Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|6086
Gene name
LocationContig_6:58541..59357
Strand-
Gene length (bp)816
Transcript length (bp)816
Coding sequence length (bp)816
Protein length (aa) 272

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13621 Cupin_8 Cupin-like domain 7.9E-14 49 164
PF02373 JmjC JmjC domain, hydroxylase 6.9E-10 56 166

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q67XX3|FB252_ARATH F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 PE=2 SV=1 2 240 6.0E-54
sp|Q9GYI4|JMJD6_CAEEL Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 OS=Caenorhabditis elegans GN=psr-1 PE=1 SV=2 1 224 9.0E-30
sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thaliana GN=At1g78280 PE=2 SV=3 1 167 6.0E-29
sp|Q5R6G2|JMJD6_PONAB Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Pongo abelii GN=JMJD6 PE=2 SV=1 1 167 4.0E-28
sp|Q6NYC1|JMJD6_HUMAN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Homo sapiens GN=JMJD6 PE=1 SV=1 1 167 4.0E-28
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Swissprot ID Swissprot Description Start End E-value
sp|Q67XX3|FB252_ARATH F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 PE=2 SV=1 2 240 6.0E-54
sp|Q9GYI4|JMJD6_CAEEL Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 OS=Caenorhabditis elegans GN=psr-1 PE=1 SV=2 1 224 9.0E-30
sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thaliana GN=At1g78280 PE=2 SV=3 1 167 6.0E-29
sp|Q5R6G2|JMJD6_PONAB Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Pongo abelii GN=JMJD6 PE=2 SV=1 1 167 4.0E-28
sp|Q6NYC1|JMJD6_HUMAN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Homo sapiens GN=JMJD6 PE=1 SV=1 1 167 4.0E-28
sp|Q6Q4H1|JMJD6_HYDVU Bifunctional arginine demethylase and lysyl-hydroxylase PSR OS=Hydra vulgaris GN=PSR PE=1 SV=1 1 166 6.0E-28
sp|Q6PFM0|JMJD6_DANRE Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Danio rerio GN=jmjd6 PE=2 SV=2 1 167 1.0E-27
sp|Q58DS6|JMJD6_BOVIN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Bos taurus GN=JMJD6 PE=2 SV=1 1 167 2.0E-27
sp|Q6AYK2|JMJD6_RAT Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Rattus norvegicus GN=Jmjd6 PE=2 SV=2 1 167 2.0E-27
sp|Q9ERI5|JMJD6_MOUSE Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Mus musculus GN=Jmjd6 PE=1 SV=2 1 167 2.0E-27
sp|Q9VD28|JMJD6_DROME Bifunctional arginine demethylase and lysyl-hydroxylase PSR OS=Drosophila melanogaster GN=PSR PE=2 SV=1 1 198 2.0E-27
sp|Q5ZMK5|JMJD6_CHICK Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Gallus gallus GN=JMJD6 PE=2 SV=1 1 167 3.0E-27
sp|Q623U2|JMJD6_CAEBR Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 OS=Caenorhabditis briggsae GN=psr-1 PE=3 SV=1 1 166 6.0E-27
sp|Q6GND3|JMD6A_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A OS=Xenopus laevis GN=jmjd6-a PE=2 SV=1 1 167 1.0E-26
sp|Q7ZX37|JMD6B_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-B OS=Xenopus laevis GN=jmjd6-b PE=2 SV=1 1 167 4.0E-26
sp|Q08BY5|JMJD4_DANRE JmjC domain-containing protein 4 OS=Danio rerio GN=jmjd4 PE=2 SV=1 54 167 6.0E-10
sp|Q3UWM4|KDM7A_MOUSE Lysine-specific demethylase 7A OS=Mus musculus GN=Kdm7a PE=2 SV=2 24 167 8.0E-09
sp|Q9VJ97|JMJD4_DROME JmjC domain-containing protein 4 homolog OS=Drosophila melanogaster GN=CG7200 PE=2 SV=1 10 166 1.0E-08
sp|P0CF52|KDM7B_DANRE Lysine-specific demethylase 7B OS=Danio rerio GN=jhdm1db PE=2 SV=1 14 167 2.0E-08
sp|Q5RHD1|KDM7A_DANRE Lysine-specific demethylase 7A OS=Danio rerio GN=kdm7a PE=2 SV=2 24 167 2.0E-08
sp|Q5ZHV5|JMJD4_CHICK JmjC domain-containing protein 4 OS=Gallus gallus GN=JMJD4 PE=2 SV=1 54 167 2.0E-08
sp|Q6ZMT4|KDM7A_HUMAN Lysine-specific demethylase 7A OS=Homo sapiens GN=KDM7A PE=1 SV=2 24 167 2.0E-08
sp|Q08D35|KDM7A_XENTR Lysine-specific demethylase 7A OS=Xenopus tropicalis GN=kdm7a PE=2 SV=1 24 167 8.0E-08
sp|Q6BXJ4|JHD1_DEBHA JmjC domain-containing histone demethylation protein 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=JHD1 PE=3 SV=2 42 167 4.0E-07
sp|Q9H9V9|JMJD4_HUMAN JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=1 SV=2 54 167 5.0E-07
sp|Q8BFT6|JMJD4_MOUSE JmjC domain-containing protein 4 OS=Mus musculus GN=Jmjd4 PE=2 SV=1 54 167 6.0E-07
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|6086
MDDNMDESPLYLFDRMFAEKMGIDIGNKPSAAYWRPDCFGPDLFAALGNDRPAHRWLIIGPERSGSTFHKDPNGT
SAWNAVIQGSKYWIMFPPTAQVPGVYVSRDSSEVTSPLSIAEWLLSFHGEARRLPECVEGVCRAGEILHVPSGWW
HLVVNLERGIALTQNFVPQSPSLSLLSEVLLFLRDKPNQVSGFARSISDPYELFASRLMQEQPMLLERALEAVER
KQSKKRKWHDVAGGDKECRQDGATGFSFGFCTDDDDNEPTADASIT*
Coding >OphauG2|6086
ATGGACGACAACATGGACGAGAGCCCGCTGTATCTCTTTGATCGCATGTTTGCGGAGAAGATGGGTATTGATATC
GGAAATAAGCCCAGCGCTGCGTACTGGCGGCCAGACTGCTTCGGACCCGATCTCTTTGCGGCCCTGGGAAATGAC
CGTCCAGCTCACCGATGGCTCATAATTGGGCCTGAAAGGAGTGGCTCAACATTTCACAAGGACCCCAATGGCACA
AGCGCCTGGAACGCCGTGATCCAAGGCTCCAAGTATTGGATCATGTTTCCTCCAACGGCGCAAGTGCCTGGAGTT
TACGTGTCTCGCGACAGCAGCGAAGTGACGAGTCCTTTGAGTATCGCCGAGTGGCTGCTCAGTTTTCACGGAGAG
GCACGCCGCCTGCCAGAATGCGTCGAGGGCGTCTGTAGGGCTGGAGAGATCCTACATGTGCCGAGCGGGTGGTGG
CATCTTGTGGTTAATCTAGAGCGCGGGATTGCTCTGACGCAGAACTTTGTGCCACAGTCGCCCAGCTTGAGCCTA
CTGTCCGAAGTTTTGCTCTTCTTAAGAGATAAGCCGAATCAGGTGTCTGGCTTCGCGAGAAGTATAAGCGATCCA
TACGAGCTCTTCGCCTCAAGACTCATGCAAGAGCAGCCAATGCTTTTGGAGAGAGCGTTGGAGGCTGTTGAGAGA
AAGCAGAGCAAGAAACGTAAGTGGCATGATGTGGCTGGAGGCGACAAGGAGTGTAGGCAAGACGGAGCCACCGGG
TTCAGCTTTGGATTTTGTACAGACGACGATGACAATGAGCCGACTGCCGATGCGAGTATAACTTGA
Transcript >OphauG2|6086
ATGGACGACAACATGGACGAGAGCCCGCTGTATCTCTTTGATCGCATGTTTGCGGAGAAGATGGGTATTGATATC
GGAAATAAGCCCAGCGCTGCGTACTGGCGGCCAGACTGCTTCGGACCCGATCTCTTTGCGGCCCTGGGAAATGAC
CGTCCAGCTCACCGATGGCTCATAATTGGGCCTGAAAGGAGTGGCTCAACATTTCACAAGGACCCCAATGGCACA
AGCGCCTGGAACGCCGTGATCCAAGGCTCCAAGTATTGGATCATGTTTCCTCCAACGGCGCAAGTGCCTGGAGTT
TACGTGTCTCGCGACAGCAGCGAAGTGACGAGTCCTTTGAGTATCGCCGAGTGGCTGCTCAGTTTTCACGGAGAG
GCACGCCGCCTGCCAGAATGCGTCGAGGGCGTCTGTAGGGCTGGAGAGATCCTACATGTGCCGAGCGGGTGGTGG
CATCTTGTGGTTAATCTAGAGCGCGGGATTGCTCTGACGCAGAACTTTGTGCCACAGTCGCCCAGCTTGAGCCTA
CTGTCCGAAGTTTTGCTCTTCTTAAGAGATAAGCCGAATCAGGTGTCTGGCTTCGCGAGAAGTATAAGCGATCCA
TACGAGCTCTTCGCCTCAAGACTCATGCAAGAGCAGCCAATGCTTTTGGAGAGAGCGTTGGAGGCTGTTGAGAGA
AAGCAGAGCAAGAAACGTAAGTGGCATGATGTGGCTGGAGGCGACAAGGAGTGTAGGCAAGACGGAGCCACCGGG
TTCAGCTTTGGATTTTGTACAGACGACGATGACAATGAGCCGACTGCCGATGCGAGTATAACTTGA
Gene >OphauG2|6086
ATGGACGACAACATGGACGAGAGCCCGCTGTATCTCTTTGATCGCATGTTTGCGGAGAAGATGGGTATTGATATC
GGAAATAAGCCCAGCGCTGCGTACTGGCGGCCAGACTGCTTCGGACCCGATCTCTTTGCGGCCCTGGGAAATGAC
CGTCCAGCTCACCGATGGCTCATAATTGGGCCTGAAAGGAGTGGCTCAACATTTCACAAGGACCCCAATGGCACA
AGCGCCTGGAACGCCGTGATCCAAGGCTCCAAGTATTGGATCATGTTTCCTCCAACGGCGCAAGTGCCTGGAGTT
TACGTGTCTCGCGACAGCAGCGAAGTGACGAGTCCTTTGAGTATCGCCGAGTGGCTGCTCAGTTTTCACGGAGAG
GCACGCCGCCTGCCAGAATGCGTCGAGGGCGTCTGTAGGGCTGGAGAGATCCTACATGTGCCGAGCGGGTGGTGG
CATCTTGTGGTTAATCTAGAGCGCGGGATTGCTCTGACGCAGAACTTTGTGCCACAGTCGCCCAGCTTGAGCCTA
CTGTCCGAAGTTTTGCTCTTCTTAAGAGATAAGCCGAATCAGGTGTCTGGCTTCGCGAGAAGTATAAGCGATCCA
TACGAGCTCTTCGCCTCAAGACTCATGCAAGAGCAGCCAATGCTTTTGGAGAGAGCGTTGGAGGCTGTTGAGAGA
AAGCAGAGCAAGAAACGTAAGTGGCATGATGTGGCTGGAGGCGACAAGGAGTGTAGGCAAGACGGAGCCACCGGG
TTCAGCTTTGGATTTTGTACAGACGACGATGACAATGAGCCGACTGCCGATGCGAGTATAACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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