© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6168 |
| Gene name | |
| Location | Contig_610:319..1243 |
| Strand | - |
| Gene length (bp) | 924 |
| Transcript length (bp) | 807 |
| Coding sequence length (bp) | 807 |
| Protein length (aa) | 269 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13023 | HD_3 | HD domain | 2.0E-50 | 60 | 206 |
| PF12917 | YfbR-like | 5'-deoxynucleotidase YfbR-like | 7.7E-07 | 55 | 196 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P87242|YC0H_SCHPO | HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4G3.17 PE=3 SV=1 | 49 | 242 | 6.0E-42 |
| sp|P38331|YB92_YEAST | HD domain-containing protein YBR242W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR242W PE=1 SV=1 | 53 | 238 | 1.0E-41 |
| sp|P53144|YGK1_YEAST | HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL101W PE=1 SV=1 | 53 | 237 | 5.0E-38 |
| sp|Q66L17|HDDC2_XENLA | HD domain-containing protein 2 OS=Xenopus laevis GN=hddc2 PE=2 SV=1 | 44 | 210 | 2.0E-33 |
| sp|Q54FK1|HDDC2_DICDI | HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1 | 50 | 203 | 3.0E-31 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P87242|YC0H_SCHPO | HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4G3.17 PE=3 SV=1 | 49 | 242 | 6.0E-42 |
| sp|P38331|YB92_YEAST | HD domain-containing protein YBR242W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR242W PE=1 SV=1 | 53 | 238 | 1.0E-41 |
| sp|P53144|YGK1_YEAST | HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL101W PE=1 SV=1 | 53 | 237 | 5.0E-38 |
| sp|Q66L17|HDDC2_XENLA | HD domain-containing protein 2 OS=Xenopus laevis GN=hddc2 PE=2 SV=1 | 44 | 210 | 2.0E-33 |
| sp|Q54FK1|HDDC2_DICDI | HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1 | 50 | 203 | 3.0E-31 |
| sp|Q1LUI2|HDDC2_DANRE | HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1 | 53 | 210 | 9.0E-30 |
| sp|Q3SXD3|HDDC2_MOUSE | HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=1 SV=1 | 53 | 198 | 3.0E-22 |
| sp|Q0P565|HDDC2_BOVIN | HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1 | 53 | 198 | 9.0E-22 |
| sp|Q7Z4H3|HDDC2_HUMAN | HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1 | 51 | 198 | 9.0E-22 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6168 MKSGSEEKTGSKPDLANIGYTPAAKVSEPWTVEKVLAEIPGDLSLKQTSSSPLVFFHLLERLKTTKREGWRRFGI SHGESIADHMYRMSIISMLAPPSLAARLDLGKCIKMCLVHDMAELIVGDITPVDGVPKPEKSRRETNTMEYLTSL LNDGNQCAAAGAELGAIWQEYEDAETLESRFVHDVDKMELLLQMMEYERRAQQTLDLGEFAYVARKMGLAETRVW AEELLGERREFWGIRERVDGDLGTNGGVAEERNEQQEAYYSQS* |
| Coding | >OphauG2|6168 ATGAAGTCTGGGAGCGAGGAAAAGACAGGCTCCAAGCCAGACCTTGCCAATATTGGATACACGCCTGCGGCCAAA GTGTCGGAGCCATGGACGGTGGAAAAAGTCTTGGCGGAAATCCCTGGCGACTTGTCGCTGAAACAAACGTCGTCG TCGCCGCTTGTTTTCTTCCACTTGCTGGAGCGGCTCAAGACGACCAAGCGTGAGGGATGGAGGAGATTTGGCATT TCCCATGGCGAATCCATTGCCGACCACATGTATCGCATGTCCATCATCTCGATGCTCGCGCCCCCGTCGCTCGCG GCGCGGCTCGACCTGGGCAAATGCATCAAGATGTGTTTGGTGCACGACATGGCGGAACTGATTGTTGGAGACATC ACCCCCGTGGACGGGGTTCCCAAGCCGGAAAAGAGCCGGCGCGAAACAAACACCATGGAGTATCTAACAAGCCTG CTCAACGATGGCAATCAATGTGCAGCAGCTGGGGCGGAATTGGGAGCCATTTGGCAAGAGTACGAGGACGCAGAG ACGTTGGAGAGCAGATTTGTGCACGACGTGGATAAAATGGAACTCTTGTTGCAAATGATGGAGTATGAGCGGCGC GCGCAGCAGACGCTGGACTTGGGCGAATTTGCCTATGTTGCGCGCAAAATGGGCTTGGCTGAGACGCGGGTCTGG GCTGAGGAGCTGCTGGGCGAGCGACGCGAGTTTTGGGGCATTCGGGAGCGTGTTGATGGCGACTTGGGGACGAAT GGCGGCGTGGCCGAGGAACGAAACGAGCAGCAAGAGGCCTACTATTCGCAGAGCTAA |
| Transcript | >OphauG2|6168 ATGAAGTCTGGGAGCGAGGAAAAGACAGGCTCCAAGCCAGACCTTGCCAATATTGGATACACGCCTGCGGCCAAA GTGTCGGAGCCATGGACGGTGGAAAAAGTCTTGGCGGAAATCCCTGGCGACTTGTCGCTGAAACAAACGTCGTCG TCGCCGCTTGTTTTCTTCCACTTGCTGGAGCGGCTCAAGACGACCAAGCGTGAGGGATGGAGGAGATTTGGCATT TCCCATGGCGAATCCATTGCCGACCACATGTATCGCATGTCCATCATCTCGATGCTCGCGCCCCCGTCGCTCGCG GCGCGGCTCGACCTGGGCAAATGCATCAAGATGTGTTTGGTGCACGACATGGCGGAACTGATTGTTGGAGACATC ACCCCCGTGGACGGGGTTCCCAAGCCGGAAAAGAGCCGGCGCGAAACAAACACCATGGAGTATCTAACAAGCCTG CTCAACGATGGCAATCAATGTGCAGCAGCTGGGGCGGAATTGGGAGCCATTTGGCAAGAGTACGAGGACGCAGAG ACGTTGGAGAGCAGATTTGTGCACGACGTGGATAAAATGGAACTCTTGTTGCAAATGATGGAGTATGAGCGGCGC GCGCAGCAGACGCTGGACTTGGGCGAATTTGCCTATGTTGCGCGCAAAATGGGCTTGGCTGAGACGCGGGTCTGG GCTGAGGAGCTGCTGGGCGAGCGACGCGAGTTTTGGGGCATTCGGGAGCGTGTTGATGGCGACTTGGGGACGAAT GGCGGCGTGGCCGAGGAACGAAACGAGCAGCAAGAGGCCTACTATTCGCAGAGCTAA |
| Gene | >OphauG2|6168 ATGAAGTCTGGGAGCGAGGAAAAGACAGGCTCCAAGCCAGACCTTGCCAGTAGGACGCTTGTGAGGCGGCGAGAT GGCCAAGGCTAACTCTTGCCATGGCAGATATTGGATACACGCCTGCGGCCAAAGTGTCGGAGCCATGGACGGTGG AAAAAGTCTTGGCGGAAATCCCTGGCGACTTGTCGCTGAAACAAACGTCGTCGTCGCCGCTTGTTTTCTTCCACT TGCTGGAGCGGCTCAAGACGACCAAGCGTGAGGGATGGAGGAGATTTGGCATTTCCCAGTGAGGCAATCTTGGAA CAAGACAAGAAAAAGAGGAAGCGTCATGAAGCCGCTGACAAGTCTAGTGGCGAATCCATTGCCGACCACATGTAT CGCATGTCCATCATCTCGATGCTCGCGCCCCCGTCGCTCGCGGCGCGGCTCGACCTGGGCAAATGCATCAAGATG TGTTTGGTGCACGACATGGCGGAACTGATTGTTGGAGACATCACCCCCGTGGACGGGGTTCCCAAGCCGGAAAAG AGCCGGCGCGAAACAAACACCATGGAGTATCTAACAAGCCTGCTCAACGATGGCAATCAATGTGCAGCAGCTGGG GCGGAATTGGGAGCCATTTGGCAAGAGTACGAGGACGCAGAGACGTTGGAGAGCAGATTTGTGCACGACGTGGAT AAAATGGAACTCTTGTTGCAAATGATGGAGTATGAGCGGCGCGCGCAGCAGACGCTGGACTTGGGCGAATTTGCC TATGTTGCGCGCAAAATGGGCTTGGCTGAGACGCGGGTCTGGGCTGAGGAGCTGCTGGGCGAGCGACGCGAGTTT TGGGGCATTCGGGAGCGTGTTGATGGCGACTTGGGGACGAATGGCGGCGTGGCCGAGGAACGAAACGAGCAGCAA GAGGCCTACTATTCGCAGAGCTAA |