Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|600
Gene name
LocationContig_1146:1556..3086
Strand+
Gene length (bp)1530
Transcript length (bp)1530
Coding sequence length (bp)1530
Protein length (aa) 510

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02373 JmjC JmjC domain, hydroxylase 4.2E-19 312 414

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q6B0I6|KDM4D_HUMAN Lysine-specific demethylase 4D OS=Homo sapiens GN=KDM4D PE=1 SV=3 143 480 1.0E-23
sp|Q3U2K5|KDM4D_MOUSE Lysine-specific demethylase 4D OS=Mus musculus GN=Kdm4d PE=2 SV=2 143 420 3.0E-23
sp|A1A5Q5|KDM4D_RAT Lysine-specific demethylase 4D OS=Rattus norvegicus GN=Kdm4d PE=2 SV=1 143 420 2.0E-22
sp|O94953|KDM4B_HUMAN Lysine-specific demethylase 4B OS=Homo sapiens GN=KDM4B PE=1 SV=4 136 420 1.0E-21
sp|Q91VY5|KDM4B_MOUSE Lysine-specific demethylase 4B OS=Mus musculus GN=Kdm4b PE=2 SV=1 136 420 2.0E-21
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q6B0I6|KDM4D_HUMAN Lysine-specific demethylase 4D OS=Homo sapiens GN=KDM4D PE=1 SV=3 143 480 1.0E-23
sp|Q3U2K5|KDM4D_MOUSE Lysine-specific demethylase 4D OS=Mus musculus GN=Kdm4d PE=2 SV=2 143 420 3.0E-23
sp|A1A5Q5|KDM4D_RAT Lysine-specific demethylase 4D OS=Rattus norvegicus GN=Kdm4d PE=2 SV=1 143 420 2.0E-22
sp|O94953|KDM4B_HUMAN Lysine-specific demethylase 4B OS=Homo sapiens GN=KDM4B PE=1 SV=4 136 420 1.0E-21
sp|Q91VY5|KDM4B_MOUSE Lysine-specific demethylase 4B OS=Mus musculus GN=Kdm4b PE=2 SV=1 136 420 2.0E-21
sp|B2RXH2|KDM4E_HUMAN Lysine-specific demethylase 4E OS=Homo sapiens GN=KDM4E PE=1 SV=1 141 485 9.0E-21
sp|Q8VCD7|KDM4C_MOUSE Lysine-specific demethylase 4C OS=Mus musculus GN=Kdm4c PE=1 SV=1 143 420 4.0E-19
sp|Q8BW72|KDM4A_MOUSE Lysine-specific demethylase 4A OS=Mus musculus GN=Kdm4a PE=1 SV=3 143 433 7.0E-19
sp|Q9H3R0|KDM4C_HUMAN Lysine-specific demethylase 4C OS=Homo sapiens GN=KDM4C PE=1 SV=2 143 420 1.0E-18
sp|Q9V6L0|KDM4B_DROME Probable lysine-specific demethylase 4B OS=Drosophila melanogaster GN=Kdm4B PE=3 SV=3 145 432 2.0E-18
sp|O75164|KDM4A_HUMAN Lysine-specific demethylase 4A OS=Homo sapiens GN=KDM4A PE=1 SV=2 143 433 2.0E-18
sp|Q5RD88|KDM4A_PONAB Lysine-specific demethylase 4A OS=Pongo abelii GN=KDM4A PE=2 SV=1 143 433 2.0E-18
sp|Q9U297|KDM4_CAEEL Lysine-specific demethylase 4 OS=Caenorhabditis elegans GN=jmjd-2 PE=3 SV=2 286 420 1.0E-17
sp|Q9V333|KDM4A_DROME Probable lysine-specific demethylase 4A OS=Drosophila melanogaster GN=Kdm4A PE=1 SV=1 295 420 9.0E-15
sp|Q9STM3|REF6_ARATH Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6 PE=1 SV=1 285 420 4.0E-13
sp|P39956|RPH1_YEAST DNA damage-responsive transcriptional repressor RPH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPH1 PE=1 SV=1 289 422 1.0E-12
sp|Q30DN6|KDM5D_CANLF Lysine-specific demethylase 5D OS=Canis lupus familiaris GN=KDM5D PE=2 SV=1 294 486 2.0E-12
sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2 294 486 2.0E-12
sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2 296 476 6.0E-12
sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3 296 476 7.0E-12
sp|A1YVX4|KDM5C_PIG Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1 293 508 8.0E-12
sp|Q10RP4|SE14_ORYSJ Lysine-specific demethylase SE14 OS=Oryza sativa subsp. japonica GN=SE14 PE=3 SV=2 296 420 8.0E-12
sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2 293 508 9.0E-12
sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=1 SV=4 294 486 9.0E-12
sp|Q38JA7|KDM5C_CANLF Lysine-specific demethylase 5C OS=Canis lupus familiaris GN=KDM5C PE=2 SV=1 293 508 1.0E-11
sp|Q8GUI6|JMJ14_ARATH Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 PE=1 SV=1 257 420 1.0E-11
sp|Q53WJ1|JM703_ORYSJ Lysine-specific demethylase JMJ703 OS=Oryza sativa subsp. japonica GN=JMJ703 PE=1 SV=1 209 429 1.0E-11
sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2 SV=1 293 429 2.0E-11
sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2 293 429 2.0E-11
sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid PE=1 SV=1 273 420 4.0E-11
sp|C0SUT9|JMJ16_ARATH Putative lysine-specific demethylase JMJ16 OS=Arabidopsis thaliana GN=JMJ16 PE=2 SV=1 284 433 8.0E-11
sp|O64752|JMJ15_ARATH Lysine-specific demethylase JMJ15 OS=Arabidopsis thaliana GN=JMJ15 PE=2 SV=1 284 420 1.0E-10
sp|Q336N8|JM706_ORYSJ Lysine-specific demethylase JMJ706 OS=Oryza sativa subsp. japonica GN=JMJ706 PE=2 SV=1 284 422 1.0E-10
sp|Q6BDA0|ELF6_ARATH Probable lysine-specific demethylase ELF6 OS=Arabidopsis thaliana GN=ELF6 PE=1 SV=1 296 420 1.0E-10
sp|Q23541|KDM5_CAEEL Lysine-specific demethylase rbr-2 OS=Caenorhabditis elegans GN=rbr-2 PE=1 SV=2 296 431 4.0E-10
sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1 294 429 5.0E-10
sp|Q5N712|JM705_ORYSJ Lysine-specific demethylase JMJ705 OS=Oryza sativa subsp. japonica GN=JMJ705 PE=1 SV=1 286 420 5.0E-10
sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae GN=rbr-2 PE=3 SV=2 296 420 5.0E-10
sp|F4I6G4|JMJ18_ARATH Lysine-specific demethylase JMJ18 OS=Arabidopsis thaliana GN=JMJ18 PE=2 SV=1 284 465 7.0E-10
sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3 294 429 2.0E-09
sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1 294 429 2.0E-09
sp|Q9US53|JMJ2_SCHPO Jumonji/ARID domain-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=jmj2 PE=3 SV=1 296 420 3.0E-09
sp|Q6IQX0|KD5BB_DANRE Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2 294 426 4.0E-09
sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JHD2 PE=1 SV=1 289 425 4.0E-08
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|600
MAVPDCLDTPPIVPQGQSVSNLGPAAPATTHDSTLARATASILCRDAAPSATLASHSLPPLCAPDTTPVPTQSSP
RDCPQSMTCGASHATADAVSFAAPLEPPPTQSPAATDQHRPTPHVLETPIPPGFAIDHDFDHVNQHGILRLKPSR
AQWEDFPSILAYARSLGVENDGCFKVTIPHGIHDLLPEKEPKTVPANAYKVKQMRRTTYWQVSTVPSDGEFSSAD
SASQYSGTVNAAFKNLRRLFKTNKNRQMRNVRYRVDVPAWTAKQRREAGVPERSPIHPLKGDKLDLTKAIIPGIH
TPYVYESGPSFGATFQIHAEDFRLASLNHLYKGRKIWVVVPATAVHVAEHALGRGEGCSQFMRHRAEFFFPDRLD
KMGIPYRLVDQRPGETIVILPDAYHEGFSTGYTIAEAKNYADARWSPESYQPCEESCQLATAIPAAFMRPVAADE
PRLDLCAAYGDCKPMLTPHEPKVELKRRLDEFLDDKRHASEQQQGAALAQESSVKRIKV*
Coding >OphauG2|600
ATGGCTGTTCCTGATTGCCTCGACACCCCTCCAATCGTCCCCCAGGGCCAGTCCGTCAGCAACCTAGGCCCCGCC
GCCCCAGCCACCACTCATGATTCAACTTTGGCCCGCGCCACTGCCTCAATCCTTTGTCGAGATGCTGCACCTAGT
GCCACCCTTGCATCCCACTCCCTCCCTCCATTGTGCGCCCCGGACACCACCCCTGTTCCCACGCAATCGAGTCCT
CGAGACTGTCCACAATCCATGACGTGTGGCGCGTCCCATGCCACTGCAGACGCCGTTTCTTTTGCCGCACCCCTG
GAGCCGCCACCCACCCAAAGCCCTGCTGCTACCGACCAACACCGGCCAACACCCCACGTCCTGGAAACCCCCATT
CCCCCCGGCTTTGCCATTGACCACGACTTCGATCACGTCAATCAACATGGCATCCTGCGCCTCAAGCCCTCCCGC
GCCCAATGGGAAGACTTTCCATCCATTCTGGCCTATGCTCGAAGCCTCGGTGTCGAAAACGATGGCTGCTTCAAA
GTCACTATCCCACACGGCATCCACGACTTGCTCCCGGAAAAGGAGCCCAAGACGGTTCCTGCAAACGCCTACAAA
GTCAAGCAAATGCGAAGAACAACCTATTGGCAGGTTAGCACTGTGCCTTCTGACGGCGAGTTTAGCTCAGCAGAC
TCTGCCTCCCAGTACTCGGGAACCGTCAATGCCGCCTTCAAGAACCTCCGAAGGCTCTTCAAGACCAACAAGAAC
CGCCAAATGCGCAACGTGAGGTATAGGGTTGACGTGCCCGCCTGGACTGCAAAGCAAAGACGAGAGGCTGGTGTG
CCGGAGCGAAGCCCCATTCATCCCCTCAAAGGCGACAAGCTGGACCTTACAAAGGCCATCATTCCGGGAATCCAC
ACCCCCTACGTGTACGAGAGCGGCCCTTCTTTTGGCGCCACTTTTCAGATACATGCTGAAGATTTCCGCCTCGCC
TCGCTAAACCATCTGTATAAAGGTCGCAAGATTTGGGTCGTGGTGCCCGCGACTGCTGTCCACGTCGCCGAGCAC
GCACTTGGCCGTGGCGAGGGCTGCTCGCAGTTCATGCGCCACCGCGCCGAATTCTTCTTTCCAGACCGACTCGAC
AAAATGGGCATCCCATATCGCCTAGTTGATCAGCGTCCCGGCGAAACCATAGTCATTCTCCCCGACGCCTATCAC
GAGGGCTTTAGCACGGGATATACCATTGCCGAGGCCAAGAACTATGCCGATGCGCGCTGGAGCCCCGAGTCATAT
CAGCCATGTGAAGAGAGTTGCCAGCTGGCAACTGCTATTCCAGCAGCCTTTATGCGCCCAGTTGCTGCCGACGAG
CCTAGACTCGATCTCTGTGCGGCATATGGCGACTGCAAGCCGATGCTGACCCCGCACGAACCCAAAGTGGAACTA
AAGAGAAGGCTAGATGAATTTCTTGACGACAAGCGACACGCCTCGGAACAGCAACAAGGAGCTGCTTTGGCGCAA
GAATCGAGTGTTAAACGCATCAAGGTGTGA
Transcript >OphauG2|600
ATGGCTGTTCCTGATTGCCTCGACACCCCTCCAATCGTCCCCCAGGGCCAGTCCGTCAGCAACCTAGGCCCCGCC
GCCCCAGCCACCACTCATGATTCAACTTTGGCCCGCGCCACTGCCTCAATCCTTTGTCGAGATGCTGCACCTAGT
GCCACCCTTGCATCCCACTCCCTCCCTCCATTGTGCGCCCCGGACACCACCCCTGTTCCCACGCAATCGAGTCCT
CGAGACTGTCCACAATCCATGACGTGTGGCGCGTCCCATGCCACTGCAGACGCCGTTTCTTTTGCCGCACCCCTG
GAGCCGCCACCCACCCAAAGCCCTGCTGCTACCGACCAACACCGGCCAACACCCCACGTCCTGGAAACCCCCATT
CCCCCCGGCTTTGCCATTGACCACGACTTCGATCACGTCAATCAACATGGCATCCTGCGCCTCAAGCCCTCCCGC
GCCCAATGGGAAGACTTTCCATCCATTCTGGCCTATGCTCGAAGCCTCGGTGTCGAAAACGATGGCTGCTTCAAA
GTCACTATCCCACACGGCATCCACGACTTGCTCCCGGAAAAGGAGCCCAAGACGGTTCCTGCAAACGCCTACAAA
GTCAAGCAAATGCGAAGAACAACCTATTGGCAGGTTAGCACTGTGCCTTCTGACGGCGAGTTTAGCTCAGCAGAC
TCTGCCTCCCAGTACTCGGGAACCGTCAATGCCGCCTTCAAGAACCTCCGAAGGCTCTTCAAGACCAACAAGAAC
CGCCAAATGCGCAACGTGAGGTATAGGGTTGACGTGCCCGCCTGGACTGCAAAGCAAAGACGAGAGGCTGGTGTG
CCGGAGCGAAGCCCCATTCATCCCCTCAAAGGCGACAAGCTGGACCTTACAAAGGCCATCATTCCGGGAATCCAC
ACCCCCTACGTGTACGAGAGCGGCCCTTCTTTTGGCGCCACTTTTCAGATACATGCTGAAGATTTCCGCCTCGCC
TCGCTAAACCATCTGTATAAAGGTCGCAAGATTTGGGTCGTGGTGCCCGCGACTGCTGTCCACGTCGCCGAGCAC
GCACTTGGCCGTGGCGAGGGCTGCTCGCAGTTCATGCGCCACCGCGCCGAATTCTTCTTTCCAGACCGACTCGAC
AAAATGGGCATCCCATATCGCCTAGTTGATCAGCGTCCCGGCGAAACCATAGTCATTCTCCCCGACGCCTATCAC
GAGGGCTTTAGCACGGGATATACCATTGCCGAGGCCAAGAACTATGCCGATGCGCGCTGGAGCCCCGAGTCATAT
CAGCCATGTGAAGAGAGTTGCCAGCTGGCAACTGCTATTCCAGCAGCCTTTATGCGCCCAGTTGCTGCCGACGAG
CCTAGACTCGATCTCTGTGCGGCATATGGCGACTGCAAGCCGATGCTGACCCCGCACGAACCCAAAGTGGAACTA
AAGAGAAGGCTAGATGAATTTCTTGACGACAAGCGACACGCCTCGGAACAGCAACAAGGAGCTGCTTTGGCGCAA
GAATCGAGTGTTAAACGCATCAAGGTGTGA
Gene >OphauG2|600
ATGGCTGTTCCTGATTGCCTCGACACCCCTCCAATCGTCCCCCAGGGCCAGTCCGTCAGCAACCTAGGCCCCGCC
GCCCCAGCCACCACTCATGATTCAACTTTGGCCCGCGCCACTGCCTCAATCCTTTGTCGAGATGCTGCACCTAGT
GCCACCCTTGCATCCCACTCCCTCCCTCCATTGTGCGCCCCGGACACCACCCCTGTTCCCACGCAATCGAGTCCT
CGAGACTGTCCACAATCCATGACGTGTGGCGCGTCCCATGCCACTGCAGACGCCGTTTCTTTTGCCGCACCCCTG
GAGCCGCCACCCACCCAAAGCCCTGCTGCTACCGACCAACACCGGCCAACACCCCACGTCCTGGAAACCCCCATT
CCCCCCGGCTTTGCCATTGACCACGACTTCGATCACGTCAATCAACATGGCATCCTGCGCCTCAAGCCCTCCCGC
GCCCAATGGGAAGACTTTCCATCCATTCTGGCCTATGCTCGAAGCCTCGGTGTCGAAAACGATGGCTGCTTCAAA
GTCACTATCCCACACGGCATCCACGACTTGCTCCCGGAAAAGGAGCCCAAGACGGTTCCTGCAAACGCCTACAAA
GTCAAGCAAATGCGAAGAACAACCTATTGGCAGGTTAGCACTGTGCCTTCTGACGGCGAGTTTAGCTCAGCAGAC
TCTGCCTCCCAGTACTCGGGAACCGTCAATGCCGCCTTCAAGAACCTCCGAAGGCTCTTCAAGACCAACAAGAAC
CGCCAAATGCGCAACGTGAGGTATAGGGTTGACGTGCCCGCCTGGACTGCAAAGCAAAGACGAGAGGCTGGTGTG
CCGGAGCGAAGCCCCATTCATCCCCTCAAAGGCGACAAGCTGGACCTTACAAAGGCCATCATTCCGGGAATCCAC
ACCCCCTACGTGTACGAGAGCGGCCCTTCTTTTGGCGCCACTTTTCAGATACATGCTGAAGATTTCCGCCTCGCC
TCGCTAAACCATCTGTATAAAGGTCGCAAGATTTGGGTCGTGGTGCCCGCGACTGCTGTCCACGTCGCCGAGCAC
GCACTTGGCCGTGGCGAGGGCTGCTCGCAGTTCATGCGCCACCGCGCCGAATTCTTCTTTCCAGACCGACTCGAC
AAAATGGGCATCCCATATCGCCTAGTTGATCAGCGTCCCGGCGAAACCATAGTCATTCTCCCCGACGCCTATCAC
GAGGGCTTTAGCACGGGATATACCATTGCCGAGGCCAAGAACTATGCCGATGCGCGCTGGAGCCCCGAGTCATAT
CAGCCATGTGAAGAGAGTTGCCAGCTGGCAACTGCTATTCCAGCAGCCTTTATGCGCCCAGTTGCTGCCGACGAG
CCTAGACTCGATCTCTGTGCGGCATATGGCGACTGCAAGCCGATGCTGACCCCGCACGAACCCAAAGTGGAACTA
AAGAGAAGGCTAGATGAATTTCTTGACGACAAGCGACACGCCTCGGAACAGCAACAAGGAGCTGCTTTGGCGCAA
GAATCGAGTGTTAAACGCATCAAGGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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