© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|6177 |
| Gene name | |
| Location | Contig_613:3646..5344 |
| Strand | + |
| Gene length (bp) | 1698 |
| Transcript length (bp) | 1563 |
| Coding sequence length (bp) | 1563 |
| Protein length (aa) | 521 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01546 | Peptidase_M20 | Peptidase family M20/M25/M40 | 2.0E-19 | 129 | 516 |
| PF07687 | M20_dimer | Peptidase dimerisation domain | 2.3E-08 | 254 | 402 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P27614|CBPS_YEAST | Carboxypeptidase S OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CPS1 PE=1 SV=2 | 23 | 510 | 1.0E-76 |
| sp|O13968|YE48_SCHPO | Uncharacterized carboxypeptidase C24C9.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24C9.08 PE=3 SV=1 | 47 | 389 | 7.0E-71 |
| sp|P0C155|CBPS2_YEAST | Putative carboxypeptidase YOL153C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL153C PE=5 SV=1 | 26 | 410 | 3.0E-61 |
| sp|Q8C165|P20D1_MOUSE | Probable carboxypeptidase PM20D1 OS=Mus musculus GN=Pm20d1 PE=1 SV=1 | 2 | 408 | 1.0E-39 |
| sp|Q2T9M7|P20D1_BOVIN | Probable carboxypeptidase PM20D1 OS=Bos taurus GN=PM20D1 PE=2 SV=1 | 47 | 406 | 5.0E-37 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P27614|CBPS_YEAST | Carboxypeptidase S OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CPS1 PE=1 SV=2 | 23 | 510 | 1.0E-76 |
| sp|O13968|YE48_SCHPO | Uncharacterized carboxypeptidase C24C9.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24C9.08 PE=3 SV=1 | 47 | 389 | 7.0E-71 |
| sp|P0C155|CBPS2_YEAST | Putative carboxypeptidase YOL153C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL153C PE=5 SV=1 | 26 | 410 | 3.0E-61 |
| sp|Q8C165|P20D1_MOUSE | Probable carboxypeptidase PM20D1 OS=Mus musculus GN=Pm20d1 PE=1 SV=1 | 2 | 408 | 1.0E-39 |
| sp|Q2T9M7|P20D1_BOVIN | Probable carboxypeptidase PM20D1 OS=Bos taurus GN=PM20D1 PE=2 SV=1 | 47 | 406 | 5.0E-37 |
| sp|Q55FR8|CBPS2_DICDI | Probable carboxypeptidase S-like 2 OS=Dictyostelium discoideum GN=DDB_G0267984 PE=3 SV=1 | 58 | 408 | 3.0E-34 |
| sp|Q5ZL18|P20D1_CHICK | Probable carboxypeptidase PM20D1 OS=Gallus gallus GN=PM20D1 PE=2 SV=1 | 7 | 408 | 9.0E-33 |
| sp|Q08BB2|P2012_DANRE | Probable carboxypeptidase PM20D1.2 OS=Danio rerio GN=pm20d1.2 PE=2 SV=1 | 57 | 408 | 3.0E-32 |
| sp|Q08BT9|P20D1_XENTR | Probable carboxypeptidase PM20D1 OS=Xenopus tropicalis GN=pm20d1 PE=2 SV=1 | 54 | 397 | 2.0E-31 |
| sp|Q6GTS8|P20D1_HUMAN | Probable carboxypeptidase PM20D1 OS=Homo sapiens GN=PM20D1 PE=2 SV=3 | 47 | 406 | 7.0E-31 |
| sp|Q55DL1|CBPS1_DICDI | Probable carboxypeptidase S-like 1 OS=Dictyostelium discoideum GN=DDB_G0270582 PE=3 SV=1 | 60 | 379 | 3.0E-30 |
| sp|Q32LT9|P2011_DANRE | Probable carboxypeptidase PM20D1.1 OS=Danio rerio GN=pm20d1.1 PE=2 SV=1 | 57 | 393 | 4.0E-28 |
| sp|P37111|ACY1_PIG | Aminoacylase-1 OS=Sus scrofa GN=ACY1 PE=1 SV=2 | 115 | 237 | 8.0E-09 |
| sp|Q6AYS7|ACY1A_RAT | Aminoacylase-1A OS=Rattus norvegicus GN=Acy1a PE=1 SV=1 | 115 | 238 | 3.0E-08 |
| sp|Q99JW2|ACY1_MOUSE | Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1 | 115 | 238 | 4.0E-08 |
| sp|Q5RFB0|ACY1_PONAB | Aminoacylase-1 OS=Pongo abelii GN=ACY1 PE=2 SV=2 | 115 | 238 | 5.0E-08 |
| sp|Q03154|ACY1_HUMAN | Aminoacylase-1 OS=Homo sapiens GN=ACY1 PE=1 SV=1 | 115 | 238 | 6.0E-08 |
| sp|A4VMY9|DAPE_PSEU5 | Succinyl-diaminopimelate desuccinylase OS=Pseudomonas stutzeri (strain A1501) GN=dapE PE=3 SV=1 | 109 | 222 | 9.0E-08 |
| sp|Q6PTT0|ACY1B_RAT | Aminoacylase-1B OS=Rattus norvegicus GN=Acy1b PE=1 SV=1 | 115 | 238 | 1.0E-07 |
| sp|Q31G37|DAPE_THICR | Succinyl-diaminopimelate desuccinylase OS=Thiomicrospira crunogena (strain XCL-2) GN=dapE PE=3 SV=1 | 127 | 246 | 2.0E-07 |
| sp|Q1R039|DAPE_CHRSD | Succinyl-diaminopimelate desuccinylase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dapE PE=3 SV=1 | 112 | 222 | 3.0E-07 |
| sp|Q55DP8|ACY1_DICDI | Aminoacylase-1 OS=Dictyostelium discoideum GN=acy1 PE=2 SV=1 | 106 | 237 | 1.0E-06 |
| sp|Q9I4H5|DAPE_PSEAE | Succinyl-diaminopimelate desuccinylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=dapE PE=3 SV=1 | 127 | 222 | 1.0E-06 |
| sp|B7UX27|DAPE_PSEA8 | Succinyl-diaminopimelate desuccinylase OS=Pseudomonas aeruginosa (strain LESB58) GN=dapE PE=3 SV=1 | 127 | 222 | 1.0E-06 |
| sp|Q02IY2|DAPE_PSEAB | Succinyl-diaminopimelate desuccinylase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dapE PE=3 SV=1 | 127 | 222 | 3.0E-06 |
| sp|Q6VE94|DAPE_PSESY | Succinyl-diaminopimelate desuccinylase OS=Pseudomonas syringae pv. syringae GN=dapE PE=3 SV=1 | 127 | 222 | 4.0E-06 |
| sp|A6V936|DAPE_PSEA7 | Succinyl-diaminopimelate desuccinylase OS=Pseudomonas aeruginosa (strain PA7) GN=dapE PE=3 SV=1 | 127 | 222 | 5.0E-06 |
| sp|A1K719|DAPE_AZOSB | Succinyl-diaminopimelate desuccinylase OS=Azoarcus sp. (strain BH72) GN=dapE PE=3 SV=1 | 111 | 246 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6177 MAWATLLALLASSASAALASLGHDFQCDLPDPVDPDSDGLPSANQLFSSDAALKLQIERLRASVQIATVCYDDMG NYGDDERWKPFYQLHEMLDQTYPKLHQHTKRETVNDIGLVYTIQGSDSDLKPILLLAHQDVVPVESQESEAWEHP PFDGFYDSDGWLHGRGAVDKSSLTSIMSAFEALFAADADWKPERTMVLAFGFDEECGGLRGAPSISEHLKQRYGQ DGIAVILDEGGAGLNTLGDTLWALPAVYEKGYLDVWFDLSVQGGPSGTPPPNTAIGIMSEIVTGLEQDPFQPSIP RDGPIHHQLICQARYSPDAVPQLTTAIYNGDLDLAATLMANISRHTQSAVQTTRAIDYMAGGSKINSLPEYVTLG INHRFTPQDNKYQVMHDIAHKSRQVLADHDITLVPFEDDNNYHAWVKAHGLESSRWPPSYPDHPYPGRPYPGHPP FQPPFHPPHQRPYPRPSPDIPHWRPDYHGKLTLSTKRSFDPSPVSPTQGPVWDLFAGTLRHTLGAAHQTV* |
| Coding | >OphauG2|6177 ATGGCCTGGGCCACGCTTCTTGCTCTGCTGGCCAGCAGCGCCAGCGCCGCCTTGGCCTCTCTTGGCCATGACTTC CAGTGCGACTTGCCAGACCCCGTCGACCCAGACTCGGACGGCCTCCCCTCTGCCAACCAGCTCTTCTCGTCCGAC GCGGCCCTCAAGCTCCAGATTGAGCGTCTGCGTGCCTCGGTCCAGATCGCCACCGTGTGCTACGATGACATGGGC AACTATGGTGATGACGAGCGCTGGAAGCCCTTTTACCAGCTCCACGAGATGCTGGACCAGACGTATCCCAAGCTA CACCAACATACCAAGCGGGAAACGGTTAATGACATCGGCCTCGTCTACACCATTCAAGGCTCCGACTCCGACCTC AAGCCCATCCTCCTCCTGGCCCATCAGGACGTAGTCCCCGTTGAATCTCAAGAGTCCGAGGCTTGGGAACATCCC CCCTTTGACGGCTTCTATGACTCGGACGGCTGGCTCCATGGCCGCGGCGCCGTCGACAAGTCGAGTCTGACGTCA ATCATGTCCGCCTTTGAGGCTCTCTTCGCCGCCGACGCCGACTGGAAGCCCGAGCGAACCATGGTCTTGGCCTTT GGCTTCGACGAGGAGTGTGGTGGCTTGCGCGGCGCCCCTTCGATTTCAGAGCACCTCAAGCAGCGCTACGGCCAA GATGGAATTGCCGTCATCCTGGACGAGGGCGGCGCCGGACTCAACACCCTCGGCGACACCCTCTGGGCCTTGCCC GCCGTCTACGAAAAGGGCTATCTCGACGTCTGGTTCGACCTCAGTGTCCAAGGCGGCCCCAGTGGCACGCCCCCG CCCAACACTGCCATTGGCATCATGTCTGAAATCGTCACAGGGTTGGAACAGGATCCCTTTCAGCCCAGCATTCCT CGCGACGGCCCCATCCATCATCAACTCATCTGCCAGGCCCGCTACTCGCCCGACGCCGTCCCCCAGCTCACAACC GCCATCTACAACGGCGACCTCGATCTCGCCGCCACCCTCATGGCCAACATCAGCCGCCACACCCAGTCCGCCGTC CAAACCACCCGCGCCATTGACTACATGGCCGGCGGCTCCAAAATCAACTCCCTCCCCGAATACGTCACCCTGGGC ATAAATCACCGCTTCACGCCCCAGGACAACAAGTACCAAGTCATGCACGACATAGCCCACAAGTCTCGCCAAGTC CTTGCAGACCATGACATTACCCTCGTGCCCTTTGAAGACGACAACAACTATCATGCATGGGTCAAGGCCCACGGC CTCGAATCCTCGCGCTGGCCGCCGTCCTATCCCGACCATCCTTACCCAGGCCGCCCATACCCAGGCCATCCGCCT TTCCAGCCGCCCTTTCACCCTCCCCATCAACGCCCCTATCCGCGCCCGAGCCCCGACATCCCTCATTGGCGCCCC GACTACCACGGCAAACTCACCCTGTCCACCAAGAGAAGCTTCGACCCGTCCCCCGTTTCGCCTACACAAGGCCCC GTCTGGGACTTGTTTGCCGGAACTCTTCGCCACACCCTTGGAGCCGCCCATCAAACAGTCTGA |
| Transcript | >OphauG2|6177 ATGGCCTGGGCCACGCTTCTTGCTCTGCTGGCCAGCAGCGCCAGCGCCGCCTTGGCCTCTCTTGGCCATGACTTC CAGTGCGACTTGCCAGACCCCGTCGACCCAGACTCGGACGGCCTCCCCTCTGCCAACCAGCTCTTCTCGTCCGAC GCGGCCCTCAAGCTCCAGATTGAGCGTCTGCGTGCCTCGGTCCAGATCGCCACCGTGTGCTACGATGACATGGGC AACTATGGTGATGACGAGCGCTGGAAGCCCTTTTACCAGCTCCACGAGATGCTGGACCAGACGTATCCCAAGCTA CACCAACATACCAAGCGGGAAACGGTTAATGACATCGGCCTCGTCTACACCATTCAAGGCTCCGACTCCGACCTC AAGCCCATCCTCCTCCTGGCCCATCAGGACGTAGTCCCCGTTGAATCTCAAGAGTCCGAGGCTTGGGAACATCCC CCCTTTGACGGCTTCTATGACTCGGACGGCTGGCTCCATGGCCGCGGCGCCGTCGACAAGTCGAGTCTGACGTCA ATCATGTCCGCCTTTGAGGCTCTCTTCGCCGCCGACGCCGACTGGAAGCCCGAGCGAACCATGGTCTTGGCCTTT GGCTTCGACGAGGAGTGTGGTGGCTTGCGCGGCGCCCCTTCGATTTCAGAGCACCTCAAGCAGCGCTACGGCCAA GATGGAATTGCCGTCATCCTGGACGAGGGCGGCGCCGGACTCAACACCCTCGGCGACACCCTCTGGGCCTTGCCC GCCGTCTACGAAAAGGGCTATCTCGACGTCTGGTTCGACCTCAGTGTCCAAGGCGGCCCCAGTGGCACGCCCCCG CCCAACACTGCCATTGGCATCATGTCTGAAATCGTCACAGGGTTGGAACAGGATCCCTTTCAGCCCAGCATTCCT CGCGACGGCCCCATCCATCATCAACTCATCTGCCAGGCCCGCTACTCGCCCGACGCCGTCCCCCAGCTCACAACC GCCATCTACAACGGCGACCTCGATCTCGCCGCCACCCTCATGGCCAACATCAGCCGCCACACCCAGTCCGCCGTC CAAACCACCCGCGCCATTGACTACATGGCCGGCGGCTCCAAAATCAACTCCCTCCCCGAATACGTCACCCTGGGC ATAAATCACCGCTTCACGCCCCAGGACAACAAGTACCAAGTCATGCACGACATAGCCCACAAGTCTCGCCAAGTC CTTGCAGACCATGACATTACCCTCGTGCCCTTTGAAGACGACAACAACTATCATGCATGGGTCAAGGCCCACGGC CTCGAATCCTCGCGCTGGCCGCCGTCCTATCCCGACCATCCTTACCCAGGCCGCCCATACCCAGGCCATCCGCCT TTCCAGCCGCCCTTTCACCCTCCCCATCAACGCCCCTATCCGCGCCCGAGCCCCGACATCCCTCATTGGCGCCCC GACTACCACGGCAAACTCACCCTGTCCACCAAGAGAAGCTTCGACCCGTCCCCCGTTTCGCCTACACAAGGCCCC GTCTGGGACTTGTTTGCCGGAACTCTTCGCCACACCCTTGGAGCCGCCCATCAAACAGTCTGA |
| Gene | >OphauG2|6177 ATGGCCTGGGCCACGCTTCTTGCTCTGCTGGCCAGCAGCGCCAGCGCCGCCTTGGCCTCTCTTGGCCATGACTTC CAGTGCGACTTGCCAGACCCCGTCGACCCAGACTCGGACGGCCTCCCCTCTGCCAACCAGCTCTTCTCGTCCGAC GCGGCCCTCAAGCTCCAGATTGAGCGTCTGCGTGCCTCGGTCCAGATCGCCACCGTGTGCTACGATGACATGGGC AACTATGGTGATGACGAGCGCTGGAAGCCCTTTTACCAGCTCCACGAGATGCTGGACCAGACGTATCCCAAGCTG TATGTATTTGAGCCATTTTCCTCGTCTCTTTGCTTCGTCTCTCGCCCAAAGCTAAAGTTAACCAACCCAACTACT TGCTAGACACCAACATACCAAGCGGGAAACGGTTAATGACATCGGCCTCGTCTACACCATTCAAGGCTCCGACTC CGACCTCAAGCCCATCCTCCTCCTGGCCCATCAGGACGTAGTCCCCGTTGAATCTCAAGAGTCCGAGGCTTGGGA ACATCCCCCCTTTGACGGCTTCTATGACTCGGACGGCTGGCTCCATGGCCGCGGCGCCGTCGACAAGTCGAGTCT GACGTCAATCATGTCCGCCTTTGAGGCTCTCTTCGCCGCCGACGCCGACTGGAAGCCCGAGCGAACCATGGTCTT GGCCTTTGGCTTCGACGAGGAGTGTGGTGGCTTGCGCGGCGCCCCTTCGATTTCAGAGCACCTCAAGCAGCGCTA CGGCCAAGATGGAATTGCCGTCATCCTGGACGAGGGCGGCGCCGGACTCAACACCCTCGGCGACACCCTCTGGGC CTTGCCCGCCGTCTACGAAAAGGGCTATCTCGACGTCTGGTTCGACCTCAGTGTCCAAGGCGGCCCCAGTGGCAC GCCCCCGCCCAACACTGCCATTGGCATCATGTCTGAAATCGTCACAGGGTTGGAACAGGATCCCTTTCAGCCCAG CATTCCTCGCGACGGCCCCATCCATCATCAACTCATCTGCCAGGCCCGCTACTCGCCCGACGCCGTCCCCCAGCT CACAACCGCCATCTACAACGGCGACCTCGATCTCGCCGCCACCCTCATGGCCAACATCAGCCGCCACACCCAGTC CGCCGTCCAAACCACCCGCGCCATTGACTACATGGCCGGCGGCTCCAAAATCAACTCCCTCCCCGAATACGTCAC CCTGGGCATAAATCACCGCTTCACGCCCCAGGACAACAAGTACCAAGTCATGCACGACATAGCCCACAAGTCTCG CCAAGTCCTTGCAGACCATGACATTACCCTCGTGCCCTTTGAAGACGACAACAACTATCATGCATGGGTCAAGGC CCACGGCCTCGAATCCTCGCGCTGGCCGCCGTCCTATCCCGACCATCCTTACCCAGGCCGCCCATACCCAGGCCA TCCGCCTTTCCAGCCGCCCTTTCACCCTCCCCATCAACGCCCCTATCCGCGCCCGAGCCCCGACATCCCTCATTG GCGCCCCGACTACCACGGCAAACTCACCCTGTCCACCAAGAGAAGCTTCGACCCGTCCCCCGTTTCGCCTACACA AGGCCCCGTCTGGGACTTGTTTGCCGGAACTCTTCGCCACACCCTTGGAGCCGCCCATCAAACAGTCGTCACAGC CCCAGCCACCATGCCCGGAAACACTGACACGAGGCATTTTATCAGTGA |