© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|6030 |
| Gene name | |
| Location | Contig_592:2796..3671 |
| Strand | + |
| Gene length (bp) | 875 |
| Transcript length (bp) | 789 |
| Coding sequence length (bp) | 789 |
| Protein length (aa) | 263 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13640 | 2OG-FeII_Oxy_3 | 2OG-Fe(II) oxygenase superfamily | 2.5E-10 | 121 | 243 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9ZW86|P4H1_ARATH | Prolyl 4-hydroxylase 1 OS=Arabidopsis thaliana GN=P4H1 PE=1 SV=1 | 36 | 244 | 2.0E-20 |
| sp|F4JAU3|P4H2_ARATH | Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana GN=P4H2 PE=1 SV=1 | 1 | 241 | 3.0E-20 |
| sp|Q8LAN3|P4H4_ARATH | Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana GN=P4H4 PE=2 SV=1 | 34 | 241 | 2.0E-19 |
| sp|Q24JN5|P4H5_ARATH | Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana GN=P4H5 PE=2 SV=1 | 5 | 241 | 1.0E-15 |
| sp|Q8L970|P4H7_ARATH | Probable prolyl 4-hydroxylase 7 OS=Arabidopsis thaliana GN=P4H7 PE=2 SV=1 | 34 | 241 | 2.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9ZW86|P4H1_ARATH | Prolyl 4-hydroxylase 1 OS=Arabidopsis thaliana GN=P4H1 PE=1 SV=1 | 36 | 244 | 2.0E-20 |
| sp|F4JAU3|P4H2_ARATH | Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana GN=P4H2 PE=1 SV=1 | 1 | 241 | 3.0E-20 |
| sp|Q8LAN3|P4H4_ARATH | Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana GN=P4H4 PE=2 SV=1 | 34 | 241 | 2.0E-19 |
| sp|Q24JN5|P4H5_ARATH | Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana GN=P4H5 PE=2 SV=1 | 5 | 241 | 1.0E-15 |
| sp|Q8L970|P4H7_ARATH | Probable prolyl 4-hydroxylase 7 OS=Arabidopsis thaliana GN=P4H7 PE=2 SV=1 | 34 | 241 | 2.0E-14 |
| sp|F4J0A8|P4H6_ARATH | Probable prolyl 4-hydroxylase 6 OS=Arabidopsis thaliana GN=P4H6 PE=2 SV=1 | 38 | 241 | 2.0E-14 |
| sp|F4JNU8|P4H8_ARATH | Probable prolyl 4-hydroxylase 8 OS=Arabidopsis thaliana GN=P4H8 PE=3 SV=1 | 35 | 241 | 3.0E-14 |
| sp|Q6W3E9|P4HA3_RAT | Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3 PE=2 SV=1 | 42 | 244 | 2.0E-13 |
| sp|Q9LN20|P4H3_ARATH | Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana GN=P4H3 PE=2 SV=1 | 37 | 241 | 2.0E-12 |
| sp|F4JZ24|P4H10_ARATH | Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana GN=P4H10 PE=2 SV=1 | 35 | 243 | 2.0E-12 |
| sp|Q5ZLK5|P4HA2_CHICK | Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1 | 41 | 244 | 7.0E-12 |
| sp|Q6W3F0|P4HA3_MOUSE | Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2 SV=1 | 35 | 244 | 2.0E-11 |
| sp|Q5UP57|P4H_MIMIV | Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L593 PE=1 SV=1 | 40 | 244 | 7.0E-11 |
| sp|Q7Z4N8|P4HA3_HUMAN | Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1 SV=1 | 35 | 244 | 7.0E-11 |
| sp|Q60716|P4HA2_MOUSE | Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=1 SV=1 | 41 | 244 | 1.0E-10 |
| sp|F4ILF8|P4H13_ARATH | Prolyl 4-hydroxylase 13 OS=Arabidopsis thaliana GN=P4H13 PE=2 SV=1 | 25 | 244 | 8.0E-10 |
| sp|O15460|P4HA2_HUMAN | Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1 | 41 | 244 | 2.0E-09 |
| sp|Q75UG4|P4HA3_BOVIN | Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2 SV=1 | 35 | 244 | 2.0E-09 |
| sp|P54001|P4HA1_RAT | Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2 | 76 | 244 | 9.0E-09 |
| sp|P16924|P4HA1_CHICK | Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1 | 27 | 244 | 1.0E-08 |
| sp|Q1RMU3|P4HA1_BOVIN | Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1 | 76 | 244 | 1.0E-08 |
