© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5976 |
| Gene name | |
| Location | Contig_583:1342..2487 |
| Strand | + |
| Gene length (bp) | 1145 |
| Transcript length (bp) | 1092 |
| Coding sequence length (bp) | 1092 |
| Protein length (aa) | 364 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09451 | ATG27 | Autophagy-related protein 27 | 4.1E-88 | 13 | 359 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B086|ATG27_ARTBC | Autophagy-related protein 27 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01857 PE=1 SV=1 | 19 | 309 | 3.0E-28 |
| sp|Q6CBS9|ATG27_YARLI | Autophagy-related protein 27 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG27 PE=3 SV=1 | 260 | 363 | 1.0E-23 |
| sp|A7KAK7|ATG27_PICAN | Autophagy-related protein 27 OS=Pichia angusta GN=ATG27 PE=3 SV=1 | 255 | 363 | 7.0E-12 |
| sp|Q5A5S7|ATG27_CANAL | Autophagy-related protein 27 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ATG27 PE=3 SV=1 | 9 | 363 | 2.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 292 | 314 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5976 MRGPQPSALALSLLLTLKLGAAMLRCDNVRVDGHSFDLSKLGGPHSVVTTRYESLPNVHHNVTYTLDICKPLKKS GKAKKSEECPNGTRGAFLVQHGQEQEPAELTGTVCAISRFLQGETDVVEQVVAIAGSLENVGGSQFEYDATRLKT SDSNSDSQKEGLRLVLKGGKHPLDGPVNERREQRAVVEFLCDPNRTGDEGEWEAEDEYDKNAKLRARADDDDGGK DDGQDRSALEHQLKKDNAALLWESFEDEKDAKVLRLTWHTKYACEKREDGGGSDDKGDGSTSSHWGFFTWFVVIV FLGIAAYLIFGSWLNYNRYGARGWDLVPHGDTIRDIPYLMKDWVRRVLNTVQGAGSRGGYSAV* |
| Coding | >OphauG2|5976 ATGCGCGGGCCACAGCCGTCAGCGCTTGCTCTGTCGCTGCTGCTAACACTGAAGCTGGGCGCGGCGATGCTGAGA TGCGACAACGTGCGGGTAGATGGGCATAGCTTCGACCTGTCCAAGCTCGGAGGGCCGCACTCAGTGGTGACGACG CGCTACGAGTCGTTGCCCAATGTGCACCACAACGTGACGTATACGCTCGATATTTGCAAGCCGCTCAAGAAGAGC GGCAAGGCCAAAAAGTCGGAGGAGTGCCCCAACGGGACTCGAGGTGCGTTTTTGGTGCAGCATGGACAGGAACAG GAGCCTGCAGAGCTAACCGGGACAGTGTGTGCCATTTCACGTTTTCTACAGGGCGAGACGGACGTGGTGGAGCAA GTAGTGGCGATAGCTGGCTCTCTGGAAAACGTGGGGGGGTCGCAGTTTGAATACGACGCAACGCGACTCAAGACG AGTGACTCCAACAGCGATTCTCAAAAGGAAGGACTGCGGCTGGTGCTCAAGGGTGGCAAGCATCCCCTGGACGGA CCTGTCAACGAGCGGCGTGAGCAGCGGGCCGTTGTCGAGTTTCTCTGCGACCCCAATAGGACAGGGGACGAGGGC GAGTGGGAGGCAGAAGACGAGTACGACAAGAATGCCAAGCTACGGGCTCGCGCCGATGACGATGATGGTGGCAAG GATGACGGCCAGGACAGGTCGGCACTGGAGCACCAGCTGAAGAAGGACAATGCGGCGCTCCTTTGGGAGAGCTTC GAGGATGAAAAAGACGCCAAAGTGCTGCGGCTGACTTGGCATACAAAGTATGCTTGCGAGAAGCGAGAAGACGGT GGCGGTAGCGACGACAAGGGCGACGGGAGCACAAGCAGCCATTGGGGCTTCTTTACCTGGTTTGTCGTCATCGTC TTCTTGGGCATTGCTGCATACTTGATATTTGGCTCATGGCTCAATTACAATCGATACGGGGCTAGAGGTTGGGAT CTGGTGCCACACGGCGACACCATTCGGGACATACCATATCTGATGAAGGACTGGGTCAGGCGAGTGCTCAACACT GTGCAAGGAGCAGGCAGCAGGGGAGGATATAGCGCCGTCTAG |
| Transcript | >OphauG2|5976 ATGCGCGGGCCACAGCCGTCAGCGCTTGCTCTGTCGCTGCTGCTAACACTGAAGCTGGGCGCGGCGATGCTGAGA TGCGACAACGTGCGGGTAGATGGGCATAGCTTCGACCTGTCCAAGCTCGGAGGGCCGCACTCAGTGGTGACGACG CGCTACGAGTCGTTGCCCAATGTGCACCACAACGTGACGTATACGCTCGATATTTGCAAGCCGCTCAAGAAGAGC GGCAAGGCCAAAAAGTCGGAGGAGTGCCCCAACGGGACTCGAGGTGCGTTTTTGGTGCAGCATGGACAGGAACAG GAGCCTGCAGAGCTAACCGGGACAGTGTGTGCCATTTCACGTTTTCTACAGGGCGAGACGGACGTGGTGGAGCAA GTAGTGGCGATAGCTGGCTCTCTGGAAAACGTGGGGGGGTCGCAGTTTGAATACGACGCAACGCGACTCAAGACG AGTGACTCCAACAGCGATTCTCAAAAGGAAGGACTGCGGCTGGTGCTCAAGGGTGGCAAGCATCCCCTGGACGGA CCTGTCAACGAGCGGCGTGAGCAGCGGGCCGTTGTCGAGTTTCTCTGCGACCCCAATAGGACAGGGGACGAGGGC GAGTGGGAGGCAGAAGACGAGTACGACAAGAATGCCAAGCTACGGGCTCGCGCCGATGACGATGATGGTGGCAAG GATGACGGCCAGGACAGGTCGGCACTGGAGCACCAGCTGAAGAAGGACAATGCGGCGCTCCTTTGGGAGAGCTTC GAGGATGAAAAAGACGCCAAAGTGCTGCGGCTGACTTGGCATACAAAGTATGCTTGCGAGAAGCGAGAAGACGGT GGCGGTAGCGACGACAAGGGCGACGGGAGCACAAGCAGCCATTGGGGCTTCTTTACCTGGTTTGTCGTCATCGTC TTCTTGGGCATTGCTGCATACTTGATATTTGGCTCATGGCTCAATTACAATCGATACGGGGCTAGAGGTTGGGAT CTGGTGCCACACGGCGACACCATTCGGGACATACCATATCTGATGAAGGACTGGGTCAGGCGAGTGCTCAACACT GTGCAAGGAGCAGGCAGCAGGGGAGGATATAGCGCCGTCTAG |
| Gene | >OphauG2|5976 ATGCGCGGGCCACAGCCGTCAGCGCTTGCTCTGTCGCTGCTGCTAACACTGAAGCTGGGCGCGGCGATGCTGAGA TGCGACAACGTGCGGGTAGATGGGCATAGCTTCGACCTGTCCAAGCTCGGAGGGCCGCACTCAGTGGTGACGACG CGCTACGAGTCGTTGCCCAATGTGCACCACAACGTGACGTATACGCTCGATATTTGCAAGCCGCTCAAGAAGAGC GGCAAGGCCAAAAAGTCGGAGGAGTGCCCCAACGGGACTCGAGGTGCGTTTTTGGTGCAGCATGGACAGGAACAG GAGCCTGCAGAGCTAACCGGGACAGTGTGTGCCATTTCACGTTTTCTACAGGGCGAGACGGACGTGGTGGAGCAA GTAGTGGCGATAGCTGGCTCTCTGGAAAACGTGGGGGGGTCGCAGTTTGAATACGACGCAACGCGACTCAAGACG AGTGACTCCAACAGCGATTCTCAAAAGGAAGGACTGCGGCTGGTGCTCAAGGGTGGCAAGCATCCCCTGGACGGA CCTGTCAACGAGCGGCGTGAGCAGCGGGCCGTTGTCGAGTTTCTCTGCGACCCCAATAGGACAGGGGACGAGGGC GAGTGGGAGGCAGAAGACGAGTACGACAAGAATGCCAAGCTACGGGCTCGCGCCGATGACGATGATGGTGGCAAG GATGACGGCCAGGACAGGTCGGCACTGGAGCACCAGCTGAAGAAGGACAATGCGGCGCTCCTTTGGGAGAGCTTC GAGGATGAAAAAGACGCCAAAGTGCTGCGGCTGACTTGGCATACAAAGTATGCTTGCGAGAAGCGAGAAGACGGT GGCGGTAGCGACGACAAGGGCGACGGGAGCACAAGCAGCCATTGGGGCTTCTTTACCTGGTTTGTCGTCATGTGA GTCTCTGTGGCGCATTGTAGGGATCCATGGACTGACTCAAGCTACACAGCGTCTTCTTGGGCATTGCTGCATACT TGATATTTGGCTCATGGCTCAATTACAATCGATACGGGGCTAGAGGTTGGGATCTGGTGCCACACGGCGACACCA TTCGGGACATACCATATCTGATGAAGGACTGGGTCAGGCGAGTGCTCAACACTGTGCAAGGAGCAGGCAGCAGGG GAGGATATAGCGCCGTCTAG |