Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5991
Gene name
LocationContig_585:10959..11871
Strand-
Gene length (bp)912
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 3.4E-06 8 145
PF05368 NmrA NmrA-like family 4.6E-06 5 228

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1 5 240 7.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5991
MRVAIAGAGDLARYLCDEFIKAGHEIVILSRSHRPYLDGLPITQVITDYSLDSLRTPLADCQVLISTIGDFTSSN
VNVHCAMLQACQQSPQCKRFIPSEFGGDIESFPDQPSFVYPARKDIRKALQDQTDVEWTLVANGWLADYTVPSQN
RYIRDIDNLCPINLTGGSIVVPGSGREPIDLTWARDVAKALAELVNKPAWEPYTFISGERTCWNHVASIVQQRYG
QKITMSHQSLTEIVECARAAKDQDALLVAESQLYSLSHASALPEDRVQAQRSKYFPGLHFRTLQEGLAALDGDSD
IIV*
Coding >OphauG2|5991
ATGCGCGTGGCAATTGCTGGTGCCGGCGACTTGGCTCGCTACCTATGCGACGAGTTCATCAAGGCCGGCCACGAA
ATCGTCATTTTGTCGCGATCCCACAGACCGTACCTTGACGGTCTACCCATCACCCAAGTCATCACAGACTACTCT
CTTGACTCGCTTCGCACCCCGCTGGCCGACTGCCAAGTCCTCATCTCCACCATTGGCGACTTTACCTCTTCAAAC
GTAAACGTCCACTGCGCCATGCTCCAAGCCTGTCAGCAAAGCCCCCAATGCAAGCGCTTCATCCCATCCGAGTTT
GGCGGAGACATTGAGTCCTTTCCTGACCAGCCATCCTTTGTTTATCCCGCCCGGAAAGATATTCGCAAGGCTCTG
CAAGACCAGACCGATGTCGAGTGGACTCTGGTCGCCAACGGCTGGCTGGCCGACTACACCGTGCCGTCTCAGAAC
CGCTACATCAGAGACATTGACAATCTCTGCCCCATCAATCTCACTGGCGGCTCCATTGTGGTTCCAGGATCTGGG
AGGGAACCCATCGACTTGACCTGGGCTCGAGACGTTGCCAAGGCGCTGGCAGAGCTCGTCAACAAGCCCGCCTGG
GAGCCCTATACCTTTATTTCCGGAGAGCGCACCTGCTGGAATCATGTCGCCAGCATTGTTCAACAGAGATATGGC
CAGAAAATCACAATGTCCCACCAATCGCTGACGGAAATTGTCGAGTGCGCTAGAGCAGCCAAGGACCAAGATGCC
CTGCTTGTTGCCGAGTCTCAGCTGTATTCGTTGAGCCACGCAAGCGCCTTGCCTGAGGACAGGGTGCAAGCTCAG
AGAAGCAAGTATTTCCCGGGACTCCACTTCCGAACCCTACAAGAAGGGTTGGCTGCGTTGGATGGGGATTCGGAC
ATTATTGTGTAG
Transcript >OphauG2|5991
ATGCGCGTGGCAATTGCTGGTGCCGGCGACTTGGCTCGCTACCTATGCGACGAGTTCATCAAGGCCGGCCACGAA
ATCGTCATTTTGTCGCGATCCCACAGACCGTACCTTGACGGTCTACCCATCACCCAAGTCATCACAGACTACTCT
CTTGACTCGCTTCGCACCCCGCTGGCCGACTGCCAAGTCCTCATCTCCACCATTGGCGACTTTACCTCTTCAAAC
GTAAACGTCCACTGCGCCATGCTCCAAGCCTGTCAGCAAAGCCCCCAATGCAAGCGCTTCATCCCATCCGAGTTT
GGCGGAGACATTGAGTCCTTTCCTGACCAGCCATCCTTTGTTTATCCCGCCCGGAAAGATATTCGCAAGGCTCTG
CAAGACCAGACCGATGTCGAGTGGACTCTGGTCGCCAACGGCTGGCTGGCCGACTACACCGTGCCGTCTCAGAAC
CGCTACATCAGAGACATTGACAATCTCTGCCCCATCAATCTCACTGGCGGCTCCATTGTGGTTCCAGGATCTGGG
AGGGAACCCATCGACTTGACCTGGGCTCGAGACGTTGCCAAGGCGCTGGCAGAGCTCGTCAACAAGCCCGCCTGG
GAGCCCTATACCTTTATTTCCGGAGAGCGCACCTGCTGGAATCATGTCGCCAGCATTGTTCAACAGAGATATGGC
CAGAAAATCACAATGTCCCACCAATCGCTGACGGAAATTGTCGAGTGCGCTAGAGCAGCCAAGGACCAAGATGCC
CTGCTTGTTGCCGAGTCTCAGCTGTATTCGTTGAGCCACGCAAGCGCCTTGCCTGAGGACAGGGTGCAAGCTCAG
AGAAGCAAGTATTTCCCGGGACTCCACTTCCGAACCCTACAAGAAGGGTTGGCTGCGTTGGATGGGGATTCGGAC
ATTATTGTGTAG
Gene >OphauG2|5991
ATGCGCGTGGCAATTGCTGGTGCCGGCGACTTGGCTCGCTACCTATGCGACGAGTTCATCAAGGCCGGCCACGAA
ATCGTCATTTTGTCGCGATCCCACAGACCGTACCTTGACGGTCTACCCATCACCCAAGTCATCACAGACTACTCT
CTTGACTCGCTTCGCACCCCGCTGGCCGACTGCCAAGTCCTCATCTCCACCATTGGCGACTTTACCTCTTCAAAC
GTAAACGTCCACTGCGCCATGCTCCAAGCCTGTCAGCAAAGCCCCCAATGCAAGCGCTTCATCCCATCCGAGTTT
GGCGGAGACATTGAGTCCTTTCCTGACCAGCCATCCTTTGTTTATCCCGCCCGGAAAGATATTCGCAAGGCTCTG
CAAGACCAGACCGATGTCGAGTGGACTCTGGTCGCCAACGGCTGGCTGGCCGACTACACCGTGCCGTCTCAGAAC
CGCTACATCAGAGACATTGACAATCTCTGCCCCATCAATCTCACTGGCGGCTCCATTGTGGTTCCAGGATCTGGG
AGGGAACCCATCGACTTGACCTGGGCTCGAGACGTTGCCAAGGCGCTGGCAGAGCTCGTCAACAAGCCCGCCTGG
GAGCCCTATACCTTTATTTCCGGAGAGCGCACCTGCTGGAATCATGTCGCCAGCATTGTTCAACAGAGATATGGC
CAGAAAATCACAATGTCCCACCAATCGCTGACGGAAATTGTCGAGTGCGCTAGAGCAGCCAAGGACCAAGATGCC
CTGCTTGTTGCCGAGTCTCAGCTGTATTCGTTGAGCCACGCAAGCGCCTTGCCTGAGGACAGGGTGCAAGCTCAG
AGAAGCAAGTATTTCCCGGGACTCCACTTCCGAACCCTACAAGAAGGGTTGGCTGCGTTGGATGGGGATTCGGAC
ATTATTGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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