Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|603
Gene name
LocationContig_1147:1005..2053
Strand-
Gene length (bp)1048
Transcript length (bp)735
Coding sequence length (bp)735
Protein length (aa) 245

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PFAM Domains

(None)

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 24 243 2.0E-29
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 39 243 8.0E-24
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 38 242 1.0E-23
sp|D4B4P8|LYSM2_ARTBC LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03438 PE=3 SV=1 53 174 4.0E-16
sp|D4AZ68|LYSM3_ARTBC LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01488 PE=3 SV=1 101 243 2.0E-12
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 24 243 2.0E-29
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 39 243 8.0E-24
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 38 242 1.0E-23
sp|D4B4P8|LYSM2_ARTBC LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03438 PE=3 SV=1 53 174 4.0E-16
sp|D4AZ68|LYSM3_ARTBC LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01488 PE=3 SV=1 101 243 2.0E-12
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 189 243 7.0E-07
sp|D4B4P8|LYSM2_ARTBC LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03438 PE=3 SV=1 143 243 4.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|603
MPSLVLSLAVHLTTYCLTTTALTRHLPPTSPPASNSHSNCTGWYEYDAKRHYQDILAEYSITLEQFHQWNPSITS
TGKGLVLGHSYCVQGPSSTLNQSTVASSLPQASSAPRPVPIPQCTAFHSIQPGQHCWFLMQMYGTFTMQQFKSWN
PDIDPTCSRLWPGDSVCVGVDGTPTPRLSNGPQPIQSGVTPNCTKFHRATWRENCLLLATRENLALSDFYKWNPA
VRTPCANFFEGYHYCVSVS*
Coding >OphauG2|603
ATGCCGTCTCTTGTCCTCTCCCTTGCAGTCCATCTAACCACCTACTGCCTAACCACCACCGCCCTCACCCGACAT
TTGCCCCCCACCTCCCCCCCCGCCAGCAACAGCCACTCCAACTGCACCGGGTGGTATGAATACGACGCCAAGCGT
CACTACCAAGATATCCTCGCCGAATATTCAATCACTCTCGAGCAATTCCATCAATGGAATCCCTCCATCACCTCT
ACCGGCAAAGGCCTCGTCCTCGGCCATTCCTACTGCGTCCAAGGCCCGTCATCAACCCTCAACCAATCCACTGTC
GCTTCGTCTCTTCCCCAAGCCTCCTCTGCGCCCCGGCCCGTGCCCATCCCTCAATGCACCGCTTTCCACTCAATT
CAGCCCGGCCAGCATTGCTGGTTTCTGATGCAAATGTACGGCACCTTTACCATGCAGCAGTTCAAGTCATGGAAT
CCAGACATCGACCCAACCTGTAGTCGCCTCTGGCCGGGGGACAGCGTGTGCGTCGGCGTCGACGGCACGCCCACG
CCTCGCTTGTCCAATGGCCCCCAGCCCATACAGAGCGGCGTGACTCCCAATTGCACAAAGTTCCACCGAGCGACT
TGGAGAGAGAATTGCCTGCTCCTAGCCACGCGGGAAAACTTGGCCTTGTCAGACTTCTATAAATGGAACCCTGCT
GTCCGCACACCTTGTGCCAACTTTTTCGAGGGCTACCACTATTGCGTGAGCGTCTCGTAG
Transcript >OphauG2|603
ATGCCGTCTCTTGTCCTCTCCCTTGCAGTCCATCTAACCACCTACTGCCTAACCACCACCGCCCTCACCCGACAT
TTGCCCCCCACCTCCCCCCCCGCCAGCAACAGCCACTCCAACTGCACCGGGTGGTATGAATACGACGCCAAGCGT
CACTACCAAGATATCCTCGCCGAATATTCAATCACTCTCGAGCAATTCCATCAATGGAATCCCTCCATCACCTCT
ACCGGCAAAGGCCTCGTCCTCGGCCATTCCTACTGCGTCCAAGGCCCGTCATCAACCCTCAACCAATCCACTGTC
GCTTCGTCTCTTCCCCAAGCCTCCTCTGCGCCCCGGCCCGTGCCCATCCCTCAATGCACCGCTTTCCACTCAATT
CAGCCCGGCCAGCATTGCTGGTTTCTGATGCAAATGTACGGCACCTTTACCATGCAGCAGTTCAAGTCATGGAAT
CCAGACATCGACCCAACCTGTAGTCGCCTCTGGCCGGGGGACAGCGTGTGCGTCGGCGTCGACGGCACGCCCACG
CCTCGCTTGTCCAATGGCCCCCAGCCCATACAGAGCGGCGTGACTCCCAATTGCACAAAGTTCCACCGAGCGACT
TGGAGAGAGAATTGCCTGCTCCTAGCCACGCGGGAAAACTTGGCCTTGTCAGACTTCTATAAATGGAACCCTGCT
GTCCGCACACCTTGTGCCAACTTTTTCGAGGGCTACCACTATTGCGTGAGCGTCTCGTAG
Gene >OphauG2|603
ATGCCGTCTCTTGTCCTCTCCCTTGCAGTCCATCTAACCACCTACTGCCTAACCACCACCGCCCTCACCCGACAT
TTGCCCCCCACCTCCCCCCCCGCCAGCAACAGCCACTCCAACTGCACCGGGTGGTATGAATACGACGCCAAGCGT
CACTACCAAGATATCCTCGCCGAATATTCAATCACTCTCGAGCAATTCCATCAATGGGTAGACTCGCCACCTCTG
CCTTGCACTCTCCCTTGCACTCTCCTTTCCACTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTCTCCTTTCCACTCTCCCTACTAACCTCTC
GCAGAATCCCTCCATCACCTCTACCGGCAAAGGCCTCGTCCTCGGCCATTCCTACTGCGTCCAAGGCCCGTCATC
AACCCTCAACCAATCCACTGTCGCTTCGTCTCTTCCCCAAGCCTCCTCTGCGCCCCGGCCCGTGCCCATCCCTCA
ATGCACCGCTTTCCACTCAATTCAGCCCGGCCAGCATTGCTGGTTTCTGATGCAAATGTACGGCACCTTTACCAT
GCAGCAGTTCAAGTCATGGAATCCAGACATCGACCCAACCTGTAGTCGCCTCTGGCCGGGGGACAGCGTGTGCGT
CGGCGTCGACGGCACGCCCACGCCTCGCTTGTCCAATGGCCCCCAGCCCATACAGAGCGGCGTGACTCCCAATTG
CACAAAGTTCCACCGAGCGACTTGGAGAGAGAATTGCCTGCTCCTAGCCACGCGGGAAAACTTGGCCTTGTCAGA
CTTGTGAGCTCTTGTCTCTTCTTCAACATGGCTTGTCAGAGGCCACGAGAAGCTGATGAAGCATACATATGTATG
TACATACATAGCTATAAATGGAACCCTGCTGTCCGCACACGTGAGACGTCCCCTTCCACTGCACTGAGAAGCAAT
GCCAACTAATCCTCGGCTTTTAGCTTGTGCCAACTTTTTCGAGGGCTACCACTATTGCGTGAGCGTCTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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