© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|636 |
| Gene name | |
| Location | Contig_1159:2154..4177 |
| Strand | + |
| Gene length (bp) | 2023 |
| Transcript length (bp) | 1941 |
| Coding sequence length (bp) | 1941 |
| Protein length (aa) | 647 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03068 | PAD | Protein-arginine deiminase (PAD) | 4.9E-108 | 197 | 646 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9ULW8|PADI3_HUMAN | Protein-arginine deiminase type-3 OS=Homo sapiens GN=PADI3 PE=1 SV=2 | 27 | 646 | 3.0E-36 |
| sp|P20717|PADI2_RAT | Protein-arginine deiminase type-2 OS=Rattus norvegicus GN=Padi2 PE=1 SV=1 | 27 | 646 | 2.0E-35 |
| sp|O02849|PADI3_SHEEP | Protein-arginine deiminase type-3 OS=Ovis aries GN=PADI3 PE=1 SV=1 | 27 | 645 | 8.0E-35 |
| sp|O88807|PADI4_RAT | Protein-arginine deiminase type-4 OS=Rattus norvegicus GN=Padi4 PE=2 SV=1 | 199 | 646 | 2.0E-33 |
| sp|Q9Z184|PADI3_MOUSE | Protein-arginine deiminase type-3 OS=Mus musculus GN=Padi3 PE=1 SV=2 | 47 | 646 | 5.0E-33 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9ULW8|PADI3_HUMAN | Protein-arginine deiminase type-3 OS=Homo sapiens GN=PADI3 PE=1 SV=2 | 27 | 646 | 3.0E-36 |
| sp|P20717|PADI2_RAT | Protein-arginine deiminase type-2 OS=Rattus norvegicus GN=Padi2 PE=1 SV=1 | 27 | 646 | 2.0E-35 |
| sp|O02849|PADI3_SHEEP | Protein-arginine deiminase type-3 OS=Ovis aries GN=PADI3 PE=1 SV=1 | 27 | 645 | 8.0E-35 |
| sp|O88807|PADI4_RAT | Protein-arginine deiminase type-4 OS=Rattus norvegicus GN=Padi4 PE=2 SV=1 | 199 | 646 | 2.0E-33 |
| sp|Q9Z184|PADI3_MOUSE | Protein-arginine deiminase type-3 OS=Mus musculus GN=Padi3 PE=1 SV=2 | 47 | 646 | 5.0E-33 |
| sp|Q9Z183|PADI4_MOUSE | Protein-arginine deiminase type-4 OS=Mus musculus GN=Padi4 PE=2 SV=3 | 15 | 646 | 1.0E-32 |
| sp|Q9UM07|PADI4_HUMAN | Protein-arginine deiminase type-4 OS=Homo sapiens GN=PADI4 PE=1 SV=2 | 15 | 646 | 2.0E-30 |
| sp|Q6TGC4|PADI6_HUMAN | Protein-arginine deiminase type-6 OS=Homo sapiens GN=PADI6 PE=1 SV=3 | 326 | 646 | 4.0E-30 |
| sp|Q9Y2J8|PADI2_HUMAN | Protein-arginine deiminase type-2 OS=Homo sapiens GN=PADI2 PE=1 SV=2 | 27 | 505 | 2.0E-26 |
| sp|Q08642|PADI2_MOUSE | Protein-arginine deiminase type-2 OS=Mus musculus GN=Padi2 PE=1 SV=2 | 198 | 505 | 2.0E-26 |
| sp|O88806|PADI1_RAT | Protein-arginine deiminase type-1 OS=Rattus norvegicus GN=Padi1 PE=2 SV=1 | 20 | 502 | 2.0E-24 |
| sp|P70708|PADI3_RAT | Protein-arginine deiminase type-3 OS=Rattus norvegicus GN=Padi3 PE=2 SV=1 | 47 | 501 | 1.0E-23 |
| sp|Q9Z185|PADI1_MOUSE | Protein-arginine deiminase type-1 OS=Mus musculus GN=Padi1 PE=1 SV=1 | 27 | 502 | 2.0E-23 |
| sp|Q8K3V4|PADI6_MOUSE | Protein-arginine deiminase type-6 OS=Mus musculus GN=Padi6 PE=1 SV=2 | 199 | 646 | 1.0E-22 |
| sp|Q9ULC6|PADI1_HUMAN | Protein-arginine deiminase type-1 OS=Homo sapiens GN=PADI1 PE=2 SV=2 | 27 | 502 | 2.0E-21 |
| sp|P70708|PADI3_RAT | Protein-arginine deiminase type-3 OS=Rattus norvegicus GN=Padi3 PE=2 SV=1 | 566 | 646 | 7.0E-09 |
| sp|Q9ULC6|PADI1_HUMAN | Protein-arginine deiminase type-1 OS=Homo sapiens GN=PADI1 PE=2 SV=2 | 566 | 646 | 3.0E-08 |
| sp|Q9Z185|PADI1_MOUSE | Protein-arginine deiminase type-1 OS=Mus musculus GN=Padi1 PE=1 SV=1 | 566 | 646 | 2.0E-07 |
| sp|O88806|PADI1_RAT | Protein-arginine deiminase type-1 OS=Rattus norvegicus GN=Padi1 PE=2 SV=1 | 566 | 646 | 2.0E-07 |
| sp|Q08642|PADI2_MOUSE | Protein-arginine deiminase type-2 OS=Mus musculus GN=Padi2 PE=1 SV=2 | 566 | 646 | 3.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005509 | calcium ion binding | Yes |
| GO:0005737 | cytoplasm | Yes |
| GO:0004668 | protein-arginine deiminase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0046872 | metal ion binding | No |
| GO:0043169 | cation binding | No |
| GO:0005488 | binding | No |
| GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | No |
| GO:0043167 | ion binding | No |
| GO:0005575 | cellular_component | No |
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|636 MARLGKLFALSIFLTGTVDALVTSDRLSVTILADTNRDGVVDVTGGRDFEDKQNWSLTRGALFLPNLADTDKRCS AQINATTPNRMLDLCHDASDNVLRNEKLLAPVRTVPKPGLPDSATGRLAVENDEAADLVRVFHKTGPGNWTFVHQ EYTFSAQDLRSGLVLGVDGRDVRRPDGWDGRAMLRLTVEDTSDGNEVTDAVMMRVAPVLTHHHGQLVQQVVTSDG VAGGPLLDQKKFVEDLEAVNDQINLFDPMRTLHTPDVWTQDFMEPAYATIPGPSPDGPGGNPGIVGLRIMLRSAQ AYREAGKLAFSDMRSATVGAVQHPGRGSTQDSMGNLETVPPHSFRGRTWPAGRAVMGVHSGQPPLMIPFLQAQEE QAPIEIDTSWLLVGHVDEHMQFLPVDAATSKQGWVMMVADPMAGLQVLRQAQRDGHGGLRAVSRKDMATDDKAAC VPTSTIDEVLALENLTQVQEYCQGAIRRNVDIIKRETGLTDAQVFAVPSLFYWDEPPFIAPASSCSSIKPNQSVS AASSLDQQPGKHLSILEAGVPPEQRLQRRAASGARAMQFGALYPSAINSIVSKARKEVIAPQPWGPVVQGRDVML DAINAAYAKVGFSVRYIDDWSSHHLNMGEVHCGSNTLRDMEAPWWQ* |
| Coding | >OphauG2|636 ATGGCTCGTCTTGGGAAGCTGTTTGCATTGAGTATTTTCTTGACCGGCACAGTTGATGCTCTGGTCACGTCAGAC CGGCTCAGCGTCACTATCCTGGCAGACACCAACCGTGATGGAGTCGTAGACGTGACGGGAGGCCGTGACTTTGAA GATAAGCAGAACTGGTCTCTGACACGAGGCGCCTTGTTTCTGCCCAATCTTGCCGACACGGACAAGCGCTGCTCA GCGCAAATCAACGCCACGACGCCCAACCGCATGCTGGATCTCTGCCACGATGCCTCAGACAATGTCCTGCGCAAC GAAAAGCTTCTGGCTCCGGTACGAACCGTGCCAAAGCCGGGACTGCCCGACTCAGCCACGGGCCGTCTTGCGGTG GAGAATGATGAGGCGGCGGACCTTGTGCGCGTCTTCCACAAGACAGGCCCCGGCAACTGGACTTTTGTGCATCAA GAGTACACTTTTTCGGCCCAAGACTTGCGCTCTGGCCTTGTGCTGGGCGTGGACGGGAGAGACGTGCGGCGGCCG GATGGCTGGGACGGGCGGGCCATGCTTCGGCTCACGGTGGAGGACACCAGCGACGGAAACGAGGTGACAGACGCC GTCATGATGCGCGTGGCTCCCGTCCTGACGCACCACCATGGCCAGCTGGTGCAGCAGGTGGTGACGTCTGACGGG GTCGCTGGCGGGCCGCTGCTGGACCAGAAGAAGTTTGTGGAGGACCTGGAAGCAGTCAATGACCAGATCAACCTG TTTGACCCCATGCGGACGCTACACACGCCCGATGTTTGGACCCAGGACTTTATGGAGCCGGCATATGCCACTATC CCAGGCCCTTCTCCTGATGGCCCCGGCGGCAATCCTGGCATCGTAGGCCTGCGAATCATGCTCAGGTCAGCCCAA GCGTATCGCGAGGCGGGCAAGCTGGCATTTTCCGACATGCGCTCGGCCACGGTGGGCGCCGTCCAGCATCCTGGC CGCGGAAGCACCCAGGACTCCATGGGCAATCTCGAGACGGTGCCGCCGCACAGCTTCAGGGGCCGCACGTGGCCT GCCGGACGCGCCGTCATGGGGGTGCACAGCGGCCAGCCGCCCCTGATGATTCCCTTTCTGCAAGCCCAGGAGGAG CAAGCGCCCATTGAGATTGACACGTCGTGGCTGCTCGTCGGCCACGTCGACGAGCACATGCAGTTTCTGCCCGTC GACGCCGCCACCAGCAAGCAGGGCTGGGTCATGATGGTGGCTGATCCCATGGCTGGGCTCCAGGTGCTGCGCCAG GCCCAGAGGGACGGCCACGGCGGCCTTCGGGCAGTGTCGCGCAAGGACATGGCCACGGACGACAAGGCCGCCTGC GTCCCGACCAGCACCATTGACGAGGTGCTGGCCCTTGAAAACCTGACGCAGGTGCAAGAGTACTGCCAGGGCGCA ATCCGGCGCAATGTCGACATTATCAAGCGCGAGACGGGGCTCACCGACGCCCAAGTCTTTGCTGTGCCTTCGCTG TTTTACTGGGACGAGCCGCCCTTTATCGCCCCGGCCAGCTCGTGCAGCAGCATCAAGCCCAACCAGTCCGTGTCG GCCGCCAGCAGTCTTGACCAGCAGCCCGGAAAGCATCTGTCCATTCTCGAAGCCGGTGTCCCGCCCGAGCAGCGC CTGCAACGACGCGCTGCATCTGGCGCCCGAGCCATGCAGTTTGGCGCTCTCTATCCCAGTGCCATCAACAGCATC GTCAGCAAGGCTCGAAAGGAGGTGATTGCGCCTCAGCCATGGGGGCCCGTGGTCCAAGGCCGCGACGTGATGCTC GACGCCATCAACGCCGCCTATGCAAAGGTGGGATTCAGCGTGCGCTATATTGACGACTGGTCCTCGCATCACCTT AACATGGGCGAGGTGCACTGCGGCTCCAATACCCTGCGAGACATGGAGGCGCCGTGGTGGCAGTAG |
| Transcript | >OphauG2|636 ATGGCTCGTCTTGGGAAGCTGTTTGCATTGAGTATTTTCTTGACCGGCACAGTTGATGCTCTGGTCACGTCAGAC CGGCTCAGCGTCACTATCCTGGCAGACACCAACCGTGATGGAGTCGTAGACGTGACGGGAGGCCGTGACTTTGAA GATAAGCAGAACTGGTCTCTGACACGAGGCGCCTTGTTTCTGCCCAATCTTGCCGACACGGACAAGCGCTGCTCA GCGCAAATCAACGCCACGACGCCCAACCGCATGCTGGATCTCTGCCACGATGCCTCAGACAATGTCCTGCGCAAC GAAAAGCTTCTGGCTCCGGTACGAACCGTGCCAAAGCCGGGACTGCCCGACTCAGCCACGGGCCGTCTTGCGGTG GAGAATGATGAGGCGGCGGACCTTGTGCGCGTCTTCCACAAGACAGGCCCCGGCAACTGGACTTTTGTGCATCAA GAGTACACTTTTTCGGCCCAAGACTTGCGCTCTGGCCTTGTGCTGGGCGTGGACGGGAGAGACGTGCGGCGGCCG GATGGCTGGGACGGGCGGGCCATGCTTCGGCTCACGGTGGAGGACACCAGCGACGGAAACGAGGTGACAGACGCC GTCATGATGCGCGTGGCTCCCGTCCTGACGCACCACCATGGCCAGCTGGTGCAGCAGGTGGTGACGTCTGACGGG GTCGCTGGCGGGCCGCTGCTGGACCAGAAGAAGTTTGTGGAGGACCTGGAAGCAGTCAATGACCAGATCAACCTG TTTGACCCCATGCGGACGCTACACACGCCCGATGTTTGGACCCAGGACTTTATGGAGCCGGCATATGCCACTATC CCAGGCCCTTCTCCTGATGGCCCCGGCGGCAATCCTGGCATCGTAGGCCTGCGAATCATGCTCAGGTCAGCCCAA GCGTATCGCGAGGCGGGCAAGCTGGCATTTTCCGACATGCGCTCGGCCACGGTGGGCGCCGTCCAGCATCCTGGC CGCGGAAGCACCCAGGACTCCATGGGCAATCTCGAGACGGTGCCGCCGCACAGCTTCAGGGGCCGCACGTGGCCT GCCGGACGCGCCGTCATGGGGGTGCACAGCGGCCAGCCGCCCCTGATGATTCCCTTTCTGCAAGCCCAGGAGGAG CAAGCGCCCATTGAGATTGACACGTCGTGGCTGCTCGTCGGCCACGTCGACGAGCACATGCAGTTTCTGCCCGTC GACGCCGCCACCAGCAAGCAGGGCTGGGTCATGATGGTGGCTGATCCCATGGCTGGGCTCCAGGTGCTGCGCCAG GCCCAGAGGGACGGCCACGGCGGCCTTCGGGCAGTGTCGCGCAAGGACATGGCCACGGACGACAAGGCCGCCTGC GTCCCGACCAGCACCATTGACGAGGTGCTGGCCCTTGAAAACCTGACGCAGGTGCAAGAGTACTGCCAGGGCGCA ATCCGGCGCAATGTCGACATTATCAAGCGCGAGACGGGGCTCACCGACGCCCAAGTCTTTGCTGTGCCTTCGCTG TTTTACTGGGACGAGCCGCCCTTTATCGCCCCGGCCAGCTCGTGCAGCAGCATCAAGCCCAACCAGTCCGTGTCG GCCGCCAGCAGTCTTGACCAGCAGCCCGGAAAGCATCTGTCCATTCTCGAAGCCGGTGTCCCGCCCGAGCAGCGC CTGCAACGACGCGCTGCATCTGGCGCCCGAGCCATGCAGTTTGGCGCTCTCTATCCCAGTGCCATCAACAGCATC GTCAGCAAGGCTCGAAAGGAGGTGATTGCGCCTCAGCCATGGGGGCCCGTGGTCCAAGGCCGCGACGTGATGCTC GACGCCATCAACGCCGCCTATGCAAAGGTGGGATTCAGCGTGCGCTATATTGACGACTGGTCCTCGCATCACCTT AACATGGGCGAGGTGCACTGCGGCTCCAATACCCTGCGAGACATGGAGGCGCCGTGGTGGCAGTAG |
| Gene | >OphauG2|636 ATGGCTCGTCTTGGGAAGCTGTTTGCATTGAGTATTTGTCAGTAGTTCTAGTAACACGTTGCCTTGCTCCTCACC ACATCTTGTTCTTCTTGTTGCAGCTTGAACTGACTCTGCTACAGTCTTGACCGGCACAGTTGATGCTCTGGTCAC GTCAGACCGGCTCAGCGTCACTATCCTGGCAGACACCAACCGTGATGGAGTCGTAGACGTGACGGGAGGCCGTGA CTTTGAAGATAAGCAGAACTGGTCTCTGACACGAGGCGCCTTGTTTCTGCCCAATCTTGCCGACACGGACAAGCG CTGCTCAGCGCAAATCAACGCCACGACGCCCAACCGCATGCTGGATCTCTGCCACGATGCCTCAGACAATGTCCT GCGCAACGAAAAGCTTCTGGCTCCGGTACGAACCGTGCCAAAGCCGGGACTGCCCGACTCAGCCACGGGCCGTCT TGCGGTGGAGAATGATGAGGCGGCGGACCTTGTGCGCGTCTTCCACAAGACAGGCCCCGGCAACTGGACTTTTGT GCATCAAGAGTACACTTTTTCGGCCCAAGACTTGCGCTCTGGCCTTGTGCTGGGCGTGGACGGGAGAGACGTGCG GCGGCCGGATGGCTGGGACGGGCGGGCCATGCTTCGGCTCACGGTGGAGGACACCAGCGACGGAAACGAGGTGAC AGACGCCGTCATGATGCGCGTGGCTCCCGTCCTGACGCACCACCATGGCCAGCTGGTGCAGCAGGTGGTGACGTC TGACGGGGTCGCTGGCGGGCCGCTGCTGGACCAGAAGAAGTTTGTGGAGGACCTGGAAGCAGTCAATGACCAGAT CAACCTGTTTGACCCCATGCGGACGCTACACACGCCCGATGTTTGGACCCAGGACTTTATGGAGCCGGCATATGC CACTATCCCAGGCCCTTCTCCTGATGGCCCCGGCGGCAATCCTGGCATCGTAGGCCTGCGAATCATGCTCAGGTC AGCCCAAGCGTATCGCGAGGCGGGCAAGCTGGCATTTTCCGACATGCGCTCGGCCACGGTGGGCGCCGTCCAGCA TCCTGGCCGCGGAAGCACCCAGGACTCCATGGGCAATCTCGAGACGGTGCCGCCGCACAGCTTCAGGGGCCGCAC GTGGCCTGCCGGACGCGCCGTCATGGGGGTGCACAGCGGCCAGCCGCCCCTGATGATTCCCTTTCTGCAAGCCCA GGAGGAGCAAGCGCCCATTGAGATTGACACGTCGTGGCTGCTCGTCGGCCACGTCGACGAGCACATGCAGTTTCT GCCCGTCGACGCCGCCACCAGCAAGCAGGGCTGGGTCATGATGGTGGCTGATCCCATGGCTGGGCTCCAGGTGCT GCGCCAGGCCCAGAGGGACGGCCACGGCGGCCTTCGGGCAGTGTCGCGCAAGGACATGGCCACGGACGACAAGGC CGCCTGCGTCCCGACCAGCACCATTGACGAGGTGCTGGCCCTTGAAAACCTGACGCAGGTGCAAGAGTACTGCCA GGGCGCAATCCGGCGCAATGTCGACATTATCAAGCGCGAGACGGGGCTCACCGACGCCCAAGTCTTTGCTGTGCC TTCGCTGTTTTACTGGGACGAGCCGCCCTTTATCGCCCCGGCCAGCTCGTGCAGCAGCATCAAGCCCAACCAGTC CGTGTCGGCCGCCAGCAGTCTTGACCAGCAGCCCGGAAAGCATCTGTCCATTCTCGAAGCCGGTGTCCCGCCCGA GCAGCGCCTGCAACGACGCGCTGCATCTGGCGCCCGAGCCATGCAGTTTGGCGCTCTCTATCCCAGTGCCATCAA CAGCATCGTCAGCAAGGCTCGAAAGGAGGTGATTGCGCCTCAGCCATGGGGGCCCGTGGTCCAAGGCCGCGACGT GATGCTCGACGCCATCAACGCCGCCTATGCAAAGGTGGGATTCAGCGTGCGCTATATTGACGACTGGTCCTCGCA TCACCTTAACATGGGCGAGGTGCACTGCGGCTCCAATACCCTGCGAGACATGGAGGCGCCGTGGTGGCAGTAG |