAACTGCGGCTGAGGACTTGACA ACCAACGAAATTGACAGCGACTGTACCCGCGATGAGCCTGCCCAAGGCTTGGTGGACACGCATGTATCAGTTTTC GAGACAGACTCCGGTTCGAATCGGAGCGACAGTATCCATTCCCACTTGGAGTCGAATGACCCCAGTGTTGAAGTC AGACCCCAATTGAAGAAGCCAGTTGGCAGTTATTTGCCGCAGAATATATTTTCAGACCCCAATTTGGAGCACCAC CAAGGCCAAGGCGTGATGCCAACGTTTCAACAAAAAGCCACTCCGCCTCAGACAGAGAGTTTAGGAGAAACGGAG TCAAGCACACTGTCTACTGGGCCCCAAATCCGACCCTTGAGATTAGGAAAAGTGGCGCATGAATTGTTGGAAAGA CCTTACAAGATGGACGAATGGGCAGTTTCAACGAGTAGCCTTGATTCGAGTGAGGATGCAGAAGCCAACAAGGAT CAAATCGAAATACCGTTCACGACGCCACGCATAAAGAAAGCGAATACTCTAGGCCTCACTCTACCATGCGATTTG CCCGGGAACTTGACGAAATCTTATGAACCAAGTGCTCTTGAGCCACGGGACAAGGTGGCGCCAGTCAAGTCGAGC CCGAGCAAGAAGAAAACAAAGAGCATATTTGACAACAGAAAGGACACTGTTGCCAAGGATTTTCTTAGCGAGCTC GATGCCAAGATTACCAAAGGAGAAATTGCTAGGCTGACTCAGTTGACGGGCGGTGTCAAGGTAATATGGACCAAG TCACTCAATACGACAGCCGGCAGAGCCAACTGGCGTCGGGAGACGACACAGAGCAGACCAGCAGACGGTACAGCC AAATTGGAGCAAAGGCATCACGCATCAATTGAATTGGCCGAGAAGGTAATCAACGACGAGAGCAAACTATTGAAT GTAGTAGCTCACGAGTTTTGCCACTTGGCCAACTTTATGATAAGTGGCGTCAACAACAGACCGCACGGAGTCGAA TTTCAAGCATGGGCAGCCAAGTGCTCACGAGCTTTTGGAGAGTCCCATGGTATCCATGTGACAACTAGGCACACA TACGATATTGACTTTAAATATGTGTGGAGGTGTACTACTTGCGGCTATGAGTATAAGCGGCACTCGAGAAGTATC AAACCGGGACGACATGGGTGCGGCAACTGCAAAGGCACCCTCGAGCAGATCAAACCAGTACCTCGTGTCGCCAAG GGCGGCGCAACTGGCAGCGCAACTGGCAACCCAAACCAGTATCAAACTTTTATGAAGAAGCACATGAAAATAGTG AGGAGCGAGAACCCAGGCAGCCCTCAGAAAGACTTGATGAAAATGGTGGCTGAACGCTGGGCTCTTGACAAAAAG AAGGCTATGACTGAGAGCATGGCCAAGACTGGTGACGAGACTATTGGCGGCGTTGTTGACCAGATGGAACAAATG ACTCTCAATCAATGA |
Gene | >OphauG2|6386 ATGGCTCGATTGGCTCAGTGCCCTTCAAGAAGCGATAATGAGCCTTTACAGCCAAATACCCGTGCCCAAAACCAT GAGCTAGACAACTTGGCCTCAAGCGCAAAATCCACTACGGGCGACTATAAAGACAACACTAAAGGCTTCGTCCTC AAGTCCCAGTCTACAACAACTTTGGTGCGCAAAATGCGTCGAATCAAGGACTCACATGCACCTCCTCCAACGCTT GCCTATGGCATGCACGAAGATGGGTTCAAGGCTCAATCATTGCTCCCTTCGACATCATTAAGCCCAGCGAAGGTC AGGGAAACATGTTGTATCGCGCACAATAGTATAAATCATCAGACTGGTCTAGAATCTTCTTTATCCATGATCAAA CGTACCACATGTCTAGACGATATCAAATCAGACCGGGAATCGGACCGGGTAATGACGCCCGAATATTATAGCTCC TGCGAAAGCCCCTTCAACCCAATTATTCGTCAGCCTTATTCGCGCGGCCACTTTATCACTAGAGACAAGAATGAC ATCCGTCGAAATAATAGTCAGGAGTCTATCAGGCGTGACTCATATCTCGACAACAGTACCAAATCTGCTACAGAG GATCAAGGCGGGGGAGATGTGAACGATGGAGAAGAGACTTCCAGCGTATATCAAACTGCGGCTGAGGACTTGACA ACCAACGAAATTGACAGCGACTGTACCCGCGATGAGCCTGCCCAAGGCTTGGTGGACACGCATGTATCAGTTTTC GAGACAGACTCCGGTTCGAATCGGAGCGACAGTATCCATTCCCACTTGGAGTCGAATGACCCCAGTGTTGAAGTC AGACCCCAATTGAAGAAGCCAGTTGGCAGTTATTTGCCGCAGAATATATTTTCAGACCCCAATTTGGAGCACCAC CAAGGCCAAGGCGTGATGCCAACGTTTCAACAAAAAGCCACTCCGCCTCAGACAGAGAGTTTAGGAGAAACGGAG TCAAGCACACTGTCTACTGGGCCCCAAATCCGACCCTTGAGATTAGGAAAAGTGGCGCATGAATTGTTGGAAAGA CCTTACAAGATGGACGAATGGGCAGTTTCAACGAGTAGCCTTGATTCGAGTGAGGATGCAGAAGCCAACAAGGAT CAAATCGAAATACCGTTCACGACGCCACGCATAAAGAAAGCGAATACTCTAGGCCTCACTCTACCATGCGATTTG CCCGGGAACTTGACGAAATCTTATGAACCAAGTGCTCTTGAGCCACGGGACAAGGTGGCGCCAGTCAAGTCGAGC CCGAGCAAGAAGAAAACAAAGAGCATATTTGACAACAGAAAGGACACTGTTGCCAAGGATTTTCTTAGCGAGCTC GATGCCAAGATTACCAAAGGAGAAATTGCTAGGCTGACTCAGTTGACGGGCGGTGTCAAGGTAATATGGACCAAG TCACTCAATACGACAGCCGGCAGAGCCAACTGGCGTCGGGAGACGACACAGAGCAGACCAGCAGACGGTACAGCC AAATTGGAGCAAAGGCATCACGCATCAATTGAATTGGCCGAGAAGGTAATCAACGACGAGAGCAAACTATTGAAT GTAGTAGCTCACGAGTTTTGCCACTTGGCCAACTTTATGATAAGTGGCGTCAACAACAGACCGCACGGAGTCGAA TTTCAAGCATGGGCAGCCAAGTGCTCACGAGCTTTTGGAGAGTCCCATGGTATCCATGTGACAACTAGGCACACA TACGATATTGACTTTAAATATGTGTGGAGGTGTACTACTTGCGGCTATGAGTATAAGCGGCACTCGAGAAGTATC AAACCGGGACGACATGGGTGCGGCAACTGCAAAGGCACCCTCGAGCAGATCAAACCAGTACCTCGTGTCGCCAAG GGCGGCGCAACTGGCAGCGCAACTGGCAACCCAAACCAGTATCAAACTTTTATGAAGAAGCACATGAAAATAGTG AGGAGCGAGAACCCAGGCAGCCCTCAGAAAGACTTGATGAAAATGGTGGCTGAACGCTGGGCTCTTGACAAAAAG AAGGCTATGACTGAGAGCATGGCCAAGACTGGTGACGAGACTATTGGCGGCGTTGTTGACCAGATGGAACAAATG ACTCTCAATCAATGA |