Protein ID | OphauG2|6048 |
Gene name | |
Location | Contig_595:9786..11663 |
Strand | - |
Gene length (bp) | 1877 |
Transcript length (bp) | 1758 |
Coding sequence length (bp) | 1758 |
Protein length (aa) | 586 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01302 | CAP_GLY | CAP-Gly domain | 8.1E-18 | 7 | 73 |
PF13516 | LRR_6 | Leucine Rich repeat | 3.5E-01 | 313 | 327 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5RBD9|TBCE_PONAB | Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1 | 7 | 498 | 3.0E-58 |
sp|Q15813|TBCE_HUMAN | Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1 | 7 | 498 | 9.0E-58 |
sp|Q8CIV8|TBCE_MOUSE | Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1 | 7 | 500 | 2.0E-57 |
sp|Q5FVQ9|TBCE_RAT | Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1 | 7 | 500 | 3.0E-57 |
sp|Q32KS0|TBCE_BOVIN | Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1 | 2 | 498 | 7.0E-54 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5RBD9|TBCE_PONAB | Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1 | 7 | 498 | 3.0E-58 |
sp|Q15813|TBCE_HUMAN | Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1 | 7 | 498 | 9.0E-58 |
sp|Q8CIV8|TBCE_MOUSE | Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1 | 7 | 500 | 2.0E-57 |
sp|Q5FVQ9|TBCE_RAT | Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1 | 7 | 500 | 3.0E-57 |
sp|Q32KS0|TBCE_BOVIN | Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1 | 2 | 498 | 7.0E-54 |
sp|Q5U378|TBCE_DANRE | Tubulin-specific chaperone E OS=Danio rerio GN=tbce PE=2 SV=2 | 1 | 496 | 8.0E-52 |
sp|Q5U508|TBCE_XENLA | Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1 | 9 | 502 | 3.0E-50 |
sp|Q8GRL7|TBCE_ARATH | Tubulin-folding cofactor E OS=Arabidopsis thaliana GN=TFCE PE=2 SV=1 | 4 | 510 | 1.0E-39 |
sp|P39937|PAC2_YEAST | Protein PAC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAC2 PE=1 SV=1 | 7 | 500 | 2.0E-28 |
sp|Q10303|ALP21_SCHPO | Cell polarity protein alp21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alp21 PE=1 SV=2 | 68 | 436 | 2.0E-19 |
sp|Q55CN0|TBCE_DICDI | Tubulin-specific chaperone E OS=Dictyostelium discoideum GN=tbce PE=3 SV=1 | 6 | 351 | 2.0E-19 |
sp|Q5QJ74|TBCEL_HUMAN | Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens GN=TBCEL PE=1 SV=2 | 79 | 445 | 3.0E-13 |
sp|Q5PQJ7|TBCEL_RAT | Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus GN=Tbcel PE=1 SV=1 | 79 | 444 | 4.0E-13 |
sp|Q8C5W3|TBCEL_MOUSE | Tubulin-specific chaperone cofactor E-like protein OS=Mus musculus GN=Tbcel PE=1 SV=1 | 79 | 444 | 1.0E-10 |
sp|Q9RBS2|POPC_RALSO | Protein PopC OS=Ralstonia solanacearum (strain GMI1000) GN=popC PE=4 SV=2 | 142 | 296 | 4.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 29 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|6048 MTASPYVGQRISYGGALCTVRYVGPVAGTSGSWLGVEWDDGSRGRHKGSHKGVSYFTCLSSSPTAASFVRPSRPA DTPRSFVAALKQRYAPDDDEQRDKTHGGPIVISGKVAEEMGFDKLRRRLARLRDLRIALLDGWCVASPPDDTQAS VADTCPAIEHLDLSRNLLERLGSVLDICGQLPALRRLSLNGNRFHAVLDDPCLEDAPAAMSRVEELGLGETLLGW EELGRIATACPSLTSLAVGTNQLCLLPTLDYGTLVSTLSTVNLEYNSFKALSDIASLASLGSLRNLDLKGNSISA IAAPGAESPIFPPSLHYLDMSYNEIGDWAFVDGLGLHFPGLTGLRIAHNPVYGRSDTESGTPSLEESHMMTVARL GRLKSVNFTQVRQGDRANAEMFYLSRIARQLAAVPEAAEHTVLARHPRYAELCEIYGAPDILRRDQVNPSFLEAR LVTVAFYCGAKGPKTVRIPRSFDIYAVRGIAGKLFRLSPLKIRLVWETGEWDPVAGYDEAECGSDADDADDGHTG HVGSRSPPCRLGESRHEGGIEEARDKSGRWVKREAELTDGPKQLGYCVDGHDVKIRLEVS* |
Coding | >OphauG2|6048 ATGACAGCCTCGCCCTACGTCGGGCAGCGCATCTCGTACGGCGGTGCTCTCTGCACGGTGCGCTACGTCGGCCCT GTTGCCGGCACGAGTGGCTCGTGGCTCGGGGTCGAATGGGACGACGGGTCGCGTGGCCGGCACAAGGGCTCCCAC AAGGGCGTCAGCTATTTCACGTGTCTCTCGTCATCGCCAACCGCCGCGTCGTTTGTGCGGCCCTCGCGTCCAGCC GACACGCCACGAAGCTTCGTTGCCGCGCTCAAACAGAGATACGCCCCCGACGACGACGAGCAGCGCGACAAGACC CATGGCGGACCCATTGTCATCTCGGGCAAGGTGGCAGAGGAAATGGGCTTCGACAAGCTGCGACGGCGCCTTGCA CGGCTGCGTGACCTGCGCATTGCCTTGCTCGACGGCTGGTGCGTTGCGTCGCCGCCCGACGACACCCAGGCCTCA GTGGCCGACACTTGTCCGGCCATTGAGCATCTGGATCTCAGCAGGAACCTTTTGGAGCGGCTTGGCTCGGTCCTC GACATCTGTGGCCAATTGCCTGCCTTGCGTCGCCTGAGTCTCAATGGCAATCGCTTCCACGCTGTCCTCGACGAC CCGTGCCTTGAAGATGCCCCAGCTGCCATGAGCCGTGTCGAGGAACTTGGCCTTGGCGAGACCTTGCTCGGCTGG GAGGAGCTCGGCCGCATTGCCACGGCTTGTCCTAGTCTAACAAGCCTTGCTGTCGGCACCAACCAGCTCTGCTTG CTGCCAACCCTCGACTATGGCACCCTCGTCTCAACACTGAGCACCGTCAATCTCGAGTATAACAGCTTCAAAGCC TTGTCCGACATTGCCAGCCTCGCCAGCCTCGGGTCGCTGCGCAATCTTGACCTCAAGGGCAACAGCATTTCAGCC ATTGCGGCTCCCGGTGCTGAGAGTCCCATATTCCCCCCGTCGTTGCATTATCTCGACATGTCGTACAATGAGATT GGCGACTGGGCGTTTGTGGATGGCCTTGGCCTTCATTTCCCTGGCCTGACGGGCTTGCGCATCGCCCACAATCCC GTCTACGGCCGCTCTGACACCGAGTCCGGGACTCCATCGCTCGAGGAATCTCACATGATGACAGTGGCCCGTCTG GGCCGGCTCAAGAGCGTCAACTTCACACAGGTGCGACAAGGCGACCGCGCAAACGCCGAAATGTTTTATCTTTCT CGAATTGCGCGCCAGCTCGCTGCTGTCCCCGAGGCGGCCGAACACACGGTCCTTGCCCGGCACCCACGCTATGCC GAGCTGTGTGAAATATACGGCGCACCCGACATTCTTCGCCGCGACCAGGTCAACCCATCCTTTCTCGAGGCGCGG CTCGTCACGGTCGCCTTTTACTGCGGCGCCAAGGGCCCCAAGACGGTGAGGATTCCAAGGTCGTTTGACATTTAT GCCGTCCGAGGCATTGCGGGCAAGCTTTTCCGTCTCTCGCCCCTCAAGATACGTCTAGTCTGGGAAACTGGCGAG TGGGATCCTGTCGCGGGCTATGACGAAGCCGAATGCGGGAGTGACGCCGACGACGCCGACGACGGCCACACTGGC CATGTCGGCTCAAGAAGCCCACCATGTCGTCTTGGCGAGTCTCGCCACGAGGGAGGGATTGAGGAAGCAAGGGAC AAATCTGGCCGCTGGGTCAAACGGGAAGCCGAATTGACAGATGGGCCAAAGCAACTAGGATACTGTGTCGACGGT CATGATGTCAAGATCCGACTTGAAGTGTCGTGA |
Transcript | >OphauG2|6048 ATGACAGCCTCGCCCTACGTCGGGCAGCGCATCTCGTACGGCGGTGCTCTCTGCACGGTGCGCTACGTCGGCCCT GTTGCCGGCACGAGTGGCTCGTGGCTCGGGGTCGAATGGGACGACGGGTCGCGTGGCCGGCACAAGGGCTCCCAC AAGGGCGTCAGCTATTTCACGTGTCTCTCGTCATCGCCAACCGCCGCGTCGTTTGTGCGGCCCTCGCGTCCAGCC GACACGCCACGAAGCTTCGTTGCCGCGCTCAAACAGAGATACGCCCCCGACGACGACGAGCAGCGCGACAAGACC CATGGCGGACCCATTGTCATCTCGGGCAAGGTGGCAGAGGAAATGGGCTTCGACAAGCTGCGACGGCGCCTTGCA CGGCTGCGTGACCTGCGCATTGCCTTGCTCGACGGCTGGTGCGTTGCGTCGCCGCCCGACGACACCCAGGCCTCA GTGGCCGACACTTGTCCGGCCATTGAGCATCTGGATCTCAGCAGGAACCTTTTGGAGCGGCTTGGCTCGGTCCTC GACATCTGTGGCCAATTGCCTGCCTTGCGTCGCCTGAGTCTCAATGGCAATCGCTTCCACGCTGTCCTCGACGAC CCGTGCCTTGAAGATGCCCCAGCTGCCATGAGCCGTGTCGAGGAACTTGGCCTTGGCGAGACCTTGCTCGGCTGG GAGGAGCTCGGCCGCATTGCCACGGCTTGTCCTAGTCTAACAAGCCTTGCTGTCGGCACCAACCAGCTCTGCTTG CTGCCAACCCTCGACTATGGCACCCTCGTCTCAACACTGAGCACCGTCAATCTCGAGTATAACAGCTTCAAAGCC TTGTCCGACATTGCCAGCCTCGCCAGCCTCGGGTCGCTGCGCAATCTTGACCTCAAGGGCAACAGCATTTCAGCC ATTGCGGCTCCCGGTGCTGAGAGTCCCATATTCCCCCCGTCGTTGCATTATCTCGACATGTCGTACAATGAGATT GGCGACTGGGCGTTTGTGGATGGCCTTGGCCTTCATTTCCCTGGCCTGACGGGCTTGCGCATCGCCCACAATCCC GTCTACGGCCGCTCTGACACCGAGTCCGGGACTCCATCGCTCGAGGAATCTCACATGATGACAGTGGCCCGTCTG GGCCGGCTCAAGAGCGTCAACTTCACACAGGTGCGACAAGGCGACCGCGCAAACGCCGAAATGTTTTATCTTTCT CGAATTGCGCGCCAGCTCGCTGCTGTCCCCGAGGCGGCCGAACACACGGTCCTTGCCCGGCACCCACGCTATGCC GAGCTGTGTGAAATATACGGCGCACCCGACATTCTTCGCCGCGACCAGGTCAACCCATCCTTTCTCGAGGCGCGG CTCGTCACGGTCGCCTTTTACTGCGGCGCCAAGGGCCCCAAGACGGTGAGGATTCCAAGGTCGTTTGACATTTAT GCCGTCCGAGGCATTGCGGGCAAGCTTTTCCGTCTCTCGCCCCTCAAGATACGTCTAGTCTGGGAAACTGGCGAG TGGGATCCTGTCGCGGGCTATGACGAAGCCGAATGCGGGAGTGACGCCGACGACGCCGACGACGGCCACACTGGC CATGTCGGCTCAAGAAGCCCACCATGTCGTCTTGGCGAGTCTCGCCACGAGGGAGGGATTGAGGAAGCAAGGGAC AAATCTGGCCGCTGGGTCAAACGGGAAGCCGAATTGACAGATGGGCCAAAGCAACTAGGATACTGTGTCGACGGT CATGATGTCAAGATCCGACTTGAAGTGTCGTGA |
Gene | >OphauG2|6048 ATGACAGCCTCGCCCTACGTCGGGCAGCGCATCTCGTACGGCGGTGCTCTCTGCACGGTGCGCTACGTCGGCCCT GTTGCCGGCACGAGTGGCTCGTGGCTCGGGGTCGAATGGGACGACGGGTCGCGTGGCCGGCACAAGGGCTCCCAC AAGGGCGTCAGCTATTTCACGTGTAGGATCATGGCCTTGCCTTGTTGTACCTCGCACTCATATAGGCTCCGACGC TGCTAGGTCTCTCGTCATCGCCAACCGCCGCGTCGTTTGTGCGGCCCTCGCGTCCAGCCGACACGCCACGAAGCT TCGTTGCCGCGCTCAAACAGAGATACGCCCCCGACGACGACGAGCAGCGCGACAAGACCCATGGCGGACCCATTG TCATCTCGGGCAAGGTGGCAGAGGAAATGGGCTTCGACAAGCTGCGACGGCGCCTTGCACGGCTGCGTGACCTGC GCATTGCCTTGCTCGACGGCTGGTGCGTTGCGTCGCCGCCCGACGACACCCAGGCCTCAGTGGCCGACACTTGTC CGGCCATTGAGCATCTGGATCTCAGCAGGAACCTTTTGGAGCGGCTTGGCTCGGTCCTCGACATCTGTGGCCAAT TGCCTGCCTTGCGTCGCCTGAGTCTCAAGTAAGAATGAGCCGTGGTTCCTGCGAATCTGTCTGGCTGATGGCAAC ACCATGTCCGCAGTGGCAATCGCTTCCACGCTGTCCTCGACGACCCGTGCCTTGAAGATGCCCCAGCTGCCATGA GCCGTGTCGAGGAACTTGGCCTTGGCGAGACCTTGCTCGGCTGGGAGGAGCTCGGCCGCATTGCCACGGCTTGTC CTAGTCTAACAAGCCTTGCTGTCGGCACCAACCAGCTCTGCTTGCTGCCAACCCTCGACTATGGCACCCTCGTCT CAACACTGAGCACCGTCAATCTCGAGTATAACAGCTTCAAAGCCTTGTCCGACATTGCCAGCCTCGCCAGCCTCG GGTCGCTGCGCAATCTTGACCTCAAGGGCAACAGCATTTCAGCCATTGCGGCTCCCGGTGCTGAGAGTCCCATAT TCCCCCCGTCGTTGCATTATCTCGACATGTCGTACAATGAGATTGGCGACTGGGCGTTTGTGGATGGCCTTGGCC TTCATTTCCCTGGCCTGACGGGCTTGCGCATCGCCCACAATCCCGTCTACGGCCGCTCTGACACCGAGTCCGGGA CTCCATCGCTCGAGGAATCTCACATGATGACAGTGGCCCGTCTGGGCCGGCTCAAGAGCGTCAACTTCACACAGG TGCGACAAGGCGACCGCGCAAACGCCGAAATGTTTTATCTTTCTCGAATTGCGCGCCAGCTCGCTGCTGTCCCCG AGGCGGCCGAACACACGGTCCTTGCCCGGCACCCACGCTATGCCGAGCTGTGTGAAATATACGGCGCACCCGACA TTCTTCGCCGCGACCAGGTCAACCCATCCTTTCTCGAGGCGCGGCTCGTCACGGTCGCCTTTTACTGCGGCGCCA AGGGCCCCAAGACGGTGAGGATTCCAAGGTCGTTTGACATTTATGCCGTCCGAGGCATTGCGGGCAAGCTTTTCC GTCTCTCGCCCCTCAAGATACGTCTAGTCTGGGAAACTGGCGAGTGGGATCCTGTCGCGGGCTATGACGAAGCCG AATGCGGGAGTGACGCCGACGACGCCGACGACGGCCACACTGGCCATGTCGGCTCAAGAAGCCCACCATGTCGTC TTGGCGAGTCTCGCCACGAGGGAGGGATTGAGGAAGCAAGGGACAAATCTGGCCGCTGGGTCAAACGGGAAGCCG AATTGACAGATGGGCCAAAGCAACTAGGATACTGTGTCGACGGTCATGATGTCAAGATCCGACTTGAAGTGTCGT GA |