Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|6016
Gene name
Location	Contig_59:32281..33436
Strand	-
Gene length (bp)	1155
Transcript length (bp)	1041
Coding sequence length (bp)	1041
Protein length (aa)	347

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O13938\|YEP4_SCHPO	UPF0658 Golgi apparatus membrane protein C23H3.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.04 PE=3 SV=3	12	312	1.0E-51
sp\|Q9UUJ8\|YLOA_SCHPO	UPF0658 Golgi apparatus membrane protein C1952.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1952.10c PE=3 SV=1	6	346	1.0E-34

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22
2	56	78	22
3	83	102	19
4	109	126	17
5	136	158	22
6	185	207	22
7	217	236	19
8	243	261	18
9	281	303	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|6016 MGFLHSKWPAAFMAVTGVQALICLGFESYVFAKFQTSLASKQLSTDATVQSQYKTIPTFLTLFIFGFLYELVVVW DALRMKNTIQVIGVCIANLALLVYTAIQVDQIQAAIFVLGSSGALKSRFTAQDVLSDVKPFLIAIPAIIALATVI MVFIAWKLYQEFAWDILKNIGADYRMKKRFLDYQIYIALLKFDFFFFLGFIIQFVVIVAQKSDPEFALTIATIPI TIIILLLAAYFTRRESKWGMIAVIVLYFGGLTYFIFKLVRIYDPKTRDEYMAVRKSLTAFAVITILLIILTIVNA IICMRNFNNGLKMHLQSPRREEEKPDMHSISLHDVKPQLPSRMTID*
Coding	>OphauG2\|6016 ATGGGTTTTCTTCACTCAAAATGGCCCGCTGCCTTTATGGCTGTCACAGGTGTCCAAGCCCTAATATGCTTGGGC TTTGAATCATATGTCTTTGCCAAGTTCCAGACGAGCCTGGCCTCCAAACAACTCTCAACCGACGCCACCGTGCAG TCGCAGTACAAGACAATTCCCACCTTTTTGACTCTCTTCATTTTTGGTTTCCTCTACGAGCTCGTCGTTGTCTGG GACGCCCTGCGCATGAAGAATACTATTCAAGTCATTGGCGTCTGTATCGCCAACCTCGCTCTCTTAGTCTACACC GCCATTCAAGTCGATCAGATACAGGCGGCAATCTTTGTATTGGGTTCCAGTGGTGCCCTCAAGAGCCGTTTCACC GCCCAAGACGTCTTGTCTGATGTCAAACCCTTCCTCATCGCCATACCTGCCATTATTGCCTTGGCCACGGTTATC ATGGTATTTATTGCATGGAAGCTCTATCAAGAATTTGCCTGGGATATTCTCAAGAATATTGGCGCAGATTATCGC ATGAAGAAGCGCTTTCTTGACTATCAGATCTATATTGCCCTGCTTAAATTCGACTTTTTCTTCTTCCTTGGATTC ATTATCCAATTCGTCGTTATCGTCGCCCAAAAGTCGGACCCCGAGTTTGCGCTGACTATTGCCACCATACCCATC ACCATTATAATCCTCCTCCTTGCCGCCTATTTCACCCGTAGGGAGAGCAAATGGGGAATGATTGCCGTCATCGTT CTCTACTTTGGCGGTCTCACCTACTTCATTTTCAAACTTGTTCGCATCTACGACCCGAAAACTCGAGACGAATAC ATGGCCGTTCGCAAGTCTCTCACAGCGTTTGCCGTCATCACCATCCTCTTGATCATCCTCACCATTGTCAATGCC ATAATTTGCATGCGCAACTTTAATAATGGCCTCAAGATGCACTTGCAGTCGCCACGAAGAGAGGAAGAGAAGCCC GACATGCACTCCATCAGCCTGCACGACGTCAAGCCTCAACTACCTAGTCGCATGACGATTGACTGA
Transcript	>OphauG2\|6016 ATGGGTTTTCTTCACTCAAAATGGCCCGCTGCCTTTATGGCTGTCACAGGTGTCCAAGCCCTAATATGCTTGGGC TTTGAATCATATGTCTTTGCCAAGTTCCAGACGAGCCTGGCCTCCAAACAACTCTCAACCGACGCCACCGTGCAG TCGCAGTACAAGACAATTCCCACCTTTTTGACTCTCTTCATTTTTGGTTTCCTCTACGAGCTCGTCGTTGTCTGG GACGCCCTGCGCATGAAGAATACTATTCAAGTCATTGGCGTCTGTATCGCCAACCTCGCTCTCTTAGTCTACACC GCCATTCAAGTCGATCAGATACAGGCGGCAATCTTTGTATTGGGTTCCAGTGGTGCCCTCAAGAGCCGTTTCACC GCCCAAGACGTCTTGTCTGATGTCAAACCCTTCCTCATCGCCATACCTGCCATTATTGCCTTGGCCACGGTTATC ATGGTATTTATTGCATGGAAGCTCTATCAAGAATTTGCCTGGGATATTCTCAAGAATATTGGCGCAGATTATCGC ATGAAGAAGCGCTTTCTTGACTATCAGATCTATATTGCCCTGCTTAAATTCGACTTTTTCTTCTTCCTTGGATTC ATTATCCAATTCGTCGTTATCGTCGCCCAAAAGTCGGACCCCGAGTTTGCGCTGACTATTGCCACCATACCCATC ACCATTATAATCCTCCTCCTTGCCGCCTATTTCACCCGTAGGGAGAGCAAATGGGGAATGATTGCCGTCATCGTT CTCTACTTTGGCGGTCTCACCTACTTCATTTTCAAACTTGTTCGCATCTACGACCCGAAAACTCGAGACGAATAC ATGGCCGTTCGCAAGTCTCTCACAGCGTTTGCCGTCATCACCATCCTCTTGATCATCCTCACCATTGTCAATGCC ATAATTTGCATGCGCAACTTTAATAATGGCCTCAAGATGCACTTGCAGTCGCCACGAAGAGAGGAAGAGAAGCCC GACATGCACTCCATCAGCCTGCACGACGTCAAGCCTCAACTACCTAGTCGCATGACGATTGACTGA
Gene	>OphauG2\|6016 ATGGGTTTTCTTCACTCAAAATGGCCCGCTGCCTTTATGGCTGTCACAGGTGTCCAAGCCCTAATATGCTTGGGC TTTGAATCGTGAGTTGTATTCGACTCTTTGCCCCAGGCACTTGACTTATCTTCCTCTTTCCAGATATGTCTTTGC CAAGTTCCAGACGAGCCTGGCCTCCAAACAACTCTCAACCGACGCCACCGTGCAGTCGCAGTACAAGACAATTCC CACCTTTTTGACTCTCTTCATTTTTGGTTTCCTCTACGAGCTCGTCGTTGTCTGGGACGCCCTGCGCATGAAGAA TACTATTCAAGTCATTGGCGTCTGTATCGCCAACCTCGCTCTCTTAGTCTACACCGCCATTCAAGTCGATCAGAT ACAGGCGGCAATCTTTGTATTGGGTTCCAGTGGTGCCCTCAAGAGCCGTTTCACCGCCCAAGACGTCTTGTCTGA TGTCAAACCCTTCCTCATCGCCATACCTGCCATTATTGCCTTGGCCACGGTTATCATGGTATTTATTGCATGGAA GCTCTATCAAGAATTTGCCTGGGATATTCTCAAGAATATTGGCGCAGATTATCGCATGAAGAAGCGCTTTCTTGA CTATCAGGTGGGCTCGACTTGTCTATTCTGCCTACACCCTTATACTTATGCTTCTTTTCCTCACAGATCTATATT GCCCTGCTTAAATTCGACTTTTTCTTCTTCCTTGGATTCATTATCCAATTCGTCGTTATCGTCGCCCAAAAGTCG GACCCCGAGTTTGCGCTGACTATTGCCACCATACCCATCACCATTATAATCCTCCTCCTTGCCGCCTATTTCACC CGTAGGGAGAGCAAATGGGGAATGATTGCCGTCATCGTTCTCTACTTTGGCGGTCTCACCTACTTCATTTTCAAA CTTGTTCGCATCTACGACCCGAAAACTCGAGACGAATACATGGCCGTTCGCAAGTCTCTCACAGCGTTTGCCGTC ATCACCATCCTCTTGATCATCCTCACCATTGTCAATGCCATAATTTGCATGCGCAACTTTAATAATGGCCTCAAG ATGCACTTGCAGTCGCCACGAAGAGAGGAAGAGAAGCCCGACATGCACTCCATCAGCCTGCACGACGTCAAGCCT CAACTACCTAGTCGCATGACGATTGACTGA

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