© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|6199 |
| Gene name | |
| Location | Contig_619:651..1264 |
| Strand | - |
| Gene length (bp) | 613 |
| Transcript length (bp) | 549 |
| Coding sequence length (bp) | 549 |
| Protein length (aa) | 183 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04444 | Dioxygenase_N | Catechol dioxygenase N terminus | 1.8E-23 | 88 | 160 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P86029|HQD2_CANAL | Catechol 1,2-dioxygenase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HQD2 PE=1 SV=1 | 75 | 176 | 9.0E-21 |
| sp|Q6F4M7|NPCC_RHOOP | Hydroxyquinol 1,2-dioxygenase OS=Rhodococcus opacus GN=npcC PE=2 SV=1 | 79 | 174 | 6.0E-10 |
| sp|Q5PXQ6|CHQB_NOCSI | Hydroxyquinol 1,2-dioxygenase OS=Nocardioides simplex GN=chqB PE=1 SV=1 | 72 | 174 | 3.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0018576 | catechol 1,2-dioxygenase activity | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0009712 | catechol-containing compound metabolic process | Yes |
| GO:0009987 | cellular process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0043167 | ion binding | No |
| GO:0051213 | dioxygenase activity | No |
| GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | No |
| GO:0046872 | metal ion binding | No |
| GO:0018958 | phenol-containing compound metabolic process | No |
| GO:0019114 | catechol dioxygenase activity | No |
| GO:0008150 | biological_process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | No |
| GO:0005488 | binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:1901615 | organic hydroxy compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0043169 | cation binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 40 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6199 MTQAAMTQADMTQAKRQMRSSRAASSLVAQLLYLAALILQELCRLALWAMHKTLGFNRVKSSGAAPRAEISDSDF TRQVVASTGPKADERLRHVMGLVIRHAHDLVREAQVTTDELFAALDMVNWAGRMSNDRRNETQLLCDVLGIESLV DAVTWAQNSGGGATTPSAVLGPFWRPCLCMAE* |
| Coding | >OphauG2|6199 ATGACGCAGGCAGCCATGACGCAGGCAGACATGACGCAAGCAAAGAGGCAAATGCGCAGCAGCCGTGCCGCGTCG TCCCTCGTCGCTCAGCTCTTGTATCTTGCAGCGCTTATACTACAGGAGCTGTGCCGACTCGCCTTGTGGGCTATG CATAAGACGCTGGGATTCAACAGGGTCAAGAGCAGCGGTGCAGCCCCGAGGGCAGAAATCAGCGACTCTGACTTT ACACGGCAGGTGGTGGCTTCTACGGGCCCCAAGGCGGACGAGCGGCTTCGGCATGTCATGGGGCTGGTCATCAGG CATGCGCACGACTTGGTGCGCGAGGCCCAAGTGACGACGGACGAGCTGTTTGCGGCGTTGGACATGGTCAACTGG GCAGGGCGCATGAGCAATGACCGGCGCAACGAGACGCAGCTCCTGTGCGATGTGCTGGGCATCGAGTCGCTGGTG GATGCGGTGACGTGGGCGCAAAACTCTGGGGGCGGGGCGACGACGCCGTCGGCGGTGCTGGGGCCGTTTTGGAGG CCGTGTTTGTGCATGGCAGAGTGA |
| Transcript | >OphauG2|6199 ATGACGCAGGCAGCCATGACGCAGGCAGACATGACGCAAGCAAAGAGGCAAATGCGCAGCAGCCGTGCCGCGTCG TCCCTCGTCGCTCAGCTCTTGTATCTTGCAGCGCTTATACTACAGGAGCTGTGCCGACTCGCCTTGTGGGCTATG CATAAGACGCTGGGATTCAACAGGGTCAAGAGCAGCGGTGCAGCCCCGAGGGCAGAAATCAGCGACTCTGACTTT ACACGGCAGGTGGTGGCTTCTACGGGCCCCAAGGCGGACGAGCGGCTTCGGCATGTCATGGGGCTGGTCATCAGG CATGCGCACGACTTGGTGCGCGAGGCCCAAGTGACGACGGACGAGCTGTTTGCGGCGTTGGACATGGTCAACTGG GCAGGGCGCATGAGCAATGACCGGCGCAACGAGACGCAGCTCCTGTGCGATGTGCTGGGCATCGAGTCGCTGGTG GATGCGGTGACGTGGGCGCAAAACTCTGGGGGCGGGGCGACGACGCCGTCGGCGGTGCTGGGGCCGTTTTGGAGG CCGTGTTTGTGCATGGCAGAGTGA |
| Gene | >OphauG2|6199 ATGACGCAGGCAGCCATGACGCAGGCAGACATGACGCAAGCAAAGAGGCAAATGCGCAGCAGCCGTGCCGCGTCG TCCCTCGTCGCTCAGCTCTTGTATCTTGCAGCGCTTATACTACAGGAGCTGTGCCGACTCGCCTTGTGGGCTATG CATAAGACGCTGGGATTCAACAGGGTCAAGAGCAGCGGTGCAGCCCCGAGGGCAGAAATCAGCGACTCTGACTTT ACACGGCAGGTGGTGGCTTCTACGGGCCCCAAGGCGGACGAGCGGCTTCGGCATGTCATGGGGCTGGTCATCAGG CATGCGCACGACTTGGTGCGCGAGGCCCAAGTGACGACGGACGAGCTGTTTGCGGCGTTGGACATGGTCAACTGG GCAGGGCGCATGAGCAATGACCGGCGCAACGAGACGCAGCTCCTGTGCGATGTGCTGGGCATCGAGTCGCTGGTG GATGCGGTGACGTGGGCGCAAAACTCTGGGGGCGGGGCGACGACGCCGTCGGCGGTGCTGGGGCCGTTTTGGAGG TCAGACGCGCCTTTGAGGGCCAAGGGCAGCTCCATCAGCTTCAATCCGCGGGCCGACGCGCAGGCCGTGTTTGTG CATGGCAGAGTGA |