| sp|Q60715|P4HA1_MOUSE | Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=1 SV=2 | 66 | 244 | 2.0E-08 |
| sp|Q5RAG8|P4HA1_PONAB | Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1 | 76 | 244 | 4.0E-08 |
| sp|P13674|P4HA1_HUMAN | Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2 | 76 | 244 | 4.0E-08 |
| sp|Q10576|P4HA1_CAEEL | Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2 | 34 | 244 | 3.0E-07 |
| sp|Q8VZJ7|P4H9_ARATH | Probable prolyl 4-hydroxylase 9 OS=Arabidopsis thaliana GN=P4H9 PE=2 SV=1 | 36 | 244 | 4.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|6030 MARLLVNIAALSLTLRIATAGLQDDSGCRHPGYQVHLVSSSPLVMYLEGFLTADERAHLEHVGQGRFTDSAVLAA SGEAAIHNVRTSQSTAIQRDAVVECIEQRALSIQGFDRLASQLEPMQLVRYGPRQRYHFHTDWFTDPTHAAAQRG GNRASSIFGYVKAHNVTGGGTNFPLLNVPRNERWCRFVDCDAEYESGLTFRPVEGNAIYWDNMLEPGRGDERTLH AGLPVVTGDKIGINIWTREAPLPVELRGQGAAAGTSL* |
| Coding | >OphauG2|6030 ATGGCTCGTCTACTAGTGAATATTGCGGCGCTCAGCCTCACTCTCAGGATTGCAACAGCAGGCTTGCAAGACGAC AGCGGCTGCAGGCACCCTGGATACCAGGTGCATCTCGTCAGCTCGTCGCCGCTCGTCATGTACCTCGAGGGCTTT CTCACTGCCGACGAGAGAGCGCACCTCGAGCACGTAGGCCAAGGACGCTTCACCGACTCGGCGGTGCTGGCGGCA TCGGGCGAGGCAGCAATCCACAATGTGCGCACGTCGCAGTCAACGGCGATCCAGCGCGACGCAGTTGTAGAGTGC ATTGAGCAGAGAGCCCTGTCCATTCAAGGCTTTGATAGATTGGCGTCGCAGCTGGAGCCAATGCAGCTGGTGCGA TACGGCCCGCGCCAGCGCTACCACTTCCACACCGACTGGTTCACGGACCCGACACACGCAGCGGCACAGCGCGGG GGCAATCGGGCCAGCTCAATCTTTGGCTATGTCAAGGCGCACAATGTGACGGGAGGCGGCACAAACTTTCCGCTG CTCAATGTGCCGCGCAACGAGCGCTGGTGTCGCTTCGTCGACTGCGACGCCGAGTACGAGAGCGGCCTGACATTC CGGCCTGTCGAGGGCAACGCCATCTACTGGGACAATATGCTGGAGCCGGGCCGTGGCGACGAGCGCACGCTGCAC GCCGGGCTGCCCGTCGTCACCGGCGACAAGATTGGCATCAACATCTGGACGCGAGAGGCGCCGCTGCCAGTTGAG TTGCGAGGACAAGGAGCGGCGGCGGGCACGTCTTTGTAG |
| Transcript | >OphauG2|6030 ATGGCTCGTCTACTAGTGAATATTGCGGCGCTCAGCCTCACTCTCAGGATTGCAACAGCAGGCTTGCAAGACGAC AGCGGCTGCAGGCACCCTGGATACCAGGTGCATCTCGTCAGCTCGTCGCCGCTCGTCATGTACCTCGAGGGCTTT CTCACTGCCGACGAGAGAGCGCACCTCGAGCACGTAGGCCAAGGACGCTTCACCGACTCGGCGGTGCTGGCGGCA TCGGGCGAGGCAGCAATCCACAATGTGCGCACGTCGCAGTCAACGGCGATCCAGCGCGACGCAGTTGTAGAGTGC ATTGAGCAGAGAGCCCTGTCCATTCAAGGCTTTGATAGATTGGCGTCGCAGCTGGAGCCAATGCAGCTGGTGCGA TACGGCCCGCGCCAGCGCTACCACTTCCACACCGACTGGTTCACGGACCCGACACACGCAGCGGCACAGCGCGGG GGCAATCGGGCCAGCTCAATCTTTGGCTATGTCAAGGCGCACAATGTGACGGGAGGCGGCACAAACTTTCCGCTG CTCAATGTGCCGCGCAACGAGCGCTGGTGTCGCTTCGTCGACTGCGACGCCGAGTACGAGAGCGGCCTGACATTC CGGCCTGTCGAGGGCAACGCCATCTACTGGGACAATATGCTGGAGCCGGGCCGTGGCGACGAGCGCACGCTGCAC GCCGGGCTGCCCGTCGTCACCGGCGACAAGATTGGCATCAACATCTGGACGCGAGAGGCGCCGCTGCCAGTTGAG TTGCGAGGACAAGGAGCGGCGGCGGGCACGTCTTTGTAG |
| Gene | >OphauG2|6030 ATGGCTCGTCTACTAGTGAATATTGCGGCGCTCAGCCTCACTCTCAGGATTGCAACAGCAGGCTTGCAAGACGAC AGCGGCTGCAGGCACCCTGGATACCAGGTGCATCTCGTCAGCTCGTCGCCGCTCGTCATGTACCTCGAGGGCTTT CTCACTGCCGACGAGAGAGCGCACCTCGAGCACGTAGGGTAGGCAGCTTCCCAGGCAGCTCCTTGTGCAGCTTCT TCCAAGGCACGGCTGGGGCAAAGAGTCAAGACTGACAGACTGGTGACAGCCAAGGACGCTTCACCGACTCGGCGG TGCTGGCGGCATCGGGCGAGGCAGCAATCCACAATGTGCGCACGTCGCAGTCAACGGCGATCCAGCGCGACGCAG TTGTAGAGTGCATTGAGCAGAGAGCCCTGTCCATTCAAGGCTTTGATAGATTGGCGTCGCAGCTGGAGCCAATGC AGCTGGTGCGATACGGCCCGCGCCAGCGCTACCACTTCCACACCGACTGGTTCACGGACCCGACACACGCAGCGG CACAGCGCGGGGGCAATCGGGCCAGCTCAATCTTTGGCTATGTCAAGGCGCACAATGTGACGGGAGGCGGCACAA ACTTTCCGCTGCTCAATGTGCCGCGCAACGAGCGCTGGTGTCGCTTCGTCGACTGCGACGCCGAGTACGAGAGCG GCCTGACATTCCGGCCTGTCGAGGGCAACGCCATCTACTGGGACAATATGCTGGAGCCGGGCCGTGGCGACGAGC GCACGCTGCACGCCGGGCTGCCCGTCGTCACCGGCGACAAGATTGGCATCAACATCTGGACGCGAGAGGCGCCGC TGCCAGTTGAGTTGCGAGGACAAGGAGCGGCGGCGGGCACGTCTTTGTAG |