Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|63
Gene name
Location	Contig_10:35931..37936
Strand	+
Gene length (bp)	2005
Transcript length (bp)	1941
Coding sequence length (bp)	1941
Protein length (aa)	647

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04157	EAP30	EAP30/Vps36 family	5.1E-37	367	604
PF16988	Vps36-NZF-N	Vacuolar protein sorting 36 NZF-N zinc-finger domain	4.0E-22	134	194
PF11605	Vps36_ESCRT-II	Vacuolar protein sorting protein 36 Vps36	1.9E-21	9	94

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|A5PK00\|VPS36_BOVIN	Vacuolar protein-sorting-associated protein 36 OS=Bos taurus GN=VPS36 PE=2 SV=1	307	619	2.0E-36
sp\|Q06696\|VPS36_YEAST	Vacuolar protein-sorting-associated protein 36 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS36 PE=1 SV=1	6	615	2.0E-36
sp\|P0C0A2\|VPS36_RAT	Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus GN=Vps36 PE=1 SV=1	307	619	3.0E-36
sp\|Q7ZVK4\|VPS36_DANRE	Vacuolar protein-sorting-associated protein 36 OS=Danio rerio GN=vps36 PE=2 SV=1	307	615	4.0E-36
sp\|O43038\|VPS36_SCHPO	Vacuolar protein-sorting-associated protein 36 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps36 PE=3 SV=1	6	626	5.0E-36

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|A5PK00\|VPS36_BOVIN	Vacuolar protein-sorting-associated protein 36 OS=Bos taurus GN=VPS36 PE=2 SV=1	307	619	2.0E-36
sp\|Q06696\|VPS36_YEAST	Vacuolar protein-sorting-associated protein 36 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS36 PE=1 SV=1	6	615	2.0E-36
sp\|P0C0A2\|VPS36_RAT	Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus GN=Vps36 PE=1 SV=1	307	619	3.0E-36
sp\|Q7ZVK4\|VPS36_DANRE	Vacuolar protein-sorting-associated protein 36 OS=Danio rerio GN=vps36 PE=2 SV=1	307	615	4.0E-36
sp\|O43038\|VPS36_SCHPO	Vacuolar protein-sorting-associated protein 36 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps36 PE=3 SV=1	6	626	5.0E-36
sp\|Q6DDF4\|VPS36_XENLA	Vacuolar protein-sorting-associated protein 36 OS=Xenopus laevis GN=vps36 PE=2 SV=1	307	619	1.0E-35
sp\|Q91XD6\|VPS36_MOUSE	Vacuolar protein-sorting-associated protein 36 OS=Mus musculus GN=Vps36 PE=1 SV=1	307	619	1.0E-35
sp\|Q86VN1\|VPS36_HUMAN	Vacuolar protein-sorting-associated protein 36 OS=Homo sapiens GN=VPS36 PE=1 SV=1	307	619	1.0E-34
sp\|Q9FF81\|VPS36_ARATH	Vacuolar protein sorting-associated protein 36 OS=Arabidopsis thaliana GN=VPS36 PE=1 SV=1	360	630	5.0E-29
sp\|Q9VU87\|VPS36_DROME	Vacuolar protein-sorting-associated protein 36 OS=Drosophila melanogaster GN=Vps36 PE=2 SV=2	304	617	1.0E-24
sp\|Q54T18\|VPS36_DICDI	Vacuolar protein-sorting-associated protein 36 OS=Dictyostelium discoideum GN=vps36 PE=3 SV=1	362	609	5.0E-24

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GO

GO Term	Description	Terminal node
GO:0043130	ubiquitin binding	Yes
GO:0032266	phosphatidylinositol-3-phosphate binding	Yes
GO:0003674	molecular_function	No
GO:0005515	protein binding	No
GO:0008289	lipid binding	No
GO:0005488	binding	No
GO:0032182	ubiquitin-like protein binding	No
GO:0005543	phospholipid binding	No
GO:0035091	phosphatidylinositol binding	No
GO:1901981	phosphatidylinositol phosphate binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|63 MLLKNLDLTTALRPSYLPDEVLLFVQDNVGLYQGKFKLPNHQMGQVYLTSHRICYVDQKKPRINSVALDLKDVER YDFYAGFLKSSAKVTIVAKPLKRPGLHPRPLSNASSLSRPSSTSPAPLETGYTSPTDPSKATTATWVCNICTFSN PVPANFEPSAANAHTPLPPCLTCGIKPTLSHVLKAAISHASNRSWYPQGPINTSSLPPPPPPQAPDATEQHARIG HSSNPQPQSESIQNLDASFPCPKCTFSNHPSLLSCEICNTPLISRGVPSVGSAHAIRTQSPSPSIDDKTRVAQTS LDVAESIKISFRGGGEKIFHERLKGAMTQRKWLLQNAPPAPQSIRRVRDGSSDAFSGSRSEGKAKAAGIAGLEQM GISMHKNNEILIGSAFEDLETLMASAKDVIELAERFARQNGGGVSLEENTLLAESASQLGLVTTKDIVGGGGSNS ESLYLSELSRNIAEFVTDDSRGVLKQAGGIITLVDLWAKFNVARGGVELISPTDFAKSVQLWESLKLPVRLRTFR SGVMVVQASDRTDEATIRSLLSWLQDLHEFPPEHDVPWDWRTFGRGVTAHETAERFGWSIGVAEEELLMAEENGA LCRQENIEGLKYWKNYIDTGDVSLPKHEGTLQQEALVKSLRDMGFL*
Coding	>OphauG2\|63 ATGTTGCTCAAGAATCTCGACCTGACCACTGCGCTGCGGCCGTCTTATCTTCCCGACGAAGTGCTTCTATTTGTT CAAGACAATGTCGGTCTATATCAAGGCAAATTCAAGCTTCCAAACCATCAAATGGGCCAAGTTTACTTGACCTCC CATCGCATATGCTATGTCGATCAAAAGAAGCCTCGCATCAACTCGGTAGCTCTAGATCTCAAAGATGTGGAGCGC TACGACTTCTATGCCGGATTCCTCAAATCCTCGGCCAAAGTCACCATTGTCGCCAAGCCTCTAAAACGCCCTGGC CTTCACCCTCGCCCTCTCTCCAACGCCTCTTCTCTCTCTCGGCCCTCCTCAACTTCTCCTGCTCCTCTAGAAACT GGCTACACATCGCCAACAGACCCTTCTAAAGCCACCACTGCCACTTGGGTGTGCAATATTTGCACTTTCTCCAAT CCGGTGCCCGCCAATTTCGAGCCTTCTGCTGCAAATGCACATACGCCTTTGCCTCCATGTCTAACATGCGGCATC AAGCCAACCCTGTCCCACGTTCTCAAGGCTGCCATCAGCCATGCCAGCAACCGATCATGGTATCCCCAAGGCCCC ATCAACACTTCATCTCTTCCACCACCACCACCACCACAAGCTCCCGACGCGACGGAACAGCATGCACGGATTGGC CACTCCTCAAATCCCCAGCCTCAAAGCGAATCTATTCAAAACTTGGATGCCTCTTTTCCATGCCCCAAGTGTACC TTCTCCAATCATCCATCACTATTGTCTTGCGAGATTTGCAACACCCCTTTAATATCTCGGGGAGTTCCTTCAGTC GGCTCAGCTCACGCAATTCGAACTCAATCTCCCAGTCCGAGTATTGATGATAAAACCAGGGTGGCTCAGACTAGT CTCGATGTTGCAGAAAGCATAAAGATTTCATTCCGTGGTGGCGGTGAAAAAATATTTCACGAGAGGTTAAAAGGC GCCATGACACAACGCAAATGGCTACTTCAAAACGCGCCTCCAGCACCTCAAAGCATACGCAGAGTCAGGGATGGC AGTTCAGATGCTTTTTCTGGCTCAAGATCTGAAGGCAAGGCAAAGGCTGCAGGAATCGCAGGCCTTGAACAAATG GGCATAAGCATGCACAAGAACAACGAGATACTCATTGGCAGCGCGTTTGAAGACCTTGAGACATTAATGGCATCC GCAAAAGATGTCATCGAACTAGCTGAACGATTTGCTCGTCAAAACGGGGGTGGCGTATCATTAGAAGAAAACACC CTTTTGGCCGAGTCGGCTAGCCAACTCGGCCTCGTTACCACCAAGGATATTGTCGGAGGAGGTGGCAGCAATTCC GAGTCACTGTACCTTTCGGAGCTCTCCCGTAACATTGCAGAGTTTGTCACTGACGACTCAAGAGGCGTTTTGAAA CAAGCCGGAGGCATCATCACGCTGGTCGACCTATGGGCCAAGTTTAACGTCGCACGGGGCGGCGTCGAGCTTATT AGCCCCACGGATTTCGCCAAGTCTGTTCAACTGTGGGAGAGTCTCAAGTTGCCAGTGCGGTTACGCACCTTTCGC AGTGGTGTCATGGTGGTGCAGGCTAGCGACCGTACCGATGAGGCAACTATACGCTCCCTGCTTTCCTGGCTTCAG GACTTGCACGAATTCCCCCCTGAGCACGACGTGCCTTGGGACTGGCGAACCTTTGGGCGTGGCGTTACGGCCCAT GAAACAGCTGAGCGCTTTGGTTGGAGTATTGGCGTAGCTGAAGAAGAGCTGCTCATGGCAGAGGAAAATGGCGCG CTGTGCCGCCAAGAGAATATTGAAGGTCTCAAGTATTGGAAGAATTACATTGATACGGGCGACGTGTCGCTGCCA AAGCACGAGGGTACACTCCAGCAGGAGGCCCTTGTCAAATCACTTCGGGACATGGGATTTCTATAG
Transcript	>OphauG2\|63 ATGTTGCTCAAGAATCTCGACCTGACCACTGCGCTGCGGCCGTCTTATCTTCCCGACGAAGTGCTTCTATTTGTT CAAGACAATGTCGGTCTATATCAAGGCAAATTCAAGCTTCCAAACCATCAAATGGGCCAAGTTTACTTGACCTCC CATCGCATATGCTATGTCGATCAAAAGAAGCCTCGCATCAACTCGGTAGCTCTAGATCTCAAAGATGTGGAGCGC TACGACTTCTATGCCGGATTCCTCAAATCCTCGGCCAAAGTCACCATTGTCGCCAAGCCTCTAAAACGCCCTGGC CTTCACCCTCGCCCTCTCTCCAACGCCTCTTCTCTCTCTCGGCCCTCCTCAACTTCTCCTGCTCCTCTAGAAACT GGCTACACATCGCCAACAGACCCTTCTAAAGCCACCACTGCCACTTGGGTGTGCAATATTTGCACTTTCTCCAAT CCGGTGCCCGCCAATTTCGAGCCTTCTGCTGCAAATGCACATACGCCTTTGCCTCCATGTCTAACATGCGGCATC AAGCCAACCCTGTCCCACGTTCTCAAGGCTGCCATCAGCCATGCCAGCAACCGATCATGGTATCCCCAAGGCCCC ATCAACACTTCATCTCTTCCACCACCACCACCACCACAAGCTCCCGACGCGACGGAACAGCATGCACGGATTGGC CACTCCTCAAATCCCCAGCCTCAAAGCGAATCTATTCAAAACTTGGATGCCTCTTTTCCATGCCCCAAGTGTACC TTCTCCAATCATCCATCACTATTGTCTTGCGAGATTTGCAACACCCCTTTAATATCTCGGGGAGTTCCTTCAGTC GGCTCAGCTCACGCAATTCGAACTCAATCTCCCAGTCCGAGTATTGATGATAAAACCAGGGTGGCTCAGACTAGT CTCGATGTTGCAGAAAGCATAAAGATTTCATTCCGTGGTGGCGGTGAAAAAATATTTCACGAGAGGTTAAAAGGC GCCATGACACAACGCAAATGGCTACTTCAAAACGCGCCTCCAGCACCTCAAAGCATACGCAGAGTCAGGGATGGC AGTTCAGATGCTTTTTCTGGCTCAAGATCTGAAGGCAAGGCAAAGGCTGCAGGAATCGCAGGCCTTGAACAAATG GGCATAAGCATGCACAAGAACAACGAGATACTCATTGGCAGCGCGTTTGAAGACCTTGAGACATTAATGGCATCC GCAAAAGATGTCATCGAACTAGCTGAACGATTTGCTCGTCAAAACGGGGGTGGCGTATCATTAGAAGAAAACACC CTTTTGGCCGAGTCGGCTAGCCAACTCGGCCTCGTTACCACCAAGGATATTGTCGGAGGAGGTGGCAGCAATTCC GAGTCACTGTACCTTTCGGAGCTCTCCCGTAACATTGCAGAGTTTGTCACTGACGACTCAAGAGGCGTTTTGAAA CAAGCCGGAGGCATCATCACGCTGGTCGACCTATGGGCCAAGTTTAACGTCGCACGGGGCGGCGTCGAGCTTATT AGCCCCACGGATTTCGCCAAGTCTGTTCAACTGTGGGAGAGTCTCAAGTTGCCAGTGCGGTTACGCACCTTTCGC AGTGGTGTCATGGTGGTGCAGGCTAGCGACCGTACCGATGAGGCAACTATACGCTCCCTGCTTTCCTGGCTTCAG GACTTGCACGAATTCCCCCCTGAGCACGACGTGCCTTGGGACTGGCGAACCTTTGGGCGTGGCGTTACGGCCCAT GAAACAGCTGAGCGCTTTGGTTGGAGTATTGGCGTAGCTGAAGAAGAGCTGCTCATGGCAGAGGAAAATGGCGCG CTGTGCCGCCAAGAGAATATTGAAGGTCTCAAGTATTGGAAGAATTACATTGATACGGGCGACGTGTCGCTGCCA AAGCACGAGGGTACACTCCAGCAGGAGGCCCTTGTCAAATCACTTCGGGACATGGGATTTCTATAG
Gene	>OphauG2\|63 ATGTTGCTCAAGAATCTCGACCTGACCACTGCGCTGCGGCCGTCTTATCTTCCCGACGAAGTGCTTCTATTTGTT CAAGACAATGTCGGTCTATATCAAGGGTATCTTTTCCGCCCTTGGAATCACTGCCATCAAAGCCATGCTCCCGCT AACTGTTGTCGACAGCAAATTCAAGCTTCCAAACCATCAAATGGGCCAAGTTTACTTGACCTCCCATCGCATATG CTATGTCGATCAAAAGAAGCCTCGCATCAACTCGGTAGCTCTAGATCTCAAAGATGTGGAGCGCTACGACTTCTA TGCCGGATTCCTCAAATCCTCGGCCAAAGTCACCATTGTCGCCAAGCCTCTAAAACGCCCTGGCCTTCACCCTCG CCCTCTCTCCAACGCCTCTTCTCTCTCTCGGCCCTCCTCAACTTCTCCTGCTCCTCTAGAAACTGGCTACACATC GCCAACAGACCCTTCTAAAGCCACCACTGCCACTTGGGTGTGCAATATTTGCACTTTCTCCAATCCGGTGCCCGC CAATTTCGAGCCTTCTGCTGCAAATGCACATACGCCTTTGCCTCCATGTCTAACATGCGGCATCAAGCCAACCCT GTCCCACGTTCTCAAGGCTGCCATCAGCCATGCCAGCAACCGATCATGGTATCCCCAAGGCCCCATCAACACTTC ATCTCTTCCACCACCACCACCACCACAAGCTCCCGACGCGACGGAACAGCATGCACGGATTGGCCACTCCTCAAA TCCCCAGCCTCAAAGCGAATCTATTCAAAACTTGGATGCCTCTTTTCCATGCCCCAAGTGTACCTTCTCCAATCA TCCATCACTATTGTCTTGCGAGATTTGCAACACCCCTTTAATATCTCGGGGAGTTCCTTCAGTCGGCTCAGCTCA CGCAATTCGAACTCAATCTCCCAGTCCGAGTATTGATGATAAAACCAGGGTGGCTCAGACTAGTCTCGATGTTGC AGAAAGCATAAAGATTTCATTCCGTGGTGGCGGTGAAAAAATATTTCACGAGAGGTTAAAAGGCGCCATGACACA ACGCAAATGGCTACTTCAAAACGCGCCTCCAGCACCTCAAAGCATACGCAGAGTCAGGGATGGCAGTTCAGATGC TTTTTCTGGCTCAAGATCTGAAGGCAAGGCAAAGGCTGCAGGAATCGCAGGCCTTGAACAAATGGGCATAAGCAT GCACAAGAACAACGAGATACTCATTGGCAGCGCGTTTGAAGACCTTGAGACATTAATGGCATCCGCAAAAGATGT CATCGAACTAGCTGAACGATTTGCTCGTCAAAACGGGGGTGGCGTATCATTAGAAGAAAACACCCTTTTGGCCGA GTCGGCTAGCCAACTCGGCCTCGTTACCACCAAGGATATTGTCGGAGGAGGTGGCAGCAATTCCGAGTCACTGTA CCTTTCGGAGCTCTCCCGTAACATTGCAGAGTTTGTCACTGACGACTCAAGAGGCGTTTTGAAACAAGCCGGAGG CATCATCACGCTGGTCGACCTATGGGCCAAGTTTAACGTCGCACGGGGCGGCGTCGAGCTTATTAGCCCCACGGA TTTCGCCAAGTCTGTTCAACTGTGGGAGAGTCTCAAGTTGCCAGTGCGGTTACGCACCTTTCGCAGTGGTGTCAT GGTGGTGCAGGCTAGCGACCGTACCGATGAGGCAACTATACGCTCCCTGCTTTCCTGGCTTCAGGACTTGCACGA ATTCCCCCCTGAGCACGACGTGCCTTGGGACTGGCGAACCTTTGGGCGTGGCGTTACGGCCCATGAAACAGCTGA GCGCTTTGGTTGGAGTATTGGCGTAGCTGAAGAAGAGCTGCTCATGGCAGAGGAAAATGGCGCGCTGTGCCGCCA AGAGAATATTGAAGGTCTCAAGTATTGGAAGAATTACATTGATACGGGCGACGTGTCGCTGCCAAAGCACGAGGG TACACTCCAGCAGGAGGCCCTTGTCAAATCACTTCGGGACATGGGATTTCTATAG

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