Protein ID | OphauG2|6038 |
Gene name | |
Location | Contig_593:10904..11746 |
Strand | + |
Gene length (bp) | 842 |
Transcript length (bp) | 786 |
Coding sequence length (bp) | 786 |
Protein length (aa) | 262 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02219 | MTHFR | Methylenetetrahydrofolate reductase | 1.1E-60 | 29 | 249 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O74927|MTHR2_SCHPO | Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=met11 PE=1 SV=2 | 37 | 234 | 5.0E-50 |
sp|P46151|MTHR1_YEAST | Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MET12 PE=1 SV=2 | 34 | 249 | 9.0E-47 |
sp|Q10258|MTHR1_SCHPO | Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=met9 PE=1 SV=1 | 23 | 249 | 9.0E-45 |
sp|O67422|METF_AQUAE | 5,10-methylenetetrahydrofolate reductase OS=Aquifex aeolicus (strain VF5) GN=metF PE=3 SV=1 | 38 | 229 | 1.0E-38 |
sp|Q75HE6|MTHR_ORYSJ | Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1 | 25 | 259 | 3.0E-38 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O74927|MTHR2_SCHPO | Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=met11 PE=1 SV=2 | 37 | 234 | 5.0E-50 |
sp|P46151|MTHR1_YEAST | Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MET12 PE=1 SV=2 | 34 | 249 | 9.0E-47 |
sp|Q10258|MTHR1_SCHPO | Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=met9 PE=1 SV=1 | 23 | 249 | 9.0E-45 |
sp|O67422|METF_AQUAE | 5,10-methylenetetrahydrofolate reductase OS=Aquifex aeolicus (strain VF5) GN=metF PE=3 SV=1 | 38 | 229 | 1.0E-38 |
sp|Q75HE6|MTHR_ORYSJ | Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1 | 25 | 259 | 3.0E-38 |
sp|P53128|MTHR2_YEAST | Methylenetetrahydrofolate reductase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MET13 PE=1 SV=2 | 25 | 249 | 5.0E-38 |
sp|Q9SE60|MTHR1_ARATH | Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1 | 25 | 249 | 6.0E-37 |
sp|Q9SE94|MTHR1_MAIZE | Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1 | 25 | 259 | 1.0E-36 |
sp|O80585|MTHR2_ARATH | Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2 | 25 | 259 | 2.0E-36 |
sp|Q5I598|MTHR_BOVIN | Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1 | 24 | 249 | 3.0E-35 |
sp|Q9WU20|MTHR_MOUSE | Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=1 SV=2 | 24 | 249 | 1.0E-34 |
sp|P42898|MTHR_HUMAN | Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3 | 24 | 249 | 3.0E-34 |
sp|Q60HE5|MTHR_MACFA | Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1 | 24 | 249 | 1.0E-33 |
sp|O54235|METF_STRLI | 5,10-methylenetetrahydrofolate reductase OS=Streptomyces lividans GN=metF PE=3 SV=1 | 16 | 249 | 2.0E-29 |
sp|Q17693|MTHR_CAEEL | Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=mthf-1 PE=3 SV=2 | 28 | 240 | 4.0E-28 |
sp|P71319|METF_PECCC | 5,10-methylenetetrahydrofolate reductase OS=Pectobacterium carotovorum subsp. carotovorum GN=metF PE=3 SV=1 | 38 | 251 | 6.0E-25 |
sp|Q8KA62|METF_BUCAP | 5,10-methylenetetrahydrofolate reductase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=metF PE=3 SV=1 | 39 | 229 | 1.0E-21 |
sp|P11003|METF_SALTY | 5,10-methylenetetrahydrofolate reductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=metF PE=3 SV=2 | 38 | 251 | 1.0E-20 |
sp|P45208|METF_HAEIN | 5,10-methylenetetrahydrofolate reductase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=metF PE=3 SV=1 | 38 | 233 | 1.0E-19 |
sp|P0AEZ2|METF_SHIFL | 5,10-methylenetetrahydrofolate reductase OS=Shigella flexneri GN=metF PE=3 SV=1 | 38 | 249 | 2.0E-19 |
sp|P0AEZ1|METF_ECOLI | 5,10-methylenetetrahydrofolate reductase OS=Escherichia coli (strain K12) GN=metF PE=1 SV=1 | 38 | 249 | 2.0E-19 |
sp|P57154|METF_BUCAI | 5,10-methylenetetrahydrofolate reductase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=metF PE=3 SV=1 | 19 | 230 | 7.0E-19 |
sp|Q9JZQ3|METF_NEIMB | 5,10-methylenetetrahydrofolate reductase OS=Neisseria meningitidis serogroup B (strain MC58) GN=metF PE=1 SV=1 | 38 | 230 | 6.0E-18 |
sp|Q89B13|METF_BUCBP | 5,10-methylenetetrahydrofolate reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=metF PE=3 SV=1 | 38 | 244 | 2.0E-17 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | Yes |
GO:0006555 | methionine metabolic process | Yes |
GO:0009987 | cellular process | No |
GO:0019752 | carboxylic acid metabolic process | No |
GO:1901605 | alpha-amino acid metabolic process | No |
GO:0006082 | organic acid metabolic process | No |
GO:0043436 | oxoacid metabolic process | No |
GO:0006790 | sulfur compound metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0044281 | small molecule metabolic process | No |
GO:0006520 | cellular amino acid metabolic process | No |
GO:0008150 | biological_process | No |
GO:0009066 | aspartate family amino acid metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0016491 | oxidoreductase activity | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | No |
GO:0071704 | organic substance metabolic process | No |
GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | No |
GO:0003674 | molecular_function | No |
GO:0000096 | sulfur amino acid metabolic process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0003824 | catalytic activity | No |
Orthofinder run ID | 4 |
Orthogroup | 503 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|6038 MRPLHLTASLLALSTTTASNTSADKITHKIASAAHDFVSLEFFPPKTPSGFTSLQSRVIRINEALQPLFVSVTWG AGGSAAQDSLRLGGMLQRDLGITTLLHVTCRGMTRRRLDETLRRARELGIRNILALKGDVPRDDGDADEASGSGE GSGEFIWAADLVRYIRRTHGGFFCIGVAGYPEGHFNASDAASRSVEHDVPYLVDKVSAGSDFIMTQIFFNASVFS AYRERLSAHPVLRSIPVVPLFLAIPDACATGWCEGE* |
Coding | >OphauG2|6038 ATGAGACCCCTACACCTCACCGCCTCCCTCCTCGCCCTCAGCACCACCACCGCCTCCAACACCAGCGCCGATAAA ATCACGCACAAAATAGCCTCGGCAGCACACGACTTTGTATCTCTGGAATTCTTCCCCCCCAAAACACCATCCGGC TTTACCAGTCTCCAGTCTCGGGTCATCAGGATTAATGAGGCGCTACAGCCATTGTTTGTAAGCGTGACTTGGGGC GCGGGCGGCTCTGCGGCTCAAGACTCGCTTCGGCTGGGGGGAATGTTGCAGCGGGATCTGGGAATCACGACTTTG CTTCATGTTACGTGTCGCGGCATGACGAGGCGGCGGCTGGATGAGACGTTGAGGCGAGCTCGGGAGCTTGGGATT CGGAATATTCTGGCGTTGAAGGGGGATGTGCCGCGAGATGACGGCGACGCGGATGAGGCGTCTGGTTCGGGGGAG GGCTCAGGCGAGTTTATCTGGGCGGCAGACCTGGTGCGGTATATTCGCCGCACACACGGCGGCTTTTTCTGCATT GGCGTGGCAGGATATCCTGAAGGGCACTTCAACGCCAGCGACGCCGCAAGCCGCAGCGTGGAGCACGATGTGCCG TACCTGGTCGACAAGGTCTCTGCCGGCAGCGATTTCATCATGACGCAAATCTTCTTCAACGCCTCCGTCTTTTCT GCCTATCGGGAAAGGCTGAGTGCTCATCCGGTGTTGAGGAGTATTCCTGTTGTTCCGCTTTTCCTCGCGATACCT GATGCGTGCGCGACTGGATGGTGCGAGGGGGAGTGA |
Transcript | >OphauG2|6038 ATGAGACCCCTACACCTCACCGCCTCCCTCCTCGCCCTCAGCACCACCACCGCCTCCAACACCAGCGCCGATAAA ATCACGCACAAAATAGCCTCGGCAGCACACGACTTTGTATCTCTGGAATTCTTCCCCCCCAAAACACCATCCGGC TTTACCAGTCTCCAGTCTCGGGTCATCAGGATTAATGAGGCGCTACAGCCATTGTTTGTAAGCGTGACTTGGGGC GCGGGCGGCTCTGCGGCTCAAGACTCGCTTCGGCTGGGGGGAATGTTGCAGCGGGATCTGGGAATCACGACTTTG CTTCATGTTACGTGTCGCGGCATGACGAGGCGGCGGCTGGATGAGACGTTGAGGCGAGCTCGGGAGCTTGGGATT CGGAATATTCTGGCGTTGAAGGGGGATGTGCCGCGAGATGACGGCGACGCGGATGAGGCGTCTGGTTCGGGGGAG GGCTCAGGCGAGTTTATCTGGGCGGCAGACCTGGTGCGGTATATTCGCCGCACACACGGCGGCTTTTTCTGCATT GGCGTGGCAGGATATCCTGAAGGGCACTTCAACGCCAGCGACGCCGCAAGCCGCAGCGTGGAGCACGATGTGCCG TACCTGGTCGACAAGGTCTCTGCCGGCAGCGATTTCATCATGACGCAAATCTTCTTCAACGCCTCCGTCTTTTCT GCCTATCGGGAAAGGCTGAGTGCTCATCCGGTGTTGAGGAGTATTCCTGTTGTTCCGCTTTTCCTCGCGATACCT GATGCGTGCGCGACTGGATGGTGCGAGGGGGAGTGA |
Gene | >OphauG2|6038 ATGAGACCCCTACACCTCACCGCCTCCCTCCTCGCCCTCAGCACCACCACCGCCTCCAACACCAGCGCCGATAAA ATCACGCACAAAATAGCCTCGGCAGCACACGACTTTGTATCTCTGGAATTCTTCCCCCCCAAAACACCATCCGGC TTTACCAGTCTCCAGTCTCGGGTCATCAGGATTAATGAGGCGCTACAGCCATTGTTTGTAAGCGTGACTTGGGGC GCGGGCGGCTCTGCGGCTCAAGACTCGCTTCGGCTGGGGGGAATGTTGCAGCGGGATCTGGGAATCACGACTTTG CTTCATGTTACGTGTCGCGGCATGACGAGGCGGCGGCTGGATGAGACGTTGAGGCGAGCTCGGGAGCTTGGGATT CGGAATATTCTGGCGTTGAAGGGGGATGTGCCGCGAGATGACGGCGACGCGGATGAGGCGTCTGGTTCGGGGGAG GGCTCAGGCGAGTTTATCTGGGCGGCAGACCTGGTGCGGTATATTCGCCGCACACACGGCGGCTTTTTCTGCATT GGCGTGGCAGGATATCCTGAAGGGCACTTCAACGCCAGCGACGCCGCAAGCCGCAGCGTGGAGCACGATGTGCCG TACCTGGTCGACAAGGTCTCTGCCGGCAGCGATTTCATCATGACGCAAATCTTCTTCAACGCCTCCGTCTTTTCT GCCTATCGGGAAAGGCTGAGTGCTCATCCGGTGTTGAGGAGTATTCCTGTTGTTCCGCTTTTCCTCGCGATACCT GGTGCGAGAGGCTTGGATCGAGTGCTTGGGCTGGCTCATGCGACGATGCCGGATGAGATGCGTGCGCGACTGGAT GGTGCGAGGGGGAGTGA